RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 TAF1P21675 1872 aa7.84□□□□□ -1.15
FAM49B-228ENST00000523993 NPHP1O15259 732 aa7.84□□□□□ -1.15
FAM49B-228ENST00000523993 NTSR2O95665 410 aa7.84□□□□□ -1.15
FAM49B-228ENST00000523993 FKBP4Q02790 459 aaKnown RBP eCLIP7.84□□□□□ -1.15
FAM49B-228ENST00000523993 MMRN1Q13201 1228 aa7.84□□□□□ -1.15
FAM49B-228ENST00000523993 ERFEQ4G0M1 354 aa7.84□□□□□ -1.15
FAM49B-228ENST00000523993 PARP10Q53GL7 1025 aa7.84□□□□□ -1.15
FAM49B-228ENST00000523993 CCDC93Q567U6 631 aa7.84□□□□□ -1.15
FAM49B-228ENST00000523993 CC2D2BQ6DHV5 1058 aa7.84□□□□□ -1.15
FAM49B-228ENST00000523993 C16orf71Q8IYS4 520 aaPredicted RBP7.84□□□□□ -1.15
FAM49B-228ENST00000523993 RTKN2Q8IZC4 609 aa7.84□□□□□ -1.15
FAM49B-228ENST00000523993 L3MBTL3Q96JM7 780 aaPredicted RBP7.84□□□□□ -1.15
FAM49B-228ENST00000523993 PSMD1Q99460 953 aa7.84□□□□□ -1.15
FAM49B-228ENST00000523993 ADAMTS8Q9UP79 889 aa7.84□□□□□ -1.15
FAM49B-228ENST00000523993 RRP7AQ9Y3A4 280 aaKnown RBP7.84□□□□□ -1.15
FAM49B-228ENST00000523993 ZNF853P0CG23 659 aa7.83□□□□□ -1.16
FAM49B-228ENST00000523993 MYL6BP14649 208 aa7.83□□□□□ -1.16
FAM49B-228ENST00000523993 SUSD4Q5VX71 490 aa7.83□□□□□ -1.16
FAM49B-228ENST00000523993 JMYQ8N9B5 988 aa7.83□□□□□ -1.16
FAM49B-228ENST00000523993 DDX12PQ92771 950 aa7.83□□□□□ -1.16
FAM49B-228ENST00000523993 CRAMP1Q96RY5 1269 aa7.83□□□□□ -1.16
FAM49B-228ENST00000523993 DDX21Q9NR30 783 aaKnown RBP eCLIP7.83□□□□□ -1.16
FAM49B-228ENST00000523993 MYH3P11055 1940 aa7.82□□□□□ -1.16
FAM49B-228ENST00000523993 C2orf72A6NCS6 295 aa7.82□□□□□ -1.16
FAM49B-228ENST00000523993 FZD9O00144 591 aa7.82□□□□□ -1.16
FAM49B-228ENST00000523993 WDR43Q15061 677 aaKnown RBP eCLIP7.82□□□□□ -1.16
FAM49B-228ENST00000523993 PROSER3Q2NL68 480 aa7.82□□□□□ -1.16
FAM49B-228ENST00000523993 HSP90AB3PQ58FF7 597 aa7.82□□□□□ -1.16
FAM49B-228ENST00000523993 PPP1R42Q7Z4L9 355 aa7.82□□□□□ -1.16
FAM49B-228ENST00000523993 NUTM1Q86Y26 1132 aa7.82□□□□□ -1.16
FAM49B-228ENST00000523993 NECTIN2Q92692 538 aa7.82□□□□□ -1.16
FAM49B-228ENST00000523993 REPIN1Q9BWE0 567 aaKnown RBP7.82□□□□□ -1.16
FAM49B-228ENST00000523993 VPS33BQ9H267 617 aa7.82□□□□□ -1.16
FAM49B-228ENST00000523993 ZBTB3Q9H5J0 574 aa7.82□□□□□ -1.16
FAM49B-228ENST00000523993 COL4A5P29400 1685 aa7.82□□□□□ -1.16
FAM49B-228ENST00000523993 TRPM7Q96QT4 1865 aa7.81□□□□□ -1.16
FAM49B-228ENST00000523993 LTBP1Q14766 1721 aa7.81□□□□□ -1.16
FAM49B-228ENST00000523993 GTF2E1P29083 439 aaPredicted RBP7.81□□□□□ -1.16
FAM49B-228ENST00000523993 TCIRG1Q13488 830 aa7.81□□□□□ -1.16
FAM49B-228ENST00000523993 SPNS2Q8IVW8 549 aa7.81□□□□□ -1.16
FAM49B-228ENST00000523993 CCDC146Q8IYE0 955 aa7.81□□□□□ -1.16
FAM49B-228ENST00000523993 NGEFQ8N5V2 710 aa7.81□□□□□ -1.16
FAM49B-228ENST00000523993 KLRG1Q96E93 195 aa7.81□□□□□ -1.16
FAM49B-228ENST00000523993 IQCA1LA6NCM1 817 aa7.8□□□□□ -1.16
FAM49B-228ENST00000523993 DDNO94850 711 aaPredicted RBP7.8□□□□□ -1.16
FAM49B-228ENST00000523993 EIF2S2P20042 333 aaKnown RBP7.8□□□□□ -1.16
FAM49B-228ENST00000523993 GPTP24298 496 aa7.8□□□□□ -1.16
FAM49B-228ENST00000523993 IARSP41252 1262 aaKnown RBP7.8□□□□□ -1.16
FAM49B-228ENST00000523993 PTGDRQ13258 359 aa7.8□□□□□ -1.16
FAM49B-228ENST00000523993 TRIM28Q13263 835 aaKnown RBP7.8□□□□□ -1.16
FAM49B-228ENST00000523993 SH3D19Q5HYK7 790 aa7.8□□□□□ -1.16
FAM49B-228ENST00000523993 COPS6Q7L5N1 327 aa7.8□□□□□ -1.16
FAM49B-228ENST00000523993 NLRP10Q86W26 655 aa7.8□□□□□ -1.16
FAM49B-228ENST00000523993 PDCD7Q8N8D1 485 aaKnown RBP7.8□□□□□ -1.16
FAM49B-228ENST00000523993 RPGRQ92834 1020 aaKnown RBP7.8□□□□□ -1.16
FAM49B-228ENST00000523993 RBM17Q96I25 401 aaKnown RBP7.8□□□□□ -1.16
FAM49B-228ENST00000523993 NLRP3Q96P20 1036 aa7.8□□□□□ -1.16
FAM49B-228ENST00000523993 UTP14AQ9BVJ6 771 aaKnown RBP7.8□□□□□ -1.16
FAM49B-228ENST00000523993 DBF4Q9UBU7 674 aaPredicted RBP7.8□□□□□ -1.16
FAM49B-228ENST00000523993 PSME4Q14997 1843 aa7.8□□□□□ -1.16
FAM49B-228ENST00000523993 FAM177BA6PVY3 158 aa7.79□□□□□ -1.16
FAM49B-228ENST00000523993 BBOX1O75936 387 aa7.79□□□□□ -1.16
FAM49B-228ENST00000523993 ANXA1P04083 346 aa7.79□□□□□ -1.16
FAM49B-228ENST00000523993 CALD1Q05682 793 aaKnown RBP7.79□□□□□ -1.16
FAM49B-228ENST00000523993 KRT24Q2M2I5 525 aa7.79□□□□□ -1.16
FAM49B-228ENST00000523993 OLFM4Q6UX06 510 aa7.79□□□□□ -1.16
FAM49B-228ENST00000523993 C3orf67Q6ZVT6 689 aa7.79□□□□□ -1.16
FAM49B-228ENST00000523993 GPC2Q8N158 579 aa7.79□□□□□ -1.16
FAM49B-228ENST00000523993 SYNE4Q8N205 404 aa7.79□□□□□ -1.16
FAM49B-228ENST00000523993 PLBD2Q8NHP8 589 aa7.79□□□□□ -1.16
FAM49B-228ENST00000523993 XAGE3Q8WTP9 111 aa7.79□□□□□ -1.16
FAM49B-228ENST00000523993 ISCA1Q9BUE6 129 aa7.79□□□□□ -1.16
FAM49B-228ENST00000523993 RTFDC1Q9BY42 306 aaPredicted RBP7.79□□□□□ -1.16
FAM49B-228ENST00000523993 TAF1DQ9H5J8 278 aaPredicted RBP7.79□□□□□ -1.16
FAM49B-228ENST00000523993 ZNF277Q9NRM2 450 aaPredicted RBP7.79□□□□□ -1.16
FAM49B-228ENST00000523993 MBIPQ9NS73 344 aa7.79□□□□□ -1.16
FAM49B-228ENST00000523993 IFT57Q9NWB7 429 aa7.79□□□□□ -1.16
FAM49B-228ENST00000523993 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.79□□□□□ -1.16
FAM49B-228ENST00000523993 ATP6V0A2Q9Y487 856 aa7.79□□□□□ -1.16
FAM49B-228ENST00000523993 DUOX1Q9NRD9 1551 aa7.79□□□□□ -1.16
FAM49B-228ENST00000523993 PASKQ96RG2 1323 aa7.78□□□□□ -1.16
FAM49B-228ENST00000523993 ZNF541Q9H0D2 1346 aa7.78□□□□□ -1.16
FAM49B-228ENST00000523993 APAF1O14727 1248 aa7.78□□□□□ -1.16
FAM49B-228ENST00000523993 PPEF1O14829 653 aaPredicted RBP7.78□□□□□ -1.16
FAM49B-228ENST00000523993 GNAI1P63096 354 aa7.78□□□□□ -1.16
FAM49B-228ENST00000523993 CCDC27Q2M243 656 aa7.78□□□□□ -1.16
FAM49B-228ENST00000523993 HDGFL1Q5TGJ6 251 aa7.78□□□□□ -1.16
FAM49B-228ENST00000523993 DUSP27Q5VZP5 1158 aa7.78□□□□□ -1.16
FAM49B-228ENST00000523993 ANKRD13DQ6ZTN6 518 aa7.78□□□□□ -1.16
FAM49B-228ENST00000523993 TMC4Q7Z404 712 aa7.78□□□□□ -1.16
FAM49B-228ENST00000523993 LDHDQ86WU2 507 aa7.78□□□□□ -1.16
FAM49B-228ENST00000523993 SP8Q8IXZ3 490 aa7.78□□□□□ -1.16
FAM49B-228ENST00000523993 HYPKQ9NX55 129 aa7.78□□□□□ -1.16
FAM49B-228ENST00000523993 CHPF2Q9P2E5 772 aa7.78□□□□□ -1.16
FAM49B-228ENST00000523993 ABCC4O15439 1325 aa7.78□□□□□ -1.16
FAM49B-228ENST00000523993 SH3TC1Q8TE82 1336 aa7.78□□□□□ -1.16
FAM49B-228ENST00000523993 POLR2AP24928 1970 aaKnown RBP7.77□□□□□ -1.17
FAM49B-228ENST00000523993 ITGBL1O95965 494 aaPredicted RBP7.77□□□□□ -1.17
FAM49B-228ENST00000523993 SF3B3Q15393 1217 aaKnown RBP7.77□□□□□ -1.17
FAM49B-228ENST00000523993 IFFO2Q5TF58 517 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms