RNA–Protein interactions for RNA: ENST00000534070.5

CHEK1-216, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-216ENST00000534070 NBPF11Q86T75 865 aa7.58□□□□□ -1.2
CHEK1-216ENST00000534070 TET3O43151 1660 aa7.58□□□□□ -1.2
CHEK1-216ENST00000534070 CD46P15529 392 aa7.58□□□□□ -1.2
CHEK1-216ENST00000534070 ADD2P35612 726 aa7.58□□□□□ -1.2
CHEK1-216ENST00000534070 CCSAPQ6IQ19 270 aaPredicted RBP7.58□□□□□ -1.2
CHEK1-216ENST00000534070 CCDC174Q6PII3 467 aa7.58□□□□□ -1.2
CHEK1-216ENST00000534070 TPCN2Q8NHX9 752 aa7.58□□□□□ -1.2
CHEK1-216ENST00000534070 FRMD6Q96NE9 622 aa7.58□□□□□ -1.2
CHEK1-216ENST00000534070 IPO9Q96P70 1041 aaKnown RBP7.58□□□□□ -1.2
CHEK1-216ENST00000534070 PRPF40AO75400 957 aaKnown RBP7.57□□□□□ -1.2
CHEK1-216ENST00000534070 IGHDP01880 384 aa7.57□□□□□ -1.2
CHEK1-216ENST00000534070 MYL1P05976 194 aa7.57□□□□□ -1.2
CHEK1-216ENST00000534070 EPB42P16452 691 aa7.57□□□□□ -1.2
CHEK1-216ENST00000534070 SQSTM1Q13501 440 aa7.57□□□□□ -1.2
CHEK1-216ENST00000534070 ESCO1Q5FWF5 840 aa7.57□□□□□ -1.2
CHEK1-216ENST00000534070 TAS1R3Q7RTX0 852 aa7.57□□□□□ -1.2
CHEK1-216ENST00000534070 EIF2AK1Q9BQI3 630 aaKnown RBP7.57□□□□□ -1.2
CHEK1-216ENST00000534070 TRIM55Q9BYV6 548 aa7.57□□□□□ -1.2
CHEK1-216ENST00000534070 MBD5Q9P267 1494 aa7.57□□□□□ -1.2
CHEK1-216ENST00000534070 NRXN3Q9Y4C0 1643 aa7.57□□□□□ -1.2
CHEK1-216ENST00000534070 EVI5O60447 810 aa7.57□□□□□ -1.2
CHEK1-216ENST00000534070 ZRANB2O95218 330 aaKnown RBP eCLIP7.57□□□□□ -1.2
CHEK1-216ENST00000534070 EIF4G2P78344 907 aaKnown RBP eCLIP7.57□□□□□ -1.2
CHEK1-216ENST00000534070 EXOSC10Q01780 885 aaKnown RBP7.57□□□□□ -1.2
CHEK1-216ENST00000534070 NBPF1Q3BBV0 1214 aa7.57□□□□□ -1.2
CHEK1-216ENST00000534070 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.57□□□□□ -1.2
CHEK1-216ENST00000534070 MYO1HQ8N1T3 1032 aa7.57□□□□□ -1.2
CHEK1-216ENST00000534070 SVIPQ8NHG7 77 aa7.57□□□□□ -1.2
CHEK1-216ENST00000534070 TMX1Q9H3N1 280 aa7.57□□□□□ -1.2
CHEK1-216ENST00000534070 CD2APQ9Y5K6 639 aa7.57□□□□□ -1.2
CHEK1-216ENST00000534070 SSBP05455 408 aaKnown RBP eCLIP7.57□□□□□ -1.2
CHEK1-216ENST00000534070 GEMIN4P57678 1058 aaKnown RBP7.57□□□□□ -1.2
CHEK1-216ENST00000534070 FAM43AQ8N2R8 423 aa7.57□□□□□ -1.2
CHEK1-216ENST00000534070 NELL1Q92832 810 aa7.57□□□□□ -1.2
CHEK1-216ENST00000534070 DNAJC25Q9H1X3 360 aa7.57□□□□□ -1.2
CHEK1-216ENST00000534070 PCDHB9Q9Y5E1 797 aa7.57□□□□□ -1.2
CHEK1-216ENST00000534070 SYNMO15061 1565 aa7.57□□□□□ -1.2
CHEK1-216ENST00000534070 EN1Q05925 392 aaPredicted RBP7.56□□□□□ -1.2
CHEK1-216ENST00000534070 MCL1Q07820 350 aa7.56□□□□□ -1.2
CHEK1-216ENST00000534070 ZRSR2Q15696 482 aaKnown RBP7.56□□□□□ -1.2
CHEK1-216ENST00000534070 DDX42Q86XP3 938 aaKnown RBP eCLIP7.56□□□□□ -1.2
CHEK1-216ENST00000534070 TTC8Q8TAM2 541 aa7.56□□□□□ -1.2
CHEK1-216ENST00000534070 PPM1EQ8WY54 764 aa7.56□□□□□ -1.2
CHEK1-216ENST00000534070 ST7Q9NRC1 585 aa7.56□□□□□ -1.2
CHEK1-216ENST00000534070 EGFL7Q9UHF1 273 aa7.56□□□□□ -1.2
CHEK1-216ENST00000534070 CEP170BQ9Y4F5 1589 aaPredicted RBP7.56□□□□□ -1.2
CHEK1-216ENST00000534070 CAND2O75155 1236 aa7.56□□□□□ -1.2
CHEK1-216ENST00000534070 NYAP1Q6ZVC0 841 aa7.56□□□□□ -1.2
CHEK1-216ENST00000534070 CELF2-AS1Q8N7Q2 184 aa7.56□□□□□ -1.2
CHEK1-216ENST00000534070 JPH3Q8WXH2 748 aaPredicted RBP7.56□□□□□ -1.2
CHEK1-216ENST00000534070 V9GY48 417 aaPredicted RBP7.56□□□□□ -1.2
CHEK1-216ENST00000534070 IQSEC2Q5JU85 1478 aa7.56□□□□□ -1.2
CHEK1-216ENST00000534070 KIAA1107Q9UPP5 1409 aa7.56□□□□□ -1.2
CHEK1-216ENST00000534070 COL9A1P20849 921 aa7.56□□□□□ -1.2
CHEK1-216ENST00000534070 CCDC8Q9H0W5 538 aaPredicted RBP7.56□□□□□ -1.2
CHEK1-216ENST00000534070 ZBTB3Q9H5J0 574 aa7.56□□□□□ -1.2
CHEK1-216ENST00000534070 LUZP4Q9P127 313 aa7.56□□□□□ -1.2
CHEK1-216ENST00000534070 NR1I2O75469 434 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 RBP3P10745 1247 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 HDAC1Q13547 482 aaPredicted RBP7.55□□□□□ -1.2
CHEK1-216ENST00000534070 MRGBPQ9NV56 204 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 AGR2O95994 175 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 SOX11P35716 441 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 NEXNQ0ZGT2 675 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 SWI5Q1ZZU3 235 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 ALKBH2Q6NS38 261 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 SAMD3Q8N6K7 520 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 CCDC89Q8N998 374 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 PARD3BQ8TEW8 1205 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 RUNDC1Q96C34 613 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 MYCBPQ99417 103 aaPredicted RBP7.55□□□□□ -1.2
CHEK1-216ENST00000534070 PPP4R2Q9NY27 417 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 HDAC5Q9UQL6 1122 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 PRKAB1Q9Y478 270 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 STRCP1A6NGW2 1772 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 PRG4Q92954 1404 aaPredicted RBP7.55□□□□□ -1.2
CHEK1-216ENST00000534070 CARMIL1Q5VZK9 1371 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 GOLIM4O00461 696 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 PTGER2P43116 358 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 MAPRE1Q15691 268 aaKnown RBP7.55□□□□□ -1.2
CHEK1-216ENST00000534070 FAM83BQ5T0W9 1011 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 KIAA0907Q7Z7F0 614 aaPredicted RBP7.55□□□□□ -1.2
CHEK1-216ENST00000534070 ERP27Q96DN0 273 aa7.55□□□□□ -1.2
CHEK1-216ENST00000534070 A6NCN8 305 aa7.54□□□□□ -1.2
CHEK1-216ENST00000534070 SLC4A3P48751 1232 aa7.54□□□□□ -1.2
CHEK1-216ENST00000534070 HDGFL2Q7Z4V5 671 aaPredicted RBP7.54□□□□□ -1.2
CHEK1-216ENST00000534070 ZNF513Q8N8E2 541 aaPredicted RBP7.54□□□□□ -1.2
CHEK1-216ENST00000534070 ANKRD42Q8N9B4 389 aa7.54□□□□□ -1.2
CHEK1-216ENST00000534070 APPBP2Q92624 585 aa7.54□□□□□ -1.2
CHEK1-216ENST00000534070 TRPC6Q9Y210 931 aa7.54□□□□□ -1.2
CHEK1-216ENST00000534070 PPLO60437 1756 aa7.54□□□□□ -1.2
CHEK1-216ENST00000534070 KIF3BO15066 747 aa7.54□□□□□ -1.2
CHEK1-216ENST00000534070 HINFPQ9BQA5 517 aa7.54□□□□□ -1.2
CHEK1-216ENST00000534070 RRP7BPQ9NSQ0 103 aa7.54□□□□□ -1.2
CHEK1-216ENST00000534070 IP6K2Q9UHH9 426 aa7.54□□□□□ -1.2
CHEK1-216ENST00000534070 IRS4O14654 1257 aaPredicted RBP7.53□□□□□ -1.2
CHEK1-216ENST00000534070 APPP05067 770 aa7.53□□□□□ -1.2
CHEK1-216ENST00000534070 NOS2P35228 1153 aa7.53□□□□□ -1.2
CHEK1-216ENST00000534070 TTC30AQ86WT1 665 aa7.53□□□□□ -1.2
CHEK1-216ENST00000534070 ZNF654Q8IZM8 581 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms