RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 CCDC171Q6TFL3 1326 aa26.33■■□□□ 1.81
AP004608.1-202ENST00000533390 A0A0D9SFI3 127 aa26.33■■□□□ 1.81
AP004608.1-202ENST00000533390 TICAM2Q86XR7 235 aa26.33■■□□□ 1.81
AP004608.1-202ENST00000533390 RTL9Q8NET4 1388 aa26.33■■□□□ 1.8
AP004608.1-202ENST00000533390 MROH5Q6ZUA9 1318 aa26.32■■□□□ 1.8
AP004608.1-202ENST00000533390 MPHOSPH8Q99549 860 aa26.32■■□□□ 1.8
AP004608.1-202ENST00000533390 GOLIM4O00461 696 aa26.32■■□□□ 1.8
AP004608.1-202ENST00000533390 NFKBIBQ15653 356 aa26.32■■□□□ 1.8
AP004608.1-202ENST00000533390 BICDL1Q6ZP65 573 aa26.32■■□□□ 1.8
AP004608.1-202ENST00000533390 ABCC12Q96J65 1359 aa26.31■■□□□ 1.8
AP004608.1-202ENST00000533390 PDE8BO95263 885 aa26.31■■□□□ 1.8
AP004608.1-202ENST00000533390 ADORA1P30542 326 aa26.31■■□□□ 1.8
AP004608.1-202ENST00000533390 MCM2P49736 904 aa26.31■■□□□ 1.8
AP004608.1-202ENST00000533390 PTH1RQ03431 593 aa26.31■■□□□ 1.8
AP004608.1-202ENST00000533390 TBC1D9BQ66K14 1250 aa26.31■■□□□ 1.8
AP004608.1-202ENST00000533390 SMIM5Q71RC9 77 aa26.31■■□□□ 1.8
AP004608.1-202ENST00000533390 BCL2L12Q9HB09 334 aa26.31■■□□□ 1.8
AP004608.1-202ENST00000533390 GTF2E1P29083 439 aaPredicted RBP26.3■■□□□ 1.8
AP004608.1-202ENST00000533390 VGLL2Q8N8G2 317 aa26.3■■□□□ 1.8
AP004608.1-202ENST00000533390 NYXQ9GZU5 481 aa26.3■■□□□ 1.8
AP004608.1-202ENST00000533390 MED23Q9ULK4 1368 aa26.3■■□□□ 1.8
AP004608.1-202ENST00000533390 IGHMBP2P38935 993 aaKnown RBP26.3■■□□□ 1.8
AP004608.1-202ENST00000533390 ZNF772Q68DY9 489 aaPredicted RBP26.3■■□□□ 1.8
AP004608.1-202ENST00000533390 SRP68Q9UHB9 627 aaKnown RBP26.3■■□□□ 1.8
AP004608.1-202ENST00000533390 SNX14Q9Y5W7 946 aa26.3■■□□□ 1.8
AP004608.1-202ENST00000533390 CASZ1Q86V15 1759 aa26.29■■□□□ 1.8
AP004608.1-202ENST00000533390 KCNJ4P48050 445 aa26.29■■□□□ 1.8
AP004608.1-202ENST00000533390 ERFEQ4G0M1 354 aa26.29■■□□□ 1.8
AP004608.1-202ENST00000533390 ARHGEF1Q92888 912 aaKnown RBP26.29■■□□□ 1.8
AP004608.1-202ENST00000533390 SETDB2Q96T68 719 aa26.29■■□□□ 1.8
AP004608.1-202ENST00000533390 SEC31BQ9NQW1 1179 aa26.29■■□□□ 1.8
AP004608.1-202ENST00000533390 C4AP0C0L4 1744 aa26.29■■□□□ 1.8
AP004608.1-202ENST00000533390 COL24A1Q17RW2 1714 aa26.29■■□□□ 1.8
AP004608.1-202ENST00000533390 TRAPPC3LQ5T215 181 aa26.28■■□□□ 1.8
AP004608.1-202ENST00000533390 MAP4K1Q92918 833 aa26.28■■□□□ 1.8
AP004608.1-202ENST00000533390 RFC4P35249 363 aa26.27■■□□□ 1.8
AP004608.1-202ENST00000533390 LRRFIP1Q32MZ4 808 aaKnown RBP26.27■■□□□ 1.8
AP004608.1-202ENST00000533390 CDC5LQ99459 802 aaKnown RBP26.27■■□□□ 1.8
AP004608.1-202ENST00000533390 CIZ1Q9ULV3 898 aaPredicted RBP26.27■■□□□ 1.8
AP004608.1-202ENST00000533390 RBM6P78332 1123 aaKnown RBP26.26■■□□□ 1.79
AP004608.1-202ENST00000533390 FKBP4Q02790 459 aaKnown RBP eCLIP26.26■■□□□ 1.79
AP004608.1-202ENST00000533390 PUM3Q15397 648 aaKnown RBP26.26■■□□□ 1.79
AP004608.1-202ENST00000533390 PRPF40BQ6NWY9 871 aaKnown RBP26.26■■□□□ 1.79
AP004608.1-202ENST00000533390 FOXD4L1Q9NU39 408 aa26.26■■□□□ 1.79
AP004608.1-202ENST00000533390 RBM8AQ9Y5S9 174 aaKnown RBP26.26■■□□□ 1.79
AP004608.1-202ENST00000533390 ARAP2Q8WZ64 1704 aa26.26■■□□□ 1.79
AP004608.1-202ENST00000533390 MCMDC2Q4G0Z9 681 aa26.25■■□□□ 1.79
AP004608.1-202ENST00000533390 LPIN2Q92539 896 aa26.25■■□□□ 1.79
AP004608.1-202ENST00000533390 PHF14O94880 888 aa26.25■■□□□ 1.79
AP004608.1-202ENST00000533390 ZKSCAN1P17029 563 aaPredicted RBP26.25■■□□□ 1.79
AP004608.1-202ENST00000533390 DDIT3P35638 169 aa26.25■■□□□ 1.79
AP004608.1-202ENST00000533390 NECTIN1Q15223 517 aa26.25■■□□□ 1.79
AP004608.1-202ENST00000533390 SLC27A3Q5K4L6 730 aa26.25■■□□□ 1.79
AP004608.1-202ENST00000533390 ZNF589Q86UQ0 364 aaPredicted RBP26.25■■□□□ 1.79
AP004608.1-202ENST00000533390 SF3B3Q15393 1217 aaKnown RBP26.24■■□□□ 1.79
AP004608.1-202ENST00000533390 SLC10A5Q5PT55 438 aa26.24■■□□□ 1.79
AP004608.1-202ENST00000533390 NBPF5PQ86XG9 351 aaPredicted RBP26.24■■□□□ 1.79
AP004608.1-202ENST00000533390 RASEFQ8IZ41 740 aa26.24■■□□□ 1.79
AP004608.1-202ENST00000533390 UPF3BQ9BZI7 483 aaKnown RBP26.24■■□□□ 1.79
AP004608.1-202ENST00000533390 HELLSQ9NRZ9 838 aa26.24■■□□□ 1.79
AP004608.1-202ENST00000533390 LRRC4BQ9NT99 713 aa26.24■■□□□ 1.79
AP004608.1-202ENST00000533390 TRIM37O94972 964 aa26.23■■□□□ 1.79
AP004608.1-202ENST00000533390 RNF20Q5VTR2 975 aa26.23■■□□□ 1.79
AP004608.1-202ENST00000533390 KCNB2Q92953 911 aa26.23■■□□□ 1.79
AP004608.1-202ENST00000533390 ZNF512BQ96KM6 892 aaPredicted RBP26.23■■□□□ 1.79
AP004608.1-202ENST00000533390 SLC5A1P13866 664 aa26.23■■□□□ 1.79
AP004608.1-202ENST00000533390 ADRA2BP18089 450 aa26.23■■□□□ 1.79
AP004608.1-202ENST00000533390 HELBQ8NG08 1087 aaPredicted RBP26.23■■□□□ 1.79
AP004608.1-202ENST00000533390 TPTE2Q6XPS3 522 aa26.22■■□□□ 1.79
AP004608.1-202ENST00000533390 AMIGO3Q86WK7 504 aa26.22■■□□□ 1.79
AP004608.1-202ENST00000533390 UBR3Q6ZT12 1888 aa26.22■■□□□ 1.79
AP004608.1-202ENST00000533390 MYH7P12883 1935 aa26.22■■□□□ 1.79
AP004608.1-202ENST00000533390 RNF113AO15541 343 aaKnown RBP26.21■■□□□ 1.79
AP004608.1-202ENST00000533390 TAF5LO75529 589 aa26.21■■□□□ 1.79
AP004608.1-202ENST00000533390 FGFR2P21802 821 aa26.21■■□□□ 1.79
AP004608.1-202ENST00000533390 SSFA2P28290 1259 aa26.21■■□□□ 1.79
AP004608.1-202ENST00000533390 CREB3L3Q68CJ9 461 aa26.21■■□□□ 1.79
AP004608.1-202ENST00000533390 AKAP11Q9UKA4 1901 aa26.21■■□□□ 1.79
AP004608.1-202ENST00000533390 UQCRFS1P1P0C7P4 283 aa26.21■■□□□ 1.79
AP004608.1-202ENST00000533390 HMGB2P26583 209 aaKnown RBP26.21■■□□□ 1.79
AP004608.1-202ENST00000533390 ANKRD18AQ8IVF6 992 aa26.21■■□□□ 1.79
AP004608.1-202ENST00000533390 FRAT2O75474 233 aaPredicted RBP26.2■■□□□ 1.78
AP004608.1-202ENST00000533390 ZAP70P43403 619 aa26.2■■□□□ 1.78
AP004608.1-202ENST00000533390 ZMYM1Q5SVZ6 1142 aa26.2■■□□□ 1.78
AP004608.1-202ENST00000533390 SEC62Q99442 399 aaKnown RBP26.2■■□□□ 1.78
AP004608.1-202ENST00000533390 SCARF1Q14162 830 aa26.19■■□□□ 1.78
AP004608.1-202ENST00000533390 NLRP3Q96P20 1036 aa26.19■■□□□ 1.78
AP004608.1-202ENST00000533390 TM6SF1Q9BZW5 370 aa26.19■■□□□ 1.78
AP004608.1-202ENST00000533390 SLC27A2O14975 620 aa26.19■■□□□ 1.78
AP004608.1-202ENST00000533390 ZFYP08048 801 aaPredicted RBP26.19■■□□□ 1.78
AP004608.1-202ENST00000533390 CASTP20810 708 aaKnown RBP26.19■■□□□ 1.78
AP004608.1-202ENST00000533390 CCDC102BQ68D86 513 aa26.19■■□□□ 1.78
AP004608.1-202ENST00000533390 TMX3Q96JJ7 454 aa26.19■■□□□ 1.78
AP004608.1-202ENST00000533390 HMG20BQ9P0W2 317 aa26.19■■□□□ 1.78
AP004608.1-202ENST00000533390 NPHP1O15259 732 aa26.18■■□□□ 1.78
AP004608.1-202ENST00000533390 CHGBP05060 677 aa26.18■■□□□ 1.78
AP004608.1-202ENST00000533390 MCAMP43121 646 aa26.18■■□□□ 1.78
AP004608.1-202ENST00000533390 CCDC129Q6ZRS4 1044 aa26.18■■□□□ 1.78
AP004608.1-202ENST00000533390 JAKMIP1Q96N16 626 aaKnown RBP26.18■■□□□ 1.78
AP004608.1-202ENST00000533390 CWC22Q9HCG8 908 aaKnown RBP26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms