RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 TRIM11Q96F44 468 aa10.83□□□□□ -0.68
CHPT1-203ENST00000546873 PRDM6Q9NQX0 595 aa10.83□□□□□ -0.68
CHPT1-203ENST00000546873 CD109Q6YHK3 1445 aa10.83□□□□□ -0.68
CHPT1-203ENST00000546873 VPS8Q8N3P4 1428 aa10.83□□□□□ -0.68
CHPT1-203ENST00000546873 WDR7Q9Y4E6 1490 aa10.82□□□□□ -0.68
CHPT1-203ENST00000546873 ALBP02768 609 aa10.82□□□□□ -0.68
CHPT1-203ENST00000546873 SRPK2P78362 688 aaKnown RBP10.82□□□□□ -0.68
CHPT1-203ENST00000546873 DNAJB12Q9NXW2 375 aaKnown RBP10.82□□□□□ -0.68
CHPT1-203ENST00000546873 SLC6A14Q9UN76 642 aa10.82□□□□□ -0.68
CHPT1-203ENST00000546873 STARD13Q9Y3M8 1113 aa10.82□□□□□ -0.68
CHPT1-203ENST00000546873 MADDQ8WXG6 1647 aa10.82□□□□□ -0.68
CHPT1-203ENST00000546873 EFCAB5A4FU69 1503 aa10.82□□□□□ -0.68
CHPT1-203ENST00000546873 MAGI3Q5TCQ9 1506 aa10.82□□□□□ -0.68
CHPT1-203ENST00000546873 ARID3CA6NKF2 412 aa10.8□□□□□ -0.68
CHPT1-203ENST00000546873 PTCD1O75127 700 aaKnown RBP10.8□□□□□ -0.68
CHPT1-203ENST00000546873 TRIM28Q13263 835 aaKnown RBP10.8□□□□□ -0.68
CHPT1-203ENST00000546873 OCLNQ16625 522 aa10.8□□□□□ -0.68
CHPT1-203ENST00000546873 TMEM164Q5U3C3 297 aa10.8□□□□□ -0.68
CHPT1-203ENST00000546873 C16orf46Q6P387 395 aa10.8□□□□□ -0.68
CHPT1-203ENST00000546873 KRT25Q7Z3Z0 450 aa10.8□□□□□ -0.68
CHPT1-203ENST00000546873 TREML1Q86YW5 311 aa10.8□□□□□ -0.68
CHPT1-203ENST00000546873 COL26A1Q96A83 441 aa10.8□□□□□ -0.68
CHPT1-203ENST00000546873 DISP1Q96F81 1524 aa10.79□□□□□ -0.68
CHPT1-203ENST00000546873 C1QTNF9BB2RNN3 333 aa10.79□□□□□ -0.68
CHPT1-203ENST00000546873 MAP3K6O95382 1288 aa10.79□□□□□ -0.68
CHPT1-203ENST00000546873 APBA3O96018 575 aa10.79□□□□□ -0.68
CHPT1-203ENST00000546873 PROCP04070 461 aa10.79□□□□□ -0.68
CHPT1-203ENST00000546873 ITGB2P05107 769 aa10.79□□□□□ -0.68
CHPT1-203ENST00000546873 BRD2P25440 801 aaKnown RBP10.79□□□□□ -0.68
CHPT1-203ENST00000546873 SUZ12Q15022 739 aaKnown RBP10.79□□□□□ -0.68
CHPT1-203ENST00000546873 COX20Q5RI15 118 aa10.79□□□□□ -0.68
CHPT1-203ENST00000546873 JPH1Q9HDC5 661 aaPredicted RBP10.79□□□□□ -0.68
CHPT1-203ENST00000546873 CXXC1Q9P0U4 656 aaPredicted RBP10.79□□□□□ -0.68
CHPT1-203ENST00000546873 LRFN2Q9ULH4 789 aa10.79□□□□□ -0.68
CHPT1-203ENST00000546873 RTCBQ9Y3I0 505 aaKnown RBP10.79□□□□□ -0.68
CHPT1-203ENST00000546873 RARAP10276 462 aa10.78□□□□□ -0.68
CHPT1-203ENST00000546873 RGL4Q8IZJ4 473 aa10.78□□□□□ -0.68
CHPT1-203ENST00000546873 CMTR1Q8N1G2 835 aaKnown RBP10.78□□□□□ -0.68
CHPT1-203ENST00000546873 MKNK1Q9BUB5 465 aa10.78□□□□□ -0.68
CHPT1-203ENST00000546873 RGS9O75916 674 aaPredicted RBP10.77□□□□□ -0.69
CHPT1-203ENST00000546873 TRAPPC3LQ5T215 181 aa10.77□□□□□ -0.69
CHPT1-203ENST00000546873 C20orf204Q6ZNR8 217 aa10.77□□□□□ -0.69
CHPT1-203ENST00000546873 CD163Q86VB7 1156 aa10.77□□□□□ -0.69
CHPT1-203ENST00000546873 CLP1Q92989 425 aaKnown RBP10.77□□□□□ -0.69
CHPT1-203ENST00000546873 FAM13BQ9NYF5 915 aa10.77□□□□□ -0.69
CHPT1-203ENST00000546873 BCORL1Q5H9F3 1711 aa10.77□□□□□ -0.69
CHPT1-203ENST00000546873 SASH3O75995 380 aa10.76□□□□□ -0.69
CHPT1-203ENST00000546873 PSAPL1Q6NUJ1 521 aa10.76□□□□□ -0.69
CHPT1-203ENST00000546873 C8orf86Q6ZUL3 223 aa10.76□□□□□ -0.69
CHPT1-203ENST00000546873 FAM35AQ86V20 835 aa10.76□□□□□ -0.69
CHPT1-203ENST00000546873 NUDT8Q8WV74 236 aa10.76□□□□□ -0.69
CHPT1-203ENST00000546873 NACC1Q96RE7 527 aa10.76□□□□□ -0.69
CHPT1-203ENST00000546873 IQGAP2Q13576 1575 aa10.76□□□□□ -0.69
CHPT1-203ENST00000546873 ARID4BQ4LE39 1312 aaPredicted RBP10.76□□□□□ -0.69
CHPT1-203ENST00000546873 CFAP43Q8NDM7 1665 aa10.76□□□□□ -0.69
CHPT1-203ENST00000546873 ARAP3Q8WWN8 1544 aa10.75□□□□□ -0.69
CHPT1-203ENST00000546873 OPLAHO14841 1288 aa10.75□□□□□ -0.69
CHPT1-203ENST00000546873 XYLBO75191 536 aa10.75□□□□□ -0.69
CHPT1-203ENST00000546873 TARSP26639 723 aaKnown RBP10.75□□□□□ -0.69
CHPT1-203ENST00000546873 BAG6P46379 1132 aa10.75□□□□□ -0.69
CHPT1-203ENST00000546873 TRIM26Q12899 539 aaPredicted RBP10.75□□□□□ -0.69
CHPT1-203ENST00000546873 DHX32Q7L7V1 743 aaKnown RBP10.75□□□□□ -0.69
CHPT1-203ENST00000546873 C14orf37Q86TY3 774 aa10.75□□□□□ -0.69
CHPT1-203ENST00000546873 RIMS1Q86UR5 1692 aaKnown RBP10.75□□□□□ -0.69
CHPT1-203ENST00000546873 ARHGAP35Q9NRY4 1499 aa10.74□□□□□ -0.69
CHPT1-203ENST00000546873 RAPGEF3O95398 923 aa10.74□□□□□ -0.69
CHPT1-203ENST00000546873 NID1P14543 1247 aa10.74□□□□□ -0.69
CHPT1-203ENST00000546873 GRNP28799 593 aaKnown RBP10.74□□□□□ -0.69
CHPT1-203ENST00000546873 RANGAP1P46060 587 aaPredicted RBP10.74□□□□□ -0.69
CHPT1-203ENST00000546873 RAC1P63000 192 aa10.74□□□□□ -0.69
CHPT1-203ENST00000546873 NAA30Q147X3 362 aaPredicted RBP10.74□□□□□ -0.69
CHPT1-203ENST00000546873 CPB1P15086 417 aa10.73□□□□□ -0.69
CHPT1-203ENST00000546873 CHRNA4P43681 627 aa10.73□□□□□ -0.69
CHPT1-203ENST00000546873 SAP130Q9H0E3 1048 aa10.73□□□□□ -0.69
CHPT1-203ENST00000546873 USP20Q9Y2K6 914 aa10.73□□□□□ -0.69
CHPT1-203ENST00000546873 EGFRP00533 1210 aa10.72□□□□□ -0.69
CHPT1-203ENST00000546873 PSAPP07602 524 aa10.72□□□□□ -0.69
CHPT1-203ENST00000546873 ATP2B4P23634 1241 aa10.72□□□□□ -0.69
CHPT1-203ENST00000546873 COL9A3Q14050 684 aaPredicted RBP10.72□□□□□ -0.69
CHPT1-203ENST00000546873 ELMSAN1Q6PJG2 1045 aa10.72□□□□□ -0.69
CHPT1-203ENST00000546873 CCDC82Q8N4S0 544 aa10.72□□□□□ -0.69
CHPT1-203ENST00000546873 PIK3R5Q8WYR1 880 aa10.72□□□□□ -0.69
CHPT1-203ENST00000546873 ZFATQ9P243 1243 aa10.72□□□□□ -0.69
CHPT1-203ENST00000546873 PPP1R15AO75807 674 aaPredicted RBP10.71□□□□□ -0.69
CHPT1-203ENST00000546873 GATA4P43694 442 aa10.71□□□□□ -0.69
CHPT1-203ENST00000546873 GPLD1P80108 840 aa10.71□□□□□ -0.69
CHPT1-203ENST00000546873 SAMD9Q5K651 1589 aa10.71□□□□□ -0.69
CHPT1-203ENST00000546873 ETFBKMTQ8IXQ9 262 aa10.71□□□□□ -0.69
CHPT1-203ENST00000546873 TRPM4Q8TD43 1214 aa10.71□□□□□ -0.69
CHPT1-203ENST00000546873 PCGF6Q9BYE7 350 aa10.71□□□□□ -0.69
CHPT1-203ENST00000546873 FRRS1LQ9P0K9 344 aa10.71□□□□□ -0.69
CHPT1-203ENST00000546873 FAM229AH3BQW9 127 aa10.7□□□□□ -0.7
CHPT1-203ENST00000546873 NRLP54845 237 aa10.7□□□□□ -0.7
CHPT1-203ENST00000546873 ABTB2Q8N961 1025 aa10.7□□□□□ -0.7
CHPT1-203ENST00000546873 TLR7Q9NYK1 1049 aaKnown RBP10.7□□□□□ -0.7
CHPT1-203ENST00000546873 STIM2Q9P246 746 aa10.7□□□□□ -0.7
CHPT1-203ENST00000546873 NAGPAQ9UK23 515 aa10.7□□□□□ -0.7
CHPT1-203ENST00000546873 FNDC3AQ9Y2H6 1198 aaKnown RBP10.7□□□□□ -0.7
CHPT1-203ENST00000546873 K7ELQ4 463 aaPredicted RBP10.69□□□□□ -0.7
CHPT1-203ENST00000546873 AFF1P51825 1210 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms