RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 TBC1D16Q8TBP0 767 aa11.79□□□□□ -0.52
UBE2N-203ENST00000549490 ZNF428Q96B54 188 aa11.79□□□□□ -0.52
UBE2N-203ENST00000549490 EYA3Q99504 573 aa11.79□□□□□ -0.52
UBE2N-203ENST00000549490 SCAF8Q9UPN6 1271 aaKnown RBP11.79□□□□□ -0.52
UBE2N-203ENST00000549490 TCIRG1Q13488 830 aa11.78□□□□□ -0.52
UBE2N-203ENST00000549490 PRAMEF18Q5VWM3 479 aa11.78□□□□□ -0.52
UBE2N-203ENST00000549490 COPS6Q7L5N1 327 aa11.78□□□□□ -0.52
UBE2N-203ENST00000549490 CFHR5Q9BXR6 569 aa11.78□□□□□ -0.52
UBE2N-203ENST00000549490 HTTP42858 3142 aa11.77□□□□□ -0.53
UBE2N-203ENST00000549490 AIMP1Q12904 312 aaKnown RBP11.77□□□□□ -0.53
UBE2N-203ENST00000549490 MKRN3Q13064 507 aaKnown RBP11.77□□□□□ -0.53
UBE2N-203ENST00000549490 SF3B3Q15393 1217 aaKnown RBP11.77□□□□□ -0.53
UBE2N-203ENST00000549490 RSBN1LQ6PCB5 846 aaPredicted RBP11.77□□□□□ -0.53
UBE2N-203ENST00000549490 AGBL3Q8NEM8 1001 aa11.77□□□□□ -0.53
UBE2N-203ENST00000549490 XAGE3Q8WTP9 111 aa11.77□□□□□ -0.53
UBE2N-203ENST00000549490 PCGF6Q9BYE7 350 aa11.77□□□□□ -0.53
UBE2N-203ENST00000549490 ZC3H12CQ9C0D7 883 aaKnown RBP11.77□□□□□ -0.53
UBE2N-203ENST00000549490 POLR2AP24928 1970 aaKnown RBP11.77□□□□□ -0.53
UBE2N-203ENST00000549490 PITPNM2Q9BZ72 1349 aa11.77□□□□□ -0.53
UBE2N-203ENST00000549490 PPP2R1AP30153 589 aa11.76□□□□□ -0.53
UBE2N-203ENST00000549490 SREBF2Q12772 1141 aa11.76□□□□□ -0.53
UBE2N-203ENST00000549490 TRIM26Q12899 539 aaPredicted RBP11.76□□□□□ -0.53
UBE2N-203ENST00000549490 INTS3Q68E01 1043 aaKnown RBP11.76□□□□□ -0.53
UBE2N-203ENST00000549490 GMLQ99445 158 aa11.76□□□□□ -0.53
UBE2N-203ENST00000549490 MYOZ2Q9NPC6 264 aa11.76□□□□□ -0.53
UBE2N-203ENST00000549490 PAPPA2Q9BXP8 1791 aa11.76□□□□□ -0.53
UBE2N-203ENST00000549490 G3V3G9 751 aa11.75□□□□□ -0.53
UBE2N-203ENST00000549490 USP17L8P0C7I0 530 aa11.75□□□□□ -0.53
UBE2N-203ENST00000549490 RPS8P62241 208 aaKnown RBP11.75□□□□□ -0.53
UBE2N-203ENST00000549490 TTLL12Q14166 644 aaPredicted RBP11.75□□□□□ -0.53
UBE2N-203ENST00000549490 DCAF8Q5TAQ9 597 aa11.75□□□□□ -0.53
UBE2N-203ENST00000549490 OTOP1Q7RTM1 612 aa11.75□□□□□ -0.53
UBE2N-203ENST00000549490 FAM89AQ96GI7 184 aa11.75□□□□□ -0.53
UBE2N-203ENST00000549490 TSPYL4Q9UJ04 414 aa11.75□□□□□ -0.53
UBE2N-203ENST00000549490 TRIM17Q9Y577 477 aa11.75□□□□□ -0.53
UBE2N-203ENST00000549490 LRRC37AA6NMS7 1700 aa11.74□□□□□ -0.53
UBE2N-203ENST00000549490 ANKRD36CQ5JPF3 1778 aa11.74□□□□□ -0.53
UBE2N-203ENST00000549490 KDM3BQ7LBC6 1761 aa11.74□□□□□ -0.53
UBE2N-203ENST00000549490 EN2P19622 333 aaPredicted RBP11.74□□□□□ -0.53
UBE2N-203ENST00000549490 NFE2L2Q16236 605 aa11.74□□□□□ -0.53
UBE2N-203ENST00000549490 NECTIN2Q92692 538 aa11.74□□□□□ -0.53
UBE2N-203ENST00000549490 PODXL2Q9NZ53 605 aa11.74□□□□□ -0.53
UBE2N-203ENST00000549490 COLQQ9Y215 455 aaPredicted RBP11.74□□□□□ -0.53
UBE2N-203ENST00000549490 ZNF609O15014 1411 aa11.74□□□□□ -0.53
UBE2N-203ENST00000549490 LAMB2P55268 1798 aa11.74□□□□□ -0.53
UBE2N-203ENST00000549490 UFL1O94874 794 aa11.73□□□□□ -0.53
UBE2N-203ENST00000549490 COL4A1P02462 1669 aa11.73□□□□□ -0.53
UBE2N-203ENST00000549490 NEFMP07197 916 aa11.73□□□□□ -0.53
UBE2N-203ENST00000549490 PTPN12Q05209 780 aaKnown RBP11.73□□□□□ -0.53
UBE2N-203ENST00000549490 NBPF9Q3BBW0 867 aa11.73□□□□□ -0.53
UBE2N-203ENST00000549490 PLEKHF1Q96S99 279 aa11.73□□□□□ -0.53
UBE2N-203ENST00000549490 TAF1P21675 1872 aa11.72□□□□□ -0.53
UBE2N-203ENST00000549490 ALDH1A1P00352 501 aa11.72□□□□□ -0.53
UBE2N-203ENST00000549490 NF2P35240 595 aa11.72□□□□□ -0.53
UBE2N-203ENST00000549490 RTL5Q5HYW3 569 aaPredicted RBP11.72□□□□□ -0.53
UBE2N-203ENST00000549490 SPRYD7Q5W111 196 aa11.72□□□□□ -0.53
UBE2N-203ENST00000549490 ISCA1Q9BUE6 129 aa11.72□□□□□ -0.53
UBE2N-203ENST00000549490 ANKIB1Q9P2G1 1089 aa11.72□□□□□ -0.53
UBE2N-203ENST00000549490 GGA1Q9UJY5 639 aa11.72□□□□□ -0.53
UBE2N-203ENST00000549490 USP17L3A6NCW0 530 aa11.71□□□□□ -0.53
UBE2N-203ENST00000549490 USP17L4A6NCW7 530 aa11.71□□□□□ -0.53
UBE2N-203ENST00000549490 ATP5J2-PTCD1G3V325 749 aa11.71□□□□□ -0.53
UBE2N-203ENST00000549490 PRKG1Q13976 671 aa11.71□□□□□ -0.53
UBE2N-203ENST00000549490 LDLRAD1Q5T700 205 aa11.71□□□□□ -0.53
UBE2N-203ENST00000549490 USP17L1Q7RTZ2 530 aa11.71□□□□□ -0.53
UBE2N-203ENST00000549490 ARMC5Q96C12 935 aa11.71□□□□□ -0.53
UBE2N-203ENST00000549490 SEC31BQ9NQW1 1179 aa11.71□□□□□ -0.53
UBE2N-203ENST00000549490 PTPN22Q9Y2R2 807 aa11.71□□□□□ -0.53
UBE2N-203ENST00000549490 SZT2Q5T011 3432 aa11.71□□□□□ -0.54
UBE2N-203ENST00000549490 SCN9AQ15858 1988 aa11.7□□□□□ -0.54
UBE2N-203ENST00000549490 WNT10BO00744 389 aa11.7□□□□□ -0.54
UBE2N-203ENST00000549490 IRS4O14654 1257 aaPredicted RBP11.7□□□□□ -0.54
UBE2N-203ENST00000549490 ARMC9Q7Z3E5 817 aa11.7□□□□□ -0.54
UBE2N-203ENST00000549490 IFNL1Q8IU54 200 aa11.7□□□□□ -0.54
UBE2N-203ENST00000549490 PLBD2Q8NHP8 589 aa11.7□□□□□ -0.54
UBE2N-203ENST00000549490 TRIOBPQ9H2D6 2365 aa11.7□□□□□ -0.54
UBE2N-203ENST00000549490 CENPFP49454 3210 aa11.69□□□□□ -0.54
UBE2N-203ENST00000549490 MANSC4A6NHS7 340 aaPredicted RBP11.69□□□□□ -0.54
UBE2N-203ENST00000549490 INHBEP58166 350 aa11.69□□□□□ -0.54
UBE2N-203ENST00000549490 ANKRD13DQ6ZTN6 518 aa11.69□□□□□ -0.54
UBE2N-203ENST00000549490 PODNQ7Z5L7 613 aa11.69□□□□□ -0.54
UBE2N-203ENST00000549490 CD99L2Q8TCZ2 262 aa11.69□□□□□ -0.54
UBE2N-203ENST00000549490 MXD3Q9BW11 206 aa11.69□□□□□ -0.54
UBE2N-203ENST00000549490 KIAA0100Q14667 2235 aaKnown RBP11.69□□□□□ -0.54
UBE2N-203ENST00000549490 CEP290O15078 2479 aa11.69□□□□□ -0.54
UBE2N-203ENST00000549490 BRCA2P51587 3418 aa11.68□□□□□ -0.54
UBE2N-203ENST00000549490 WTIPA6NIX2 430 aaPredicted RBP11.68□□□□□ -0.54
UBE2N-203ENST00000549490 IGF2BP3O00425 579 aaKnown RBP eCLIP11.68□□□□□ -0.54
UBE2N-203ENST00000549490 TRIM28Q13263 835 aaKnown RBP11.68□□□□□ -0.54
UBE2N-203ENST00000549490 OTUD5Q96G74 571 aa11.68□□□□□ -0.54
UBE2N-203ENST00000549490 ERO1AQ96HE7 468 aa11.68□□□□□ -0.54
UBE2N-203ENST00000549490 BABAM1Q9NWV8 329 aa11.68□□□□□ -0.54
UBE2N-203ENST00000549490 CHPF2Q9P2E5 772 aa11.68□□□□□ -0.54
UBE2N-203ENST00000549490 ANGEL1Q9UNK9 670 aaKnown RBP11.68□□□□□ -0.54
UBE2N-203ENST00000549490 FZD1Q9UP38 647 aa11.68□□□□□ -0.54
UBE2N-203ENST00000549490 DDX60Q8IY21 1712 aaKnown RBP11.67□□□□□ -0.54
UBE2N-203ENST00000549490 H0YGN5 161 aa11.67□□□□□ -0.54
UBE2N-203ENST00000549490 DLL1O00548 723 aa11.67□□□□□ -0.54
UBE2N-203ENST00000549490 SASH1O94885 1247 aa11.67□□□□□ -0.54
UBE2N-203ENST00000549490 CAP1Q01518 475 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 309.8 ms