RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 SYT9Q86SS6 491 aa6.55□□□□□ -1.36
VTI1B-203ENST00000554636 STAG2Q8N3U4 1231 aa6.55□□□□□ -1.36
VTI1B-203ENST00000554636 SLC30A3Q99726 388 aa6.55□□□□□ -1.36
VTI1B-203ENST00000554636 ARHGEF5Q12774 1597 aa6.55□□□□□ -1.36
VTI1B-203ENST00000554636 ADGBQ8N7X0 1667 aa6.55□□□□□ -1.36
VTI1B-203ENST00000554636 A2MP01023 1474 aa6.54□□□□□ -1.36
VTI1B-203ENST00000554636 CCDC141Q6ZP82 1450 aa6.54□□□□□ -1.36
VTI1B-203ENST00000554636 EPXP11678 715 aa6.54□□□□□ -1.36
VTI1B-203ENST00000554636 WEE1P30291 646 aa6.54□□□□□ -1.36
VTI1B-203ENST00000554636 SPEM2Q0P670 501 aa6.54□□□□□ -1.36
VTI1B-203ENST00000554636 LAMC2Q13753 1193 aa6.54□□□□□ -1.36
VTI1B-203ENST00000554636 RTN1Q16799 776 aa6.54□□□□□ -1.36
VTI1B-203ENST00000554636 FAM182BQ5T319 152 aa6.54□□□□□ -1.36
VTI1B-203ENST00000554636 ZNF468Q5VIY5 522 aaPredicted RBP6.54□□□□□ -1.36
VTI1B-203ENST00000554636 BTLAQ7Z6A9 289 aa6.54□□□□□ -1.36
VTI1B-203ENST00000554636 FCHSD1Q86WN1 690 aa6.54□□□□□ -1.36
VTI1B-203ENST00000554636 TMEM151AQ8N4L1 468 aa6.54□□□□□ -1.36
VTI1B-203ENST00000554636 CCDC82Q8N4S0 544 aa6.54□□□□□ -1.36
VTI1B-203ENST00000554636 KCTD17Q8N5Z5 321 aa6.54□□□□□ -1.36
VTI1B-203ENST00000554636 SERPINA10Q9UK55 444 aa6.54□□□□□ -1.36
VTI1B-203ENST00000554636 C3P01024 1663 aa6.54□□□□□ -1.36
VTI1B-203ENST00000554636 RTEL1-TNFRSF6BF6WH68 1400 aa6.53□□□□□ -1.36
VTI1B-203ENST00000554636 TBC1D8BQ0IIM8 1120 aa6.53□□□□□ -1.36
VTI1B-203ENST00000554636 FKBP5Q13451 457 aaPredicted RBP6.53□□□□□ -1.36
VTI1B-203ENST00000554636 DGKZQ13574 1117 aa6.53□□□□□ -1.36
VTI1B-203ENST00000554636 TMEM164Q5U3C3 297 aa6.53□□□□□ -1.36
VTI1B-203ENST00000554636 BEND7Q8N7W2 519 aaPredicted RBP6.53□□□□□ -1.36
VTI1B-203ENST00000554636 MKNK1Q9BUB5 465 aa6.53□□□□□ -1.36
VTI1B-203ENST00000554636 QTRT2Q9H974 415 aaKnown RBP6.53□□□□□ -1.36
VTI1B-203ENST00000554636 LRRC4BQ9NT99 713 aa6.53□□□□□ -1.36
VTI1B-203ENST00000554636 MAST1Q9Y2H9 1570 aa6.52□□□□□ -1.36
VTI1B-203ENST00000554636 MROH2AA6NES4 1674 aa6.52□□□□□ -1.37
VTI1B-203ENST00000554636 PREX1Q8TCU6 1659 aa6.52□□□□□ -1.37
VTI1B-203ENST00000554636 MYOM3Q5VTT5 1437 aa6.52□□□□□ -1.37
VTI1B-203ENST00000554636 PHF20L1A8MW92 1017 aa6.52□□□□□ -1.37
VTI1B-203ENST00000554636 FOXO3O43524 673 aa6.52□□□□□ -1.37
VTI1B-203ENST00000554636 CHSY3Q70JA7 882 aa6.52□□□□□ -1.37
VTI1B-203ENST00000554636 BHMTQ93088 406 aa6.52□□□□□ -1.37
VTI1B-203ENST00000554636 PBXIP1Q96AQ6 731 aa6.52□□□□□ -1.37
VTI1B-203ENST00000554636 KCNH4Q9UQ05 1017 aa6.52□□□□□ -1.37
VTI1B-203ENST00000554636 BCS1LQ9Y276 419 aa6.52□□□□□ -1.37
VTI1B-203ENST00000554636 ACIN1Q9UKV3 1341 aaKnown RBP6.51□□□□□ -1.37
VTI1B-203ENST00000554636 MIA2Q96PC5 1412 aa6.51□□□□□ -1.37
VTI1B-203ENST00000554636 CNTLNQ9NXG0 1405 aa6.51□□□□□ -1.37
VTI1B-203ENST00000554636 SRPK2P78362 688 aaKnown RBP6.51□□□□□ -1.37
VTI1B-203ENST00000554636 HIF1AQ16665 826 aa6.51□□□□□ -1.37
VTI1B-203ENST00000554636 KANK3Q6NY19 840 aa6.51□□□□□ -1.37
VTI1B-203ENST00000554636 BTBD6Q96KE9 485 aa6.51□□□□□ -1.37
VTI1B-203ENST00000554636 IGFLR1Q9H665 355 aa6.51□□□□□ -1.37
VTI1B-203ENST00000554636 C1orf115Q9H7X2 142 aa6.51□□□□□ -1.37
VTI1B-203ENST00000554636 MKL2Q9ULH7 1088 aa6.51□□□□□ -1.37
VTI1B-203ENST00000554636 SETD1BQ9UPS6 1966 aaKnown RBP6.51□□□□□ -1.37
VTI1B-203ENST00000554636 CLTCQ00610 1675 aaKnown RBP6.5□□□□□ -1.37
VTI1B-203ENST00000554636 TGFBR3LH3BV60 316 aa6.5□□□□□ -1.37
VTI1B-203ENST00000554636 ATG7O95352 703 aa6.5□□□□□ -1.37
VTI1B-203ENST00000554636 CEBPAP49715 358 aaPredicted RBP6.5□□□□□ -1.37
VTI1B-203ENST00000554636 ELOAQ14241 798 aaKnown RBP6.5□□□□□ -1.37
VTI1B-203ENST00000554636 SWI5Q1ZZU3 235 aa6.5□□□□□ -1.37
VTI1B-203ENST00000554636 USP20Q9Y2K6 914 aa6.5□□□□□ -1.37
VTI1B-203ENST00000554636 PTPN23Q9H3S7 1636 aa6.5□□□□□ -1.37
VTI1B-203ENST00000554636 CROCC2H7BZ55 1655 aa6.49□□□□□ -1.37
VTI1B-203ENST00000554636 TCOF1Q13428 1488 aaKnown RBP6.49□□□□□ -1.37
VTI1B-203ENST00000554636 DHX29Q7Z478 1369 aaKnown RBP6.49□□□□□ -1.37
VTI1B-203ENST00000554636 IDH3AP50213 366 aa6.49□□□□□ -1.37
VTI1B-203ENST00000554636 NEUROD1Q13562 356 aa6.49□□□□□ -1.37
VTI1B-203ENST00000554636 OCLNQ16625 522 aa6.49□□□□□ -1.37
VTI1B-203ENST00000554636 GPAT2Q6NUI2 795 aa6.49□□□□□ -1.37
VTI1B-203ENST00000554636 KRT25Q7Z3Z0 450 aa6.49□□□□□ -1.37
VTI1B-203ENST00000554636 SUV39H2Q9H5I1 410 aa6.49□□□□□ -1.37
VTI1B-203ENST00000554636 AVENQ9NQS1 362 aaPredicted RBP6.49□□□□□ -1.37
VTI1B-203ENST00000554636 LRFN2Q9ULH4 789 aa6.49□□□□□ -1.37
VTI1B-203ENST00000554636 FAM135AQ9P2D6 1515 aa6.49□□□□□ -1.37
VTI1B-203ENST00000554636 UHRF1BP1Q6BDS2 1440 aa6.49□□□□□ -1.37
VTI1B-203ENST00000554636 FGD6Q6ZV73 1430 aa6.49□□□□□ -1.37
VTI1B-203ENST00000554636 SHANK2Q9UPX8 1470 aa6.48□□□□□ -1.37
VTI1B-203ENST00000554636 RNF17Q9BXT8 1623 aaKnown RBP6.48□□□□□ -1.37
VTI1B-203ENST00000554636 ELOA3CA0A087WX78 387 aaPredicted RBP6.48□□□□□ -1.37
VTI1B-203ENST00000554636 ELOA3DA6NLF2 546 aaPredicted RBP6.48□□□□□ -1.37
VTI1B-203ENST00000554636 HOXB4P17483 251 aaPredicted RBP6.48□□□□□ -1.37
VTI1B-203ENST00000554636 HSPA2P54652 639 aa6.48□□□□□ -1.37
VTI1B-203ENST00000554636 NAA30Q147X3 362 aaPredicted RBP6.48□□□□□ -1.37
VTI1B-203ENST00000554636 ELOA3BQ3SY89 546 aa6.48□□□□□ -1.37
VTI1B-203ENST00000554636 CAPN12Q6ZSI9 719 aa6.48□□□□□ -1.37
VTI1B-203ENST00000554636 ELOA3Q8NG57 546 aa6.48□□□□□ -1.37
VTI1B-203ENST00000554636 DCAF5Q96JK2 942 aa6.48□□□□□ -1.37
VTI1B-203ENST00000554636 PNMA5Q96PV4 448 aa6.48□□□□□ -1.37
VTI1B-203ENST00000554636 ABCC5O15440 1437 aa6.48□□□□□ -1.37
VTI1B-203ENST00000554636 NPATQ14207 1427 aa6.48□□□□□ -1.37
VTI1B-203ENST00000554636 PTPRKQ15262 1439 aa6.48□□□□□ -1.37
VTI1B-203ENST00000554636 DNMT1P26358 1616 aaKnown RBP6.47□□□□□ -1.37
VTI1B-203ENST00000554636 MROH1Q8NDA8 1641 aa6.47□□□□□ -1.37
VTI1B-203ENST00000554636 MYO3AQ8NEV4 1616 aa6.47□□□□□ -1.37
VTI1B-203ENST00000554636 EIF2AK4Q9P2K8 1649 aaKnown RBP6.47□□□□□ -1.37
VTI1B-203ENST00000554636 ZMYM3Q14202 1370 aa6.47□□□□□ -1.37
VTI1B-203ENST00000554636 KDM5DQ9BY66 1539 aa6.47□□□□□ -1.37
VTI1B-203ENST00000554636 ZNF142P52746 1687 aaPredicted RBP6.47□□□□□ -1.37
VTI1B-203ENST00000554636 SIN3BO75182 1162 aa6.47□□□□□ -1.37
VTI1B-203ENST00000554636 NFKB1P19838 968 aa6.47□□□□□ -1.37
VTI1B-203ENST00000554636 ALAS2P22557 587 aa6.47□□□□□ -1.37
VTI1B-203ENST00000554636 ADH7P40394 386 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms