RNA–Protein interactions for RNA: ENST00000504233.5

PAPD4-207, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 1 (best) BASIC

Gene PAPD4, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-207ENST00000504233 ZFP91Q96JP5 570 aaPredicted RBP13.38□□□□□ -0.27
PAPD4-207ENST00000504233 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.38□□□□□ -0.274e-7■□□□□ 10.8
PAPD4-207ENST00000504233 ALS2Q96Q42 1657 aa13.38□□□□□ -0.27
PAPD4-207ENST00000504233 CYP21A2P08686 494 aa13.37□□□□□ -0.27
PAPD4-207ENST00000504233 LIG1P18858 919 aa13.37□□□□□ -0.27
PAPD4-207ENST00000504233 RABL6Q3YEC7 729 aaPredicted RBP13.37□□□□□ -0.27
PAPD4-207ENST00000504233 LRRC24Q50LG9 513 aa13.37□□□□□ -0.27
PAPD4-207ENST00000504233 Q6ZUG5 572 aa13.37□□□□□ -0.27
PAPD4-207ENST00000504233 SMAP1Q8IYB5 467 aaPredicted RBP13.37□□□□□ -0.27
PAPD4-207ENST00000504233 NEK1Q96PY6 1258 aa13.37□□□□□ -0.27
PAPD4-207ENST00000504233 AFDNP55196 1824 aaKnown RBP13.37□□□□□ -0.27
PAPD4-207ENST00000504233 ADAMTS7Q9UKP4 1686 aa13.37□□□□□ -0.27
PAPD4-207ENST00000504233 CASP7P55210 303 aa13.37□□□□□ -0.27
PAPD4-207ENST00000504233 PRDM11Q9NQV5 511 aa13.37□□□□□ -0.27
PAPD4-207ENST00000504233 CDK11BP21127 795 aaKnown RBP13.36□□□□□ -0.27
PAPD4-207ENST00000504233 KRT85P78386 507 aa13.36□□□□□ -0.27
PAPD4-207ENST00000504233 DMTNQ08495 405 aa13.36□□□□□ -0.27
PAPD4-207ENST00000504233 BRF1Q92994 677 aa13.36□□□□□ -0.27
PAPD4-207ENST00000504233 CCDC94Q9BW85 323 aaPredicted RBP13.36□□□□□ -0.27
PAPD4-207ENST00000504233 SNRKQ9NRH2 765 aa13.36□□□□□ -0.27
PAPD4-207ENST00000504233 STRN4Q9NRL3 753 aa13.36□□□□□ -0.27
PAPD4-207ENST00000504233 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.36□□□□□ -0.27
PAPD4-207ENST00000504233 V9GYY5 206 aaPredicted RBP13.36□□□□□ -0.27
PAPD4-207ENST00000504233 KIF1AQ12756 1690 aa13.36□□□□□ -0.27
PAPD4-207ENST00000504233 FOXO4P98177 505 aa13.36□□□□□ -0.27
PAPD4-207ENST00000504233 CEBPZQ03701 1054 aaKnown RBP13.36□□□□□ -0.27
PAPD4-207ENST00000504233 ANKRD1Q15327 319 aa13.36□□□□□ -0.27
PAPD4-207ENST00000504233 CKAP2LQ8IYA6 745 aa13.36□□□□□ -0.27
PAPD4-207ENST00000504233 ZNF500O60304 480 aaPredicted RBP13.35□□□□□ -0.27
PAPD4-207ENST00000504233 MCMDC2Q4G0Z9 681 aa13.35□□□□□ -0.27
PAPD4-207ENST00000504233 SASS6Q6UVJ0 657 aa13.35□□□□□ -0.27
PAPD4-207ENST00000504233 CHST3Q7LGC8 479 aa13.35□□□□□ -0.27
PAPD4-207ENST00000504233 HAUS7Q99871 368 aa13.35□□□□□ -0.27
PAPD4-207ENST00000504233 PUS3Q9BZE2 481 aaKnown RBP13.35□□□□□ -0.27
PAPD4-207ENST00000504233 CSPP1Q1MSJ5 1256 aa13.35□□□□□ -0.27
PAPD4-207ENST00000504233 STOX1Q6ZVD7 989 aa13.35□□□□□ -0.27
PAPD4-207ENST00000504233 HMG20BQ9P0W2 317 aa13.35□□□□□ -0.27
PAPD4-207ENST00000504233 ATG9AQ7Z3C6 839 aa13.35□□□□□ -0.27
PAPD4-207ENST00000504233 CWC25Q9NXE8 425 aaPredicted RBP13.35□□□□□ -0.27
PAPD4-207ENST00000504233 GOLGA6L4A6NEF3 574 aa13.34□□□□□ -0.27
PAPD4-207ENST00000504233 AP5Z1O43299 807 aa13.34□□□□□ -0.27
PAPD4-207ENST00000504233 FAM184AQ8NB25 1140 aa13.34□□□□□ -0.27
PAPD4-207ENST00000504233 ZCRB1Q8TBF4 217 aaKnown RBP13.34□□□□□ -0.27
PAPD4-207ENST00000504233 SPATA32Q96LK8 384 aa13.34□□□□□ -0.27
PAPD4-207ENST00000504233 SPATA31A3Q5VYP0 1347 aa13.34□□□□□ -0.27
PAPD4-207ENST00000504233 TNS3Q68CZ2 1445 aa13.34□□□□□ -0.27
PAPD4-207ENST00000504233 PDCP20941 246 aa13.34□□□□□ -0.27
PAPD4-207ENST00000504233 HSP90AB3PQ58FF7 597 aa13.34□□□□□ -0.27
PAPD4-207ENST00000504233 CADPS2Q86UW7 1296 aa13.34□□□□□ -0.27
PAPD4-207ENST00000504233 PAG1Q9NWQ8 432 aa13.34□□□□□ -0.27
PAPD4-207ENST00000504233 CCT2P78371 535 aaKnown RBP13.33□□□□□ -0.28
PAPD4-207ENST00000504233 USPL1Q5W0Q7 1092 aa13.33□□□□□ -0.28
PAPD4-207ENST00000504233 KBTBD3Q8NAB2 608 aa13.33□□□□□ -0.28
PAPD4-207ENST00000504233 FUCA2Q9BTY2 467 aa13.33□□□□□ -0.28
PAPD4-207ENST00000504233 DACT1Q9NYF0 836 aa13.33□□□□□ -0.28
PAPD4-207ENST00000504233 COL18A1P39060 1754 aa13.33□□□□□ -0.28
PAPD4-207ENST00000504233 ARFGEF2Q9Y6D5 1785 aa13.33□□□□□ -0.28
PAPD4-207ENST00000504233 MRC1P22897 1456 aa13.33□□□□□ -0.28
PAPD4-207ENST00000504233 H7C1W4 665 aa13.33□□□□□ -0.28
PAPD4-207ENST00000504233 DYNC1I1O14576 645 aa13.33□□□□□ -0.28
PAPD4-207ENST00000504233 LETM1O95202 739 aaPredicted RBP13.33□□□□□ -0.28
PAPD4-207ENST00000504233 GTF3C6Q969F1 213 aa13.33□□□□□ -0.28
PAPD4-207ENST00000504233 U3KPZ7 1027 aaPredicted RBP13.33□□□□□ -0.28
PAPD4-207ENST00000504233 H3BQV1 296 aa13.32□□□□□ -0.28
PAPD4-207ENST00000504233 FKBP4Q02790 459 aaKnown RBP eCLIP13.32□□□□□ -0.28
PAPD4-207ENST00000504233 APOBRQ0VD83 1088 aa13.32□□□□□ -0.28
PAPD4-207ENST00000504233 IFFO2Q5TF58 517 aa13.32□□□□□ -0.28
PAPD4-207ENST00000504233 NCOA5Q9HCD5 579 aaKnown RBP13.32□□□□□ -0.28
PAPD4-207ENST00000504233 KDM4AO75164 1064 aa13.32□□□□□ -0.28
PAPD4-207ENST00000504233 KIAA2012Q0VF49 1180 aa13.32□□□□□ -0.28
PAPD4-207ENST00000504233 SCRN1Q12765 414 aa13.32□□□□□ -0.28
PAPD4-207ENST00000504233 KRT32Q14532 448 aa13.32□□□□□ -0.28
PAPD4-207ENST00000504233 TTLL5Q6EMB2 1281 aa13.32□□□□□ -0.28
PAPD4-207ENST00000504233 ZNF592Q92610 1267 aa13.32□□□□□ -0.28
PAPD4-207ENST00000504233 FTOQ9C0B1 505 aaKnown RBP eCLIP13.32□□□□□ -0.28
PAPD4-207ENST00000504233 NUP62CLQ9H1M0 184 aa13.32□□□□□ -0.28
PAPD4-207ENST00000504233 GUCY1B3Q02153 619 aa13.32□□□□□ -0.28
PAPD4-207ENST00000504233 UVSSAQ2YD98 709 aa13.32□□□□□ -0.28
PAPD4-207ENST00000504233 BICD2Q8TD16 824 aa13.32□□□□□ -0.28
PAPD4-207ENST00000504233 LEO1Q8WVC0 666 aaPredicted RBP13.32□□□□□ -0.28
PAPD4-207ENST00000504233 JCADQ9P266 1359 aa13.31□□□□□ -0.28
PAPD4-207ENST00000504233 A0A1B0GUL7 405 aa13.31□□□□□ -0.28
PAPD4-207ENST00000504233 IFIT1P09914 478 aaKnown RBP13.31□□□□□ -0.28
PAPD4-207ENST00000504233 TSGA10IPQ3SY00 556 aa13.31□□□□□ -0.28
PAPD4-207ENST00000504233 BCL2L12Q9HB09 334 aa13.31□□□□□ -0.28
PAPD4-207ENST00000504233 KAT6BQ8WYB5 2073 aa13.31□□□□□ -0.28
PAPD4-207ENST00000504233 LUZP1Q86V48 1076 aa13.31□□□□□ -0.28
PAPD4-207ENST00000504233 CCDC192P0DO97 292 aa13.3□□□□□ -0.28
PAPD4-207ENST00000504233 ADORA1P30542 326 aa13.3□□□□□ -0.28
PAPD4-207ENST00000504233 HAND2P61296 217 aa13.3□□□□□ -0.28
PAPD4-207ENST00000504233 MAP3K11Q16584 847 aa13.3□□□□□ -0.28
PAPD4-207ENST00000504233 BRINP3Q76B58 766 aa13.3□□□□□ -0.28
PAPD4-207ENST00000504233 SYNE4Q8N205 404 aa13.3□□□□□ -0.28
PAPD4-207ENST00000504233 PDCL2Q8N4E4 241 aa13.3□□□□□ -0.28
PAPD4-207ENST00000504233 MAP7D2Q96T17 732 aa13.3□□□□□ -0.28
PAPD4-207ENST00000504233 GPHNQ9NQX3 736 aaPredicted RBP13.3□□□□□ -0.28
PAPD4-207ENST00000504233 STRCP1A6NGW2 1772 aa13.3□□□□□ -0.28
PAPD4-207ENST00000504233 PCDH11XQ9BZA7 1347 aa13.3□□□□□ -0.28
PAPD4-207ENST00000504233 PCDH11YQ9BZA8 1340 aa13.3□□□□□ -0.28
PAPD4-207ENST00000504233 EYA2O00167 538 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms