RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 DIAPH3Q9NSV4 1193 aa20.62■□□□□ 0.89
PCDHB17P-201ENST00000539533 ISY1Q9ULR0 285 aaKnown RBP20.62■□□□□ 0.89
PCDHB17P-201ENST00000539533 RGL2O15211 777 aa20.61■□□□□ 0.89
PCDHB17P-201ENST00000539533 METTL24Q5JXM2 366 aa20.61■□□□□ 0.89
PCDHB17P-201ENST00000539533 GRPEL1Q9HAV7 217 aa20.61■□□□□ 0.89
PCDHB17P-201ENST00000539533 RIC1Q4ADV7 1423 aa20.61■□□□□ 0.89
PCDHB17P-201ENST00000539533 RFC4P35249 363 aa20.61■□□□□ 0.89
PCDHB17P-201ENST00000539533 CLCN1P35523 988 aa20.61■□□□□ 0.89
PCDHB17P-201ENST00000539533 DNAJC2Q99543 621 aaKnown RBP20.61■□□□□ 0.89
PCDHB17P-201ENST00000539533 SETDB2Q96T68 719 aa20.6■□□□□ 0.89
PCDHB17P-201ENST00000539533 FSD1Q9BTV5 496 aa20.6■□□□□ 0.89
PCDHB17P-201ENST00000539533 AKAP2Q9Y2D5 859 aa20.6■□□□□ 0.89
PCDHB17P-201ENST00000539533 RXRBP28702 533 aa20.6■□□□□ 0.89
PCDHB17P-201ENST00000539533 ADORA1P30542 326 aa20.6■□□□□ 0.89
PCDHB17P-201ENST00000539533 RAB3GAP1Q15042 981 aa20.6■□□□□ 0.89
PCDHB17P-201ENST00000539533 CCDC152Q4G0S7 254 aa20.6■□□□□ 0.89
PCDHB17P-201ENST00000539533 GBP4Q96PP9 640 aa20.6■□□□□ 0.89
PCDHB17P-201ENST00000539533 HSP90B1P14625 803 aaKnown RBP20.59■□□□□ 0.89
PCDHB17P-201ENST00000539533 SLC27A3Q5K4L6 730 aa20.59■□□□□ 0.89
PCDHB17P-201ENST00000539533 C3orf67Q6ZVT6 689 aa20.59■□□□□ 0.89
PCDHB17P-201ENST00000539533 PROM2Q8N271 834 aa20.59■□□□□ 0.89
PCDHB17P-201ENST00000539533 XAGE2Q96GT9 111 aa20.59■□□□□ 0.89
PCDHB17P-201ENST00000539533 HAUS7Q99871 368 aa20.59■□□□□ 0.89
PCDHB17P-201ENST00000539533 VGLL2Q8N8G2 317 aa20.59■□□□□ 0.89
PCDHB17P-201ENST00000539533 GTF2E1P29083 439 aaPredicted RBP20.58■□□□□ 0.89
PCDHB17P-201ENST00000539533 FAM227BQ96M60 508 aa20.58■□□□□ 0.89
PCDHB17P-201ENST00000539533 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.58■□□□□ 0.88
PCDHB17P-201ENST00000539533 CD2BP2O95400 341 aaKnown RBP20.58■□□□□ 0.88
PCDHB17P-201ENST00000539533 C4AP0C0L4 1744 aa20.57■□□□□ 0.88
PCDHB17P-201ENST00000539533 HSP90AA1P07900 732 aaKnown RBP20.57■□□□□ 0.88
PCDHB17P-201ENST00000539533 HELBQ8NG08 1087 aaPredicted RBP20.57■□□□□ 0.88
PCDHB17P-201ENST00000539533 RGS17Q9UGC6 210 aaPredicted RBP20.57■□□□□ 0.88
PCDHB17P-201ENST00000539533 LAMB2P55268 1798 aa20.57■□□□□ 0.88
PCDHB17P-201ENST00000539533 NMIQ13287 307 aaPredicted RBP20.57■□□□□ 0.88
PCDHB17P-201ENST00000539533 ATP2B3Q16720 1220 aa20.57■□□□□ 0.88
PCDHB17P-201ENST00000539533 TXNRD1Q16881 649 aa20.57■□□□□ 0.88
PCDHB17P-201ENST00000539533 DDX46Q7L014 1031 aaKnown RBP20.57■□□□□ 0.88
PCDHB17P-201ENST00000539533 NBPF5PQ86XG9 351 aaPredicted RBP20.57■□□□□ 0.88
PCDHB17P-201ENST00000539533 CCDC24Q8N4L8 307 aa20.57■□□□□ 0.88
PCDHB17P-201ENST00000539533 RUFY2Q8WXA3 655 aa20.57■□□□□ 0.88
PCDHB17P-201ENST00000539533 PDE8BO95263 885 aa20.56■□□□□ 0.88
PCDHB17P-201ENST00000539533 HSP90AA2PQ14568 343 aaPredicted RBP20.56■□□□□ 0.88
PCDHB17P-201ENST00000539533 GORABQ5T7V8 394 aa20.56■□□□□ 0.88
PCDHB17P-201ENST00000539533 MPHOSPH8Q99549 860 aa20.56■□□□□ 0.88
PCDHB17P-201ENST00000539533 LSG1Q9H089 658 aaKnown RBP20.56■□□□□ 0.88
PCDHB17P-201ENST00000539533 PALD1Q9ULE6 856 aa20.56■□□□□ 0.88
PCDHB17P-201ENST00000539533 ABCC12Q96J65 1359 aa20.56■□□□□ 0.88
PCDHB17P-201ENST00000539533 IFIT1P09914 478 aaKnown RBP20.56■□□□□ 0.88
PCDHB17P-201ENST00000539533 K7ELQ4 463 aaPredicted RBP20.55■□□□□ 0.88
PCDHB17P-201ENST00000539533 CHGBP05060 677 aa20.55■□□□□ 0.88
PCDHB17P-201ENST00000539533 SLC10A5Q5PT55 438 aa20.55■□□□□ 0.88
PCDHB17P-201ENST00000539533 NYXQ9GZU5 481 aa20.55■□□□□ 0.88
PCDHB17P-201ENST00000539533 RTL9Q8NET4 1388 aa20.55■□□□□ 0.88
PCDHB17P-201ENST00000539533 A0A0D9SFI3 127 aa20.54■□□□□ 0.88
PCDHB17P-201ENST00000539533 HIP1O00291 1037 aa20.54■□□□□ 0.88
PCDHB17P-201ENST00000539533 GOLIM4O00461 696 aa20.54■□□□□ 0.88
PCDHB17P-201ENST00000539533 RABEP1Q15276 862 aa20.54■□□□□ 0.88
PCDHB17P-201ENST00000539533 SKOR2Q2VWA4 1001 aaPredicted RBP20.54■□□□□ 0.88
PCDHB17P-201ENST00000539533 CCDC158Q5M9N0 1113 aa20.54■□□□□ 0.88
PCDHB17P-201ENST00000539533 LRP5O75197 1615 aa20.54■□□□□ 0.88
PCDHB17P-201ENST00000539533 ADRA2BP18089 450 aa20.54■□□□□ 0.88
PCDHB17P-201ENST00000539533 PTMSP20962 102 aa20.54■□□□□ 0.88
PCDHB17P-201ENST00000539533 SF3B3Q15393 1217 aaKnown RBP20.54■□□□□ 0.88
PCDHB17P-201ENST00000539533 PAG1Q9NWQ8 432 aa20.54■□□□□ 0.88
PCDHB17P-201ENST00000539533 COL4A1P02462 1669 aa20.54■□□□□ 0.88
PCDHB17P-201ENST00000539533 UBR3Q6ZT12 1888 aa20.54■□□□□ 0.88
PCDHB17P-201ENST00000539533 TTC39AQ5SRH9 613 aa20.53■□□□□ 0.88
PCDHB17P-201ENST00000539533 TPTE2Q6XPS3 522 aa20.53■□□□□ 0.88
PCDHB17P-201ENST00000539533 KIAA1211Q6ZU35 1233 aa20.53■□□□□ 0.88
PCDHB17P-201ENST00000539533 MROH5Q6ZUA9 1318 aa20.53■□□□□ 0.88
PCDHB17P-201ENST00000539533 RAD50Q92878 1312 aa20.53■□□□□ 0.88
PCDHB17P-201ENST00000539533 SNAP23O00161 211 aa20.53■□□□□ 0.88
PCDHB17P-201ENST00000539533 TAF5LO75529 589 aa20.53■□□□□ 0.88
PCDHB17P-201ENST00000539533 APBA3O96018 575 aa20.53■□□□□ 0.88
PCDHB17P-201ENST00000539533 MCCP23508 829 aa20.53■□□□□ 0.88
PCDHB17P-201ENST00000539533 IGHMBP2P38935 993 aaKnown RBP20.53■□□□□ 0.88
PCDHB17P-201ENST00000539533 PTH1RQ03431 593 aa20.53■□□□□ 0.88
PCDHB17P-201ENST00000539533 POTEAQ6S8J7 498 aa20.53■□□□□ 0.88
PCDHB17P-201ENST00000539533 FOXD4L1Q9NU39 408 aa20.53■□□□□ 0.88
PCDHB17P-201ENST00000539533 NFIXQ14938 502 aa20.52■□□□□ 0.88
PCDHB17P-201ENST00000539533 SNRKQ9NRH2 765 aa20.52■□□□□ 0.88
PCDHB17P-201ENST00000539533 COL24A1Q17RW2 1714 aa20.52■□□□□ 0.88
PCDHB17P-201ENST00000539533 EPB41L2O43491 1005 aaKnown RBP20.52■□□□□ 0.88
PCDHB17P-201ENST00000539533 RRP9O43818 475 aaKnown RBP20.52■□□□□ 0.88
PCDHB17P-201ENST00000539533 HSPA4P34932 840 aa20.52■□□□□ 0.88
PCDHB17P-201ENST00000539533 SCARF1Q14162 830 aa20.52■□□□□ 0.88
PCDHB17P-201ENST00000539533 GAS2L3Q86XJ1 694 aa20.52■□□□□ 0.88
PCDHB17P-201ENST00000539533 KBTBD3Q8NAB2 608 aa20.52■□□□□ 0.88
PCDHB17P-201ENST00000539533 FKBP4Q02790 459 aaKnown RBP eCLIP20.51■□□□□ 0.87
PCDHB17P-201ENST00000539533 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.51■□□□□ 0.87
PCDHB17P-201ENST00000539533 SPEF2Q9C093 1822 aa20.51■□□□□ 0.87
PCDHB17P-201ENST00000539533 TAF1P21675 1872 aa20.51■□□□□ 0.87
PCDHB17P-201ENST00000539533 ZMYND15Q9H091 742 aa20.51■□□□□ 0.87
PCDHB17P-201ENST00000539533 PLSCR1O15162 318 aa20.5■□□□□ 0.87
PCDHB17P-201ENST00000539533 FGFR2P21802 821 aa20.5■□□□□ 0.87
PCDHB17P-201ENST00000539533 SSFA2P28290 1259 aa20.5■□□□□ 0.87
PCDHB17P-201ENST00000539533 PUM3Q15397 648 aaKnown RBP20.5■□□□□ 0.87
PCDHB17P-201ENST00000539533 NLRP3Q96P20 1036 aa20.5■□□□□ 0.87
PCDHB17P-201ENST00000539533 CDC5LQ99459 802 aaKnown RBP20.5■□□□□ 0.87
PCDHB17P-201ENST00000539533 CASZ1Q86V15 1759 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms