RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 SCRN1Q12765 414 aa13.25□□□□□ -0.29
NRDE2-202ENST00000553409 TSGA10IPQ3SY00 556 aa13.25□□□□□ -0.29
NRDE2-202ENST00000553409 NAT10Q9H0A0 1025 aaKnown RBP13.25□□□□□ -0.29
NRDE2-202ENST00000553409 ITSN1Q15811 1721 aa13.25□□□□□ -0.29
NRDE2-202ENST00000553409 CACNA1FO60840 1977 aa13.25□□□□□ -0.29
NRDE2-202ENST00000553409 USP6P35125 1406 aa13.25□□□□□ -0.29
NRDE2-202ENST00000553409 TAF5LO75529 589 aa13.25□□□□□ -0.29
NRDE2-202ENST00000553409 SASH1O94885 1247 aa13.25□□□□□ -0.29
NRDE2-202ENST00000553409 ETF1P62495 437 aaKnown RBP13.25□□□□□ -0.29
NRDE2-202ENST00000553409 TEX35Q5T0J7 233 aa13.25□□□□□ -0.29
NRDE2-202ENST00000553409 ERC1Q8IUD2 1116 aa13.25□□□□□ -0.29
NRDE2-202ENST00000553409 CCDC150Q8NCX0 1101 aa13.25□□□□□ -0.29
NRDE2-202ENST00000553409 ARGLU1Q9NWB6 273 aaPredicted RBP13.25□□□□□ -0.29
NRDE2-202ENST00000553409 HMG20BQ9P0W2 317 aa13.25□□□□□ -0.29
NRDE2-202ENST00000553409 MED23Q9ULK4 1368 aa13.24□□□□□ -0.29
NRDE2-202ENST00000553409 SBNO1A3KN83 1393 aa13.24□□□□□ -0.29
NRDE2-202ENST00000553409 PPFIA3O75145 1194 aa13.24□□□□□ -0.29
NRDE2-202ENST00000553409 ME1P48163 572 aa13.24□□□□□ -0.29
NRDE2-202ENST00000553409 DPCR1Q3MIW9 517 aa13.24□□□□□ -0.29
NRDE2-202ENST00000553409 EDC3Q96F86 508 aaKnown RBP13.24□□□□□ -0.29
NRDE2-202ENST00000553409 NEK1Q96PY6 1258 aa13.24□□□□□ -0.29
NRDE2-202ENST00000553409 EPC1Q9H2F5 836 aa13.24□□□□□ -0.29
NRDE2-202ENST00000553409 N4BP2Q86UW6 1770 aaPredicted RBP13.24□□□□□ -0.29
NRDE2-202ENST00000553409 PLEKHG3A1L390 1219 aa13.24□□□□□ -0.29
NRDE2-202ENST00000553409 FANCGO15287 622 aa13.24□□□□□ -0.29
NRDE2-202ENST00000553409 NUTM2GQ5VZR2 741 aa13.24□□□□□ -0.29
NRDE2-202ENST00000553409 NFATC2IPQ8NCF5 419 aa13.24□□□□□ -0.29
NRDE2-202ENST00000553409 SMARCE1Q969G3 411 aa13.24□□□□□ -0.29
NRDE2-202ENST00000553409 FMNL2Q96PY5 1086 aa13.24□□□□□ -0.29
NRDE2-202ENST00000553409 SDF4Q9BRK5 362 aa13.24□□□□□ -0.29
NRDE2-202ENST00000553409 C9orf78Q9NZ63 289 aaPredicted RBP13.24□□□□□ -0.29
NRDE2-202ENST00000553409 TPM4P67936 248 aa13.23□□□□□ -0.29
NRDE2-202ENST00000553409 TSPYL1Q9H0U9 437 aa13.23□□□□□ -0.29
NRDE2-202ENST00000553409 SASH3O75995 380 aa13.23□□□□□ -0.29
NRDE2-202ENST00000553409 BABAM1Q9NWV8 329 aa13.23□□□□□ -0.29
NRDE2-202ENST00000553409 MNS1Q8NEH6 495 aa13.23□□□□□ -0.29
NRDE2-202ENST00000553409 SMARCC2Q8TAQ2 1214 aa13.23□□□□□ -0.29
NRDE2-202ENST00000553409 A0A1B0GVL5 298 aa13.22□□□□□ -0.29
NRDE2-202ENST00000553409 TADA3O75528 432 aa13.22□□□□□ -0.29
NRDE2-202ENST00000553409 URI1O94763 535 aaPredicted RBP13.22□□□□□ -0.29
NRDE2-202ENST00000553409 GUCY1B3Q02153 619 aa13.22□□□□□ -0.29
NRDE2-202ENST00000553409 KRBA2Q6ZNG9 492 aa13.22□□□□□ -0.29
NRDE2-202ENST00000553409 SIRT1Q96EB6 747 aa13.22□□□□□ -0.29
NRDE2-202ENST00000553409 CARD6Q9BX69 1037 aa13.22□□□□□ -0.29
NRDE2-202ENST00000553409 KCNQ3O43525 872 aa13.22□□□□□ -0.29
NRDE2-202ENST00000553409 KCNJ6P48051 423 aa13.22□□□□□ -0.29
NRDE2-202ENST00000553409 EIF4A1P60842 406 aaKnown RBP13.22□□□□□ -0.29
NRDE2-202ENST00000553409 TRIM65Q6PJ69 517 aa13.22□□□□□ -0.29
NRDE2-202ENST00000553409 FMR1NBQ8N0W7 255 aaPredicted RBP13.22□□□□□ -0.29
NRDE2-202ENST00000553409 TXLNBQ8N3L3 684 aa13.22□□□□□ -0.29
NRDE2-202ENST00000553409 NSUN7Q8NE18 718 aaKnown RBP13.22□□□□□ -0.29
NRDE2-202ENST00000553409 UBXN6Q9BZV1 441 aa13.22□□□□□ -0.29
NRDE2-202ENST00000553409 SIL1Q9H173 461 aa13.22□□□□□ -0.29
NRDE2-202ENST00000553409 COL15A1P39059 1388 aa13.22□□□□□ -0.29
NRDE2-202ENST00000553409 NEO1Q92859 1461 aa13.22□□□□□ -0.29
NRDE2-202ENST00000553409 CHGBP05060 677 aa13.22□□□□□ -0.29
NRDE2-202ENST00000553409 CWF19L2Q2TBE0 894 aaKnown RBP13.22□□□□□ -0.29
NRDE2-202ENST00000553409 USPL1Q5W0Q7 1092 aa13.22□□□□□ -0.29
NRDE2-202ENST00000553409 NAA16Q6N069 864 aaPredicted RBP13.22□□□□□ -0.29
NRDE2-202ENST00000553409 PLPPR3Q6T4P5 718 aa13.22□□□□□ -0.29
NRDE2-202ENST00000553409 CHMP4AQ9BY43 222 aa13.22□□□□□ -0.29
NRDE2-202ENST00000553409 LRRC37A3O60309 1634 aa13.21□□□□□ -0.29
NRDE2-202ENST00000553409 CTDNEP1O95476 244 aa13.21□□□□□ -0.29
NRDE2-202ENST00000553409 TBC1D8O95759 1140 aa13.21□□□□□ -0.29
NRDE2-202ENST00000553409 OAS2P29728 719 aaKnown RBP13.21□□□□□ -0.29
NRDE2-202ENST00000553409 KRT32Q14532 448 aa13.21□□□□□ -0.29
NRDE2-202ENST00000553409 SEC62Q99442 399 aaKnown RBP13.21□□□□□ -0.29
NRDE2-202ENST00000553409 PCDHA7Q9UN72 937 aa13.21□□□□□ -0.29
NRDE2-202ENST00000553409 PHLPP2Q6ZVD8 1323 aa13.21□□□□□ -0.29
NRDE2-202ENST00000553409 ROBO2Q9HCK4 1378 aa13.21□□□□□ -0.29
NRDE2-202ENST00000553409 BIN1O00499 593 aa13.21□□□□□ -0.3
NRDE2-202ENST00000553409 TUBB4AP04350 444 aa13.21□□□□□ -0.3
NRDE2-202ENST00000553409 G3BP1Q13283 466 aaKnown RBP eCLIP13.21□□□□□ -0.3
NRDE2-202ENST00000553409 MUM1L1Q5H9M0 696 aa13.21□□□□□ -0.3
NRDE2-202ENST00000553409 LTV1Q96GA3 475 aaPredicted RBP13.21□□□□□ -0.3
NRDE2-202ENST00000553409 KIAA1468Q9P260 1216 aa13.21□□□□□ -0.3
NRDE2-202ENST00000553409 NRDCO43847 1150 aa13.2□□□□□ -0.3
NRDE2-202ENST00000553409 CCDC129Q6ZRS4 1044 aa13.2□□□□□ -0.3
NRDE2-202ENST00000553409 ILDR1Q86SU0 546 aaPredicted RBP13.2□□□□□ -0.3
NRDE2-202ENST00000553409 ZNF396Q96N95 335 aaPredicted RBP13.2□□□□□ -0.3
NRDE2-202ENST00000553409 PTPDC1A2A3K4 754 aa13.2□□□□□ -0.3
NRDE2-202ENST00000553409 ALDH1L1O75891 902 aa13.2□□□□□ -0.3
NRDE2-202ENST00000553409 NDUFA8P51970 172 aa13.2□□□□□ -0.3
NRDE2-202ENST00000553409 MRPS27Q92552 414 aaKnown RBP13.2□□□□□ -0.3
NRDE2-202ENST00000553409 CCDC34Q96HJ3 373 aa13.2□□□□□ -0.3
NRDE2-202ENST00000553409 MAP3K2Q9Y2U5 619 aa13.2□□□□□ -0.3
NRDE2-202ENST00000553409 JCADQ9P266 1359 aa13.2□□□□□ -0.3
NRDE2-202ENST00000553409 NRXN3Q9Y4C0 1643 aa13.2□□□□□ -0.3
NRDE2-202ENST00000553409 CYP21A2P08686 494 aa13.2□□□□□ -0.3
NRDE2-202ENST00000553409 EVCP57679 992 aa13.2□□□□□ -0.3
NRDE2-202ENST00000553409 CCT2P78371 535 aaKnown RBP13.2□□□□□ -0.3
NRDE2-202ENST00000553409 ZRSR1Q15695 479 aaKnown RBP13.2□□□□□ -0.3
NRDE2-202ENST00000553409 PARP3Q9Y6F1 533 aa13.2□□□□□ -0.3
NRDE2-202ENST00000553409 EFCAB8A8MWE9 144 aa13.19□□□□□ -0.3
NRDE2-202ENST00000553409 PFKFB2O60825 505 aa13.19□□□□□ -0.3
NRDE2-202ENST00000553409 LMOD1P29536 600 aaPredicted RBP13.19□□□□□ -0.3
NRDE2-202ENST00000553409 SMC1AQ14683 1233 aaKnown RBP13.19□□□□□ -0.3
NRDE2-202ENST00000553409 NCAPHQ15003 741 aa13.19□□□□□ -0.3
NRDE2-202ENST00000553409 USHBP1Q8N6Y0 703 aa13.19□□□□□ -0.3
NRDE2-202ENST00000553409 KAZALD1Q96I82 304 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms