RNA–Protein interactions for RNA: ENST00000516316.1

RNU6-1299P-201, Transcript of RNA, U6 small nuclear 1299, pseudogene, humanhuman

BASIC

Gene RNU6-1299P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1299P-201ENST00000516316 LCE3BQ5TA77 95 aa3.59□□□□□ -1.83
RNU6-1299P-201ENST00000516316 GDF6Q6KF10 455 aaPredicted RBP3.59□□□□□ -1.83
RNU6-1299P-201ENST00000516316 NLRP13Q86W25 1043 aa3.59□□□□□ -1.83
RNU6-1299P-201ENST00000516316 KRTAP19-1Q8IUB9 90 aa3.59□□□□□ -1.83
RNU6-1299P-201ENST00000516316 PRIMPOLQ96LW4 560 aa3.59□□□□□ -1.83
RNU6-1299P-201ENST00000516316 NSUN5Q96P11 429 aaKnown RBP3.59□□□□□ -1.83
RNU6-1299P-201ENST00000516316 SRA1Q9HD15 236 aaKnown RBP3.59□□□□□ -1.83
RNU6-1299P-201ENST00000516316 TRIM33Q9UPN9 1127 aa3.59□□□□□ -1.83
RNU6-1299P-201ENST00000516316 TNFRSF10BO14763 440 aa3.58□□□□□ -1.84
RNU6-1299P-201ENST00000516316 GHRHP01286 108 aa3.58□□□□□ -1.84
RNU6-1299P-201ENST00000516316 SRPK2P78362 688 aaKnown RBP3.58□□□□□ -1.84
RNU6-1299P-201ENST00000516316 SWI5Q1ZZU3 235 aa3.58□□□□□ -1.84
RNU6-1299P-201ENST00000516316 COL13A1Q5TAT6 717 aaPredicted RBP3.58□□□□□ -1.84
RNU6-1299P-201ENST00000516316 ADAMTSL4Q6UY14 1074 aa3.58□□□□□ -1.84
RNU6-1299P-201ENST00000516316 MAP4K3Q8IVH8 894 aa3.58□□□□□ -1.84
RNU6-1299P-201ENST00000516316 CACTIN-AS1Q8N1I8 211 aa3.58□□□□□ -1.84
RNU6-1299P-201ENST00000516316 GALNT11Q8NCW6 608 aa3.58□□□□□ -1.84
RNU6-1299P-201ENST00000516316 OR13H1Q8NG92 308 aa3.58□□□□□ -1.84
RNU6-1299P-201ENST00000516316 COL26A1Q96A83 441 aa3.58□□□□□ -1.84
RNU6-1299P-201ENST00000516316 UBL7Q96S82 380 aaPredicted RBP3.58□□□□□ -1.84
RNU6-1299P-201ENST00000516316 ZMIZ1Q9ULJ6 1067 aa3.58□□□□□ -1.84
RNU6-1299P-201ENST00000516316 NOVA2Q9UNW9 492 aaKnown RBP3.58□□□□□ -1.84
RNU6-1299P-201ENST00000516316 ACIN1Q9UKV3 1341 aaKnown RBP3.58□□□□□ -1.84
RNU6-1299P-201ENST00000516316 MED26O95402 600 aa3.57□□□□□ -1.84
RNU6-1299P-201ENST00000516316 BRD2P25440 801 aaKnown RBP3.57□□□□□ -1.84
RNU6-1299P-201ENST00000516316 CD97P48960 835 aa3.57□□□□□ -1.84
RNU6-1299P-201ENST00000516316 ELOAQ14241 798 aaKnown RBP3.57□□□□□ -1.84
RNU6-1299P-201ENST00000516316 C16orf46Q6P387 395 aa3.57□□□□□ -1.84
RNU6-1299P-201ENST00000516316 CAPN12Q6ZSI9 719 aa3.57□□□□□ -1.84
RNU6-1299P-201ENST00000516316 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.57□□□□□ -1.84
RNU6-1299P-201ENST00000516316 AGGF1Q8N302 714 aaeCLIP3.57□□□□□ -1.84
RNU6-1299P-201ENST00000516316 ZNF777Q9ULD5 760 aaPredicted RBP3.57□□□□□ -1.84
RNU6-1299P-201ENST00000516316 PRMT3O60678 531 aa3.56□□□□□ -1.84
RNU6-1299P-201ENST00000516316 WISP1O95388 367 aa3.56□□□□□ -1.84
RNU6-1299P-201ENST00000516316 RFX1P22670 979 aa3.56□□□□□ -1.84
RNU6-1299P-201ENST00000516316 MCTP1Q6DN14 999 aa3.56□□□□□ -1.84
RNU6-1299P-201ENST00000516316 ARMC10Q8N2F6 343 aa3.56□□□□□ -1.84
RNU6-1299P-201ENST00000516316 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
RNU6-1299P-201ENST00000516316 KRTAP9-4Q9BYQ2 154 aa3.56□□□□□ -1.84
RNU6-1299P-201ENST00000516316 MUC3BQ9H195 1237 aa3.56□□□□□ -1.84
RNU6-1299P-201ENST00000516316 KCNK4Q9NYG8 393 aa3.56□□□□□ -1.84
RNU6-1299P-201ENST00000516316 CXXC1Q9P0U4 656 aaPredicted RBP3.56□□□□□ -1.84
RNU6-1299P-201ENST00000516316 RAXQ9Y2V3 346 aa3.56□□□□□ -1.84
RNU6-1299P-201ENST00000516316 PPME1Q9Y570 386 aa3.56□□□□□ -1.84
RNU6-1299P-201ENST00000516316 COL17A1Q9UMD9 1497 aaPredicted RBP3.55□□□□□ -1.84
RNU6-1299P-201ENST00000516316 UBAP1LF5GYI3 381 aa3.55□□□□□ -1.84
RNU6-1299P-201ENST00000516316 LINC01387J3KSC0 135 aa3.55□□□□□ -1.84
RNU6-1299P-201ENST00000516316 ZBTB39O15060 712 aa3.55□□□□□ -1.84
RNU6-1299P-201ENST00000516316 KIF4AO95239 1232 aa3.55□□□□□ -1.84
RNU6-1299P-201ENST00000516316 IGLV1-40P01703 118 aa3.55□□□□□ -1.84
RNU6-1299P-201ENST00000516316 SSTR4P31391 388 aa3.55□□□□□ -1.84
RNU6-1299P-201ENST00000516316 ATP11AP98196 1134 aa3.55□□□□□ -1.84
RNU6-1299P-201ENST00000516316 HYAL2Q12891 473 aa3.55□□□□□ -1.84
RNU6-1299P-201ENST00000516316 DCAF11Q8TEB1 546 aa3.55□□□□□ -1.84
RNU6-1299P-201ENST00000516316 STK32AQ8WU08 396 aa3.55□□□□□ -1.84
RNU6-1299P-201ENST00000516316 PIK3R5Q8WYR1 880 aa3.55□□□□□ -1.84
RNU6-1299P-201ENST00000516316 RBSNQ9H1K0 784 aa3.55□□□□□ -1.84
RNU6-1299P-201ENST00000516316 PCMTD2Q9NV79 361 aa3.55□□□□□ -1.84
RNU6-1299P-201ENST00000516316 KIAA1324LA8MWY0 1029 aaPredicted RBP3.54□□□□□ -1.84
RNU6-1299P-201ENST00000516316 CYP2E1P05181 493 aaPredicted RBP3.54□□□□□ -1.84
RNU6-1299P-201ENST00000516316 GLB1P16278 677 aa3.54□□□□□ -1.84
RNU6-1299P-201ENST00000516316 CDC27P30260 824 aa3.54□□□□□ -1.84
RNU6-1299P-201ENST00000516316 CD68P34810 354 aaPredicted RBP3.54□□□□□ -1.84
RNU6-1299P-201ENST00000516316 ZAP70P43403 619 aa3.54□□□□□ -1.84
RNU6-1299P-201ENST00000516316 TXNDC11Q6PKC3 985 aa3.54□□□□□ -1.84
RNU6-1299P-201ENST00000516316 KIAA1211Q6ZU35 1233 aa3.54□□□□□ -1.84
RNU6-1299P-201ENST00000516316 CEP120Q8N960 986 aa3.54□□□□□ -1.84
RNU6-1299P-201ENST00000516316 FAM46AQ96IP4 442 aaKnown RBP3.54□□□□□ -1.84
RNU6-1299P-201ENST00000516316 ADAM19Q9H013 955 aa3.54□□□□□ -1.84
RNU6-1299P-201ENST00000516316 RASSF4Q9H2L5 321 aa3.54□□□□□ -1.84
RNU6-1299P-201ENST00000516316 GOLGA2P5Q9HBQ8 144 aa3.54□□□□□ -1.84
RNU6-1299P-201ENST00000516316 SLAIN2Q9P270 581 aa3.54□□□□□ -1.84
RNU6-1299P-201ENST00000516316 STOML1Q9UBI4 398 aa3.54□□□□□ -1.84
RNU6-1299P-201ENST00000516316 FSCN2O14926 492 aa3.53□□□□□ -1.84
RNU6-1299P-201ENST00000516316 GSC2O15499 205 aa3.53□□□□□ -1.84
RNU6-1299P-201ENST00000516316 ADAM11O75078 769 aa3.53□□□□□ -1.84
RNU6-1299P-201ENST00000516316 ATG7O95352 703 aa3.53□□□□□ -1.84
RNU6-1299P-201ENST00000516316 TGFB1P01137 390 aa3.53□□□□□ -1.84
RNU6-1299P-201ENST00000516316 NAA30Q147X3 362 aaPredicted RBP3.53□□□□□ -1.84
RNU6-1299P-201ENST00000516316 TTC39BQ5VTQ0 682 aaPredicted RBP3.53□□□□□ -1.84
RNU6-1299P-201ENST00000516316 CEP135Q66GS9 1140 aa3.53□□□□□ -1.84
RNU6-1299P-201ENST00000516316 ZDHHC13Q8IUH4 622 aa3.53□□□□□ -1.84
RNU6-1299P-201ENST00000516316 KLHL23Q8NBE8 558 aa3.53□□□□□ -1.84
RNU6-1299P-201ENST00000516316 FOXD4L4Q8WXT5 416 aaPredicted RBP3.53□□□□□ -1.84
RNU6-1299P-201ENST00000516316 FMNL2Q96PY5 1086 aa3.53□□□□□ -1.84
RNU6-1299P-201ENST00000516316 POP1Q99575 1024 aaKnown RBP3.53□□□□□ -1.84
RNU6-1299P-201ENST00000516316 PBX4Q9BYU1 374 aa3.53□□□□□ -1.84
RNU6-1299P-201ENST00000516316 LACRTQ9GZZ8 138 aa3.53□□□□□ -1.84
RNU6-1299P-201ENST00000516316 SH2B1Q9NRF2 756 aaPredicted RBP3.53□□□□□ -1.84
RNU6-1299P-201ENST00000516316 FAM13BQ9NYF5 915 aa3.53□□□□□ -1.84
RNU6-1299P-201ENST00000516316 STIM2Q9P246 746 aa3.53□□□□□ -1.84
RNU6-1299P-201ENST00000516316 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.53□□□□□ -1.84
RNU6-1299P-201ENST00000516316 PRR19A6NJB7 356 aa3.52□□□□□ -1.85
RNU6-1299P-201ENST00000516316 NFKBIEO00221 500 aa3.52□□□□□ -1.85
RNU6-1299P-201ENST00000516316 DDX3YO15523 660 aaKnown RBP3.52□□□□□ -1.85
RNU6-1299P-201ENST00000516316 DHX15O43143 795 aaKnown RBP3.52□□□□□ -1.85
RNU6-1299P-201ENST00000516316 PTCD1O75127 700 aaKnown RBP3.52□□□□□ -1.85
RNU6-1299P-201ENST00000516316 COBLO75128 1261 aa3.52□□□□□ -1.85
RNU6-1299P-201ENST00000516316 ADAMTS4O75173 837 aa3.52□□□□□ -1.85
RNU6-1299P-201ENST00000516316 SMNDC1O75940 238 aaKnown RBP eCLIP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms