RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 H3BM21 787 aa13.04□□□□□ -0.32
MRPS35-204ENST00000542199 RPLP1P05386 114 aaKnown RBP13.04□□□□□ -0.32
MRPS35-204ENST00000542199 CTBSQ01459 385 aa13.04□□□□□ -0.32
MRPS35-204ENST00000542199 EHHADHQ08426 723 aa13.04□□□□□ -0.32
MRPS35-204ENST00000542199 ORC1Q13415 861 aa13.04□□□□□ -0.32
MRPS35-204ENST00000542199 GPR161Q8N6U8 529 aaKnown RBP13.04□□□□□ -0.32
MRPS35-204ENST00000542199 ALKBH8Q96BT7 664 aaKnown RBP13.04□□□□□ -0.32
MRPS35-204ENST00000542199 TRERF1Q96PN7 1200 aa13.04□□□□□ -0.32
MRPS35-204ENST00000542199 GSX2Q9BZM3 304 aa13.04□□□□□ -0.32
MRPS35-204ENST00000542199 FOXD3Q9UJU5 478 aaPredicted RBP13.04□□□□□ -0.32
MRPS35-204ENST00000542199 FNDC3AQ9Y2H6 1198 aaKnown RBP13.04□□□□□ -0.32
MRPS35-204ENST00000542199 SASH3O75995 380 aa13.03□□□□□ -0.32
MRPS35-204ENST00000542199 EGFRP00533 1210 aa13.03□□□□□ -0.32
MRPS35-204ENST00000542199 TAGLNQ01995 201 aaKnown RBP13.03□□□□□ -0.32
MRPS35-204ENST00000542199 SPEM2Q0P670 501 aa13.03□□□□□ -0.32
MRPS35-204ENST00000542199 GAS6Q14393 721 aa13.03□□□□□ -0.32
MRPS35-204ENST00000542199 FOXR1Q6PIV2 292 aa13.03□□□□□ -0.32
MRPS35-204ENST00000542199 CFHR5Q9BXR6 569 aa13.03□□□□□ -0.32
MRPS35-204ENST00000542199 ELP3Q9H9T3 547 aa13.03□□□□□ -0.32
MRPS35-204ENST00000542199 FHOD3Q2V2M9 1422 aa13.03□□□□□ -0.32
MRPS35-204ENST00000542199 CCINQ13939 588 aa13.02□□□□□ -0.33
MRPS35-204ENST00000542199 PHF24Q9UPV7 400 aa13.02□□□□□ -0.33
MRPS35-204ENST00000542199 NUP153P49790 1475 aaKnown RBP13.02□□□□□ -0.33
MRPS35-204ENST00000542199 CFAP43Q8NDM7 1665 aa13.02□□□□□ -0.33
MRPS35-204ENST00000542199 TARSP26639 723 aaKnown RBP13.01□□□□□ -0.33
MRPS35-204ENST00000542199 MAPK8P45983 427 aa13.01□□□□□ -0.33
MRPS35-204ENST00000542199 PLCB3Q01970 1234 aa13.01□□□□□ -0.33
MRPS35-204ENST00000542199 PDE12Q6L8Q7 609 aaKnown RBP13.01□□□□□ -0.33
MRPS35-204ENST00000542199 FBXO33Q7Z6M2 555 aa13.01□□□□□ -0.33
MRPS35-204ENST00000542199 SETDB2Q96T68 719 aa13.01□□□□□ -0.33
MRPS35-204ENST00000542199 BCL2L13Q9BXK5 485 aa13.01□□□□□ -0.33
MRPS35-204ENST00000542199 ZFATQ9P243 1243 aa13.01□□□□□ -0.33
MRPS35-204ENST00000542199 RAPGEF6Q8TEU7 1601 aa13□□□□□ -0.33
MRPS35-204ENST00000542199 ERBB4Q15303 1308 aa13□□□□□ -0.33
MRPS35-204ENST00000542199 TNFRSF21O75509 655 aa13□□□□□ -0.33
MRPS35-204ENST00000542199 RANGAP1P46060 587 aaPredicted RBP13□□□□□ -0.33
MRPS35-204ENST00000542199 XKR5Q6UX68 686 aa13□□□□□ -0.33
MRPS35-204ENST00000542199 GIPC2Q8TF65 315 aa13□□□□□ -0.33
MRPS35-204ENST00000542199 EFCAB5A4FU69 1503 aa12.99□□□□□ -0.33
MRPS35-204ENST00000542199 C2CD2LO14523 706 aa12.99□□□□□ -0.33
MRPS35-204ENST00000542199 NFKB1P19838 968 aa12.99□□□□□ -0.33
MRPS35-204ENST00000542199 NLRP13Q86W25 1043 aa12.99□□□□□ -0.33
MRPS35-204ENST00000542199 BHMTQ93088 406 aa12.99□□□□□ -0.33
MRPS35-204ENST00000542199 TERTO14746 1132 aaKnown RBP12.98□□□□□ -0.33
MRPS35-204ENST00000542199 EAPPQ56P03 285 aaPredicted RBP12.98□□□□□ -0.33
MRPS35-204ENST00000542199 FAM182BQ5T319 152 aa12.98□□□□□ -0.33
MRPS35-204ENST00000542199 NPAS3Q8IXF0 933 aa12.98□□□□□ -0.33
MRPS35-204ENST00000542199 C11orf16Q9NQ32 467 aa12.98□□□□□ -0.33
MRPS35-204ENST00000542199 CNTN3Q9P232 1028 aa12.98□□□□□ -0.33
MRPS35-204ENST00000542199 PNMA6FA0A0J9YX94 578 aa12.97□□□□□ -0.33
MRPS35-204ENST00000542199 USPL1Q5W0Q7 1092 aa12.97□□□□□ -0.33
MRPS35-204ENST00000542199 SNX29Q8TEQ0 813 aa12.97□□□□□ -0.33
MRPS35-204ENST00000542199 PNMA5Q96PV4 448 aa12.97□□□□□ -0.33
MRPS35-204ENST00000542199 CHRDQ9H2X0 955 aa12.97□□□□□ -0.33
MRPS35-204ENST00000542199 WWC3Q9ULE0 1092 aa12.97□□□□□ -0.33
MRPS35-204ENST00000542199 ABCA9Q8IUA7 1624 aa12.96□□□□□ -0.33
MRPS35-204ENST00000542199 EIF1AYO14602 144 aaKnown RBP12.96□□□□□ -0.33
MRPS35-204ENST00000542199 MMP20O60882 483 aa12.96□□□□□ -0.33
MRPS35-204ENST00000542199 RARAP10276 462 aa12.96□□□□□ -0.33
MRPS35-204ENST00000542199 COL19A1Q14993 1142 aa12.96□□□□□ -0.33
MRPS35-204ENST00000542199 RNFT1Q5M7Z0 435 aa12.96□□□□□ -0.33
MRPS35-204ENST00000542199 C1orf127Q8N9H9 656 aa12.96□□□□□ -0.33
MRPS35-204ENST00000542199 ABI2Q9NYB9 513 aaPredicted RBP12.96□□□□□ -0.33
MRPS35-204ENST00000542199 AMOTL2Q9Y2J4 779 aa12.96□□□□□ -0.33
MRPS35-204ENST00000542199 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.96□□□□□ -0.33
MRPS35-204ENST00000542199 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.96□□□□□ -0.33
MRPS35-204ENST00000542199 ARAP3Q8WWN8 1544 aa12.96□□□□□ -0.33
MRPS35-204ENST00000542199 PHLDB1Q86UU1 1377 aa12.95□□□□□ -0.34
MRPS35-204ENST00000542199 CYP2E1P05181 493 aaPredicted RBP12.95□□□□□ -0.34
MRPS35-204ENST00000542199 VSIG8P0DPA2 414 aa12.95□□□□□ -0.34
MRPS35-204ENST00000542199 ENOX2Q16206 610 aaKnown RBP12.95□□□□□ -0.34
MRPS35-204ENST00000542199 CSRNP1Q96S65 589 aa12.95□□□□□ -0.34
MRPS35-204ENST00000542199 ADGRL1O94910 1474 aa12.95□□□□□ -0.34
MRPS35-204ENST00000542199 PHACTR2O75167 634 aa12.94□□□□□ -0.34
MRPS35-204ENST00000542199 BMP4P12644 408 aa12.94□□□□□ -0.34
MRPS35-204ENST00000542199 MX2P20592 715 aa12.94□□□□□ -0.34
MRPS35-204ENST00000542199 RBM47A0AV96 593 aaKnown RBP12.93□□□□□ -0.34
MRPS35-204ENST00000542199 LDHBP07195 334 aaKnown RBP12.93□□□□□ -0.34
MRPS35-204ENST00000542199 ZNF16P17020 682 aaPredicted RBP12.93□□□□□ -0.34
MRPS35-204ENST00000542199 RNF19AQ9NV58 838 aa12.93□□□□□ -0.34
MRPS35-204ENST00000542199 EREGO14944 169 aa12.92□□□□□ -0.34
MRPS35-204ENST00000542199 POLR3DP05423 398 aaPredicted RBP12.92□□□□□ -0.34
MRPS35-204ENST00000542199 RBM25P49756 843 aaKnown RBP12.92□□□□□ -0.34
MRPS35-204ENST00000542199 TTC39BQ5VTQ0 682 aaPredicted RBP12.92□□□□□ -0.34
MRPS35-204ENST00000542199 COL25A1Q9BXS0 654 aaPredicted RBP12.92□□□□□ -0.34
MRPS35-204ENST00000542199 ZFYVE28Q9HCC9 887 aa12.92□□□□□ -0.34
MRPS35-204ENST00000542199 KANSL3Q9P2N6 904 aa12.92□□□□□ -0.34
MRPS35-204ENST00000542199 PRR12Q9ULL5 1215 aa12.92□□□□□ -0.34
MRPS35-204ENST00000542199 NEO1Q92859 1461 aa12.91□□□□□ -0.34
MRPS35-204ENST00000542199 PLEKHD1A6NEE1 506 aa12.91□□□□□ -0.34
MRPS35-204ENST00000542199 CPNE3O75131 537 aaKnown RBP12.91□□□□□ -0.34
MRPS35-204ENST00000542199 PCBP4P57723 403 aaKnown RBP12.91□□□□□ -0.34
MRPS35-204ENST00000542199 NFX1Q12986 1120 aaKnown RBP12.91□□□□□ -0.34
MRPS35-204ENST00000542199 LCE2CQ5TA81 110 aa12.91□□□□□ -0.34
MRPS35-204ENST00000542199 SYT9Q86SS6 491 aa12.91□□□□□ -0.34
MRPS35-204ENST00000542199 ARHGAP35Q9NRY4 1499 aa12.91□□□□□ -0.34
MRPS35-204ENST00000542199 UNCXA6NJT0 531 aa12.9□□□□□ -0.34
MRPS35-204ENST00000542199 KRT76Q01546 638 aa12.9□□□□□ -0.34
MRPS35-204ENST00000542199 ZNF468Q5VIY5 522 aaPredicted RBP12.9□□□□□ -0.34
MRPS35-204ENST00000542199 OR13H1Q8NG92 308 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms