RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 UQCRHLA0A096LP55 91 aa17.24■□□□□ 0.35
ACTN1-211ENST00000553882 UQCRHP07919 91 aa17.24■□□□□ 0.35
ACTN1-211ENST00000553882 DNTTIP2Q5QJE6 756 aaKnown RBP17.24■□□□□ 0.35
ACTN1-211ENST00000553882 TOM1L2Q6ZVM7 507 aa17.24■□□□□ 0.35
ACTN1-211ENST00000553882 PAG1Q9NWQ8 432 aa17.24■□□□□ 0.35
ACTN1-211ENST00000553882 H7C1W4 665 aa17.24■□□□□ 0.35
ACTN1-211ENST00000553882 MAP3K11Q16584 847 aa17.24■□□□□ 0.35
ACTN1-211ENST00000553882 LEO1Q8WVC0 666 aaPredicted RBP17.24■□□□□ 0.35
ACTN1-211ENST00000553882 SCAND2PQ9GZW5 306 aaPredicted RBP17.24■□□□□ 0.35
ACTN1-211ENST00000553882 H3BQV1 296 aa17.23■□□□□ 0.35
ACTN1-211ENST00000553882 CEBPZQ03701 1054 aaKnown RBP17.23■□□□□ 0.35
ACTN1-211ENST00000553882 SCRN1Q12765 414 aa17.23■□□□□ 0.35
ACTN1-211ENST00000553882 IFFO2Q5TF58 517 aa17.23■□□□□ 0.35
ACTN1-211ENST00000553882 SPC24Q8NBT2 197 aa17.23■□□□□ 0.35
ACTN1-211ENST00000553882 NAP1L2Q9ULW6 460 aaPredicted RBP17.23■□□□□ 0.35
ACTN1-211ENST00000553882 ELP1O95163 1332 aa17.23■□□□□ 0.35
ACTN1-211ENST00000553882 SPATA31A3Q5VYP0 1347 aa17.23■□□□□ 0.35
ACTN1-211ENST00000553882 CADPS2Q86UW7 1296 aa17.22■□□□□ 0.35
ACTN1-211ENST00000553882 CCDC85AQ96PX6 553 aaPredicted RBP17.22■□□□□ 0.35
ACTN1-211ENST00000553882 TNMDQ9H2S6 317 aa17.22■□□□□ 0.35
ACTN1-211ENST00000553882 PRDM11Q9NQV5 511 aa17.22■□□□□ 0.35
ACTN1-211ENST00000553882 PDIA4P13667 645 aaKnown RBP17.22■□□□□ 0.35
ACTN1-211ENST00000553882 CHST3Q7LGC8 479 aa17.22■□□□□ 0.35
ACTN1-211ENST00000553882 ZCRB1Q8TBF4 217 aaKnown RBP17.22■□□□□ 0.35
ACTN1-211ENST00000553882 BICD2Q8TD16 824 aa17.22■□□□□ 0.35
ACTN1-211ENST00000553882 PUS3Q9BZE2 481 aaKnown RBP17.22■□□□□ 0.35
ACTN1-211ENST00000553882 FAM13BQ9NYF5 915 aa17.22■□□□□ 0.35
ACTN1-211ENST00000553882 TYRO3Q06418 890 aa17.21■□□□□ 0.35
ACTN1-211ENST00000553882 APOBRQ0VD83 1088 aa17.21■□□□□ 0.35
ACTN1-211ENST00000553882 LUZP1Q86V48 1076 aa17.21■□□□□ 0.35
ACTN1-211ENST00000553882 GLI3P10071 1580 aa17.21■□□□□ 0.35
ACTN1-211ENST00000553882 SH3TC1Q8TE82 1336 aa17.21■□□□□ 0.35
ACTN1-211ENST00000553882 NR1I2O75469 434 aa17.21■□□□□ 0.35
ACTN1-211ENST00000553882 CCT2P78371 535 aaKnown RBP17.21■□□□□ 0.35
ACTN1-211ENST00000553882 PGBD1Q96JS3 809 aa17.21■□□□□ 0.35
ACTN1-211ENST00000553882 A0A1B0GUL7 405 aa17.2■□□□□ 0.34
ACTN1-211ENST00000553882 TERF1P54274 439 aa17.2■□□□□ 0.34
ACTN1-211ENST00000553882 MRVI1Q9Y6F6 885 aa17.2■□□□□ 0.34
ACTN1-211ENST00000553882 RFX7Q2KHR2 1363 aa17.2■□□□□ 0.34
ACTN1-211ENST00000553882 PKD1L3Q7Z443 1732 aa17.2■□□□□ 0.34
ACTN1-211ENST00000553882 PCDH11XQ9BZA7 1347 aa17.2■□□□□ 0.34
ACTN1-211ENST00000553882 PCDH11YQ9BZA8 1340 aa17.2■□□□□ 0.34
ACTN1-211ENST00000553882 IFIT1P09914 478 aaKnown RBP17.2■□□□□ 0.34
ACTN1-211ENST00000553882 PIBF1Q8WXW3 757 aa17.2■□□□□ 0.34
ACTN1-211ENST00000553882 NCOA5Q9HCD5 579 aaKnown RBP17.2■□□□□ 0.34
ACTN1-211ENST00000553882 IL15P40933 162 aaPredicted RBP17.19■□□□□ 0.34
ACTN1-211ENST00000553882 FKBP4Q02790 459 aaKnown RBP eCLIP17.19■□□□□ 0.34
ACTN1-211ENST00000553882 RESTQ13127 1097 aa17.19■□□□□ 0.34
ACTN1-211ENST00000553882 FAM200AQ8TCP9 573 aa17.19■□□□□ 0.34
ACTN1-211ENST00000553882 FTOQ9C0B1 505 aaKnown RBP eCLIP17.19■□□□□ 0.34
ACTN1-211ENST00000553882 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.19■□□□□ 0.34
ACTN1-211ENST00000553882 EYA2O00167 538 aa17.19■□□□□ 0.34
ACTN1-211ENST00000553882 HSPD1P10809 573 aaKnown RBP17.19■□□□□ 0.34
ACTN1-211ENST00000553882 NOLC1Q14978 699 aaKnown RBP eCLIP17.19■□□□□ 0.34
ACTN1-211ENST00000553882 ANO6Q4KMQ2 910 aa17.19■□□□□ 0.34
ACTN1-211ENST00000553882 DHX32Q7L7V1 743 aaKnown RBP17.19■□□□□ 0.34
ACTN1-211ENST00000553882 TTLL5Q6EMB2 1281 aa17.18■□□□□ 0.34
ACTN1-211ENST00000553882 STRCP1A6NGW2 1772 aa17.18■□□□□ 0.34
ACTN1-211ENST00000553882 PALLDQ8WX93 1383 aa17.18■□□□□ 0.34
ACTN1-211ENST00000553882 SASS6Q6UVJ0 657 aa17.18■□□□□ 0.34
ACTN1-211ENST00000553882 MAST3O60307 1309 aa17.18■□□□□ 0.34
ACTN1-211ENST00000553882 ZMYM1Q5SVZ6 1142 aa17.17■□□□□ 0.34
ACTN1-211ENST00000553882 CCDC191Q8NCU4 936 aa17.17■□□□□ 0.34
ACTN1-211ENST00000553882 UBE2Q2Q8WVN8 375 aa17.17■□□□□ 0.34
ACTN1-211ENST00000553882 STRN4Q9NRL3 753 aa17.17■□□□□ 0.34
ACTN1-211ENST00000553882 HELLSQ9NRZ9 838 aa17.17■□□□□ 0.34
ACTN1-211ENST00000553882 WDR17Q8IZU2 1322 aa17.17■□□□□ 0.34
ACTN1-211ENST00000553882 E7EWF7 191 aa17.17■□□□□ 0.34
ACTN1-211ENST00000553882 GUCY1B3Q02153 619 aa17.17■□□□□ 0.34
ACTN1-211ENST00000553882 NSUN7Q8NE18 718 aaKnown RBP17.17■□□□□ 0.34
ACTN1-211ENST00000553882 CPDO75976 1380 aa17.17■□□□□ 0.34
ACTN1-211ENST00000553882 LAMB4A4D0S4 1761 aa17.17■□□□□ 0.34
ACTN1-211ENST00000553882 PTPDC1A2A3K4 754 aa17.17■□□□□ 0.34
ACTN1-211ENST00000553882 PFKFB2O60825 505 aa17.17■□□□□ 0.34
ACTN1-211ENST00000553882 CTDNEP1O95476 244 aa17.17■□□□□ 0.34
ACTN1-211ENST00000553882 HSP90AB3PQ58FF7 597 aa17.17■□□□□ 0.34
ACTN1-211ENST00000553882 DDX19AQ9NUU7 478 aaKnown RBP17.17■□□□□ 0.34
ACTN1-211ENST00000553882 ABCC6O95255 1503 aa17.16■□□□□ 0.34
ACTN1-211ENST00000553882 M0R2C6 588 aa17.16■□□□□ 0.34
ACTN1-211ENST00000553882 HMGB1P09429 215 aaKnown RBP17.16■□□□□ 0.34
ACTN1-211ENST00000553882 HSPA2P54652 639 aa17.16■□□□□ 0.34
ACTN1-211ENST00000553882 DSCC1Q9BVC3 393 aa17.16■□□□□ 0.34
ACTN1-211ENST00000553882 KCNF1Q9H3M0 494 aa17.16■□□□□ 0.34
ACTN1-211ENST00000553882 CLSTN2Q9H4D0 955 aa17.16■□□□□ 0.34
ACTN1-211ENST00000553882 CBX8Q9HC52 389 aa17.16■□□□□ 0.34
ACTN1-211ENST00000553882 DCCP43146 1447 aa17.16■□□□□ 0.34
ACTN1-211ENST00000553882 ADORA1P30542 326 aa17.16■□□□□ 0.34
ACTN1-211ENST00000553882 HAND2P61296 217 aa17.16■□□□□ 0.34
ACTN1-211ENST00000553882 GORABQ5T7V8 394 aa17.16■□□□□ 0.34
ACTN1-211ENST00000553882 SMARCC2Q8TAQ2 1214 aa17.16■□□□□ 0.34
ACTN1-211ENST00000553882 ERVV-2B6SEH9 535 aa17.15■□□□□ 0.34
ACTN1-211ENST00000553882 RNF113AO15541 343 aaKnown RBP17.15■□□□□ 0.34
ACTN1-211ENST00000553882 BRINP3Q76B58 766 aa17.15■□□□□ 0.34
ACTN1-211ENST00000553882 OSBP2Q969R2 916 aa17.15■□□□□ 0.34
ACTN1-211ENST00000553882 CEP126Q9P2H0 1117 aa17.15■□□□□ 0.34
ACTN1-211ENST00000553882 CCDC57Q2TAC2 916 aa17.15■□□□□ 0.34
ACTN1-211ENST00000553882 FAM89AQ96GI7 184 aa17.15■□□□□ 0.34
ACTN1-211ENST00000553882 DNAJC25Q9H1X3 360 aa17.15■□□□□ 0.34
ACTN1-211ENST00000553882 ZSCAN16Q9H4T2 348 aaPredicted RBP17.15■□□□□ 0.34
ACTN1-211ENST00000553882 GPR108Q9NPR9 543 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms