RNA–Protein interactions for RNA: ENST00000490464.1

ACSS2-219, Transcript of acyl-CoA synthetase short chain family member 2, humanhuman

TSL 3

Gene ACSS2, Length 280 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS2-219ENST00000490464 SETDB2Q96T68 719 aa13.14□□□□□ -0.31
ACSS2-219ENST00000490464 CDC5LQ99459 802 aaKnown RBP13.14□□□□□ -0.31
ACSS2-219ENST00000490464 RIC1Q4ADV7 1423 aa13.13□□□□□ -0.31
ACSS2-219ENST00000490464 C4BP0C0L5 1744 aa13.13□□□□□ -0.31
ACSS2-219ENST00000490464 DDX60Q8IY21 1712 aaKnown RBP13.13□□□□□ -0.31
ACSS2-219ENST00000490464 PDE8BO95263 885 aa13.13□□□□□ -0.31
ACSS2-219ENST00000490464 KCNJ4P48050 445 aa13.13□□□□□ -0.31
ACSS2-219ENST00000490464 SPRYD3Q8NCJ5 442 aa13.13□□□□□ -0.31
ACSS2-219ENST00000490464 ANTXR1Q9H6X2 564 aa13.13□□□□□ -0.31
ACSS2-219ENST00000490464 CIZ1Q9ULV3 898 aaPredicted RBP13.13□□□□□ -0.31
ACSS2-219ENST00000490464 TAF1LQ8IZX4 1826 aa13.13□□□□□ -0.31
ACSS2-219ENST00000490464 CCDC171Q6TFL3 1326 aa13.13□□□□□ -0.31
ACSS2-219ENST00000490464 UQCRFS1P1P0C7P4 283 aa13.12□□□□□ -0.31
ACSS2-219ENST00000490464 SLC5A1P13866 664 aa13.12□□□□□ -0.31
ACSS2-219ENST00000490464 ZKSCAN1P17029 563 aaPredicted RBP13.12□□□□□ -0.31
ACSS2-219ENST00000490464 RFC4P35249 363 aa13.12□□□□□ -0.31
ACSS2-219ENST00000490464 NEK4P51957 841 aa13.12□□□□□ -0.31
ACSS2-219ENST00000490464 NBR1Q14596 966 aa13.12□□□□□ -0.31
ACSS2-219ENST00000490464 PUM3Q15397 648 aaKnown RBP13.12□□□□□ -0.31
ACSS2-219ENST00000490464 SLC10A5Q5PT55 438 aa13.12□□□□□ -0.31
ACSS2-219ENST00000490464 RNF20Q5VTR2 975 aa13.12□□□□□ -0.31
ACSS2-219ENST00000490464 TBC1D9BQ66K14 1250 aa13.12□□□□□ -0.31
ACSS2-219ENST00000490464 LPIN2Q92539 896 aa13.12□□□□□ -0.31
ACSS2-219ENST00000490464 ZNF512BQ96KM6 892 aaPredicted RBP13.12□□□□□ -0.31
ACSS2-219ENST00000490464 FAM227BQ96M60 508 aa13.12□□□□□ -0.31
ACSS2-219ENST00000490464 IL25Q9H293 177 aa13.12□□□□□ -0.31
ACSS2-219ENST00000490464 HELLSQ9NRZ9 838 aa13.12□□□□□ -0.31
ACSS2-219ENST00000490464 MED23Q9ULK4 1368 aa13.11□□□□□ -0.31
ACSS2-219ENST00000490464 GOLIM4O00461 696 aa13.11□□□□□ -0.31
ACSS2-219ENST00000490464 ZFYP08048 801 aaPredicted RBP13.11□□□□□ -0.31
ACSS2-219ENST00000490464 SF3B3Q15393 1217 aaKnown RBP13.11□□□□□ -0.31
ACSS2-219ENST00000490464 ERFEQ4G0M1 354 aa13.11□□□□□ -0.31
ACSS2-219ENST00000490464 MCMDC2Q4G0Z9 681 aa13.11□□□□□ -0.31
ACSS2-219ENST00000490464 TPTE2Q6XPS3 522 aa13.11□□□□□ -0.31
ACSS2-219ENST00000490464 BICDL1Q6ZP65 573 aa13.11□□□□□ -0.31
ACSS2-219ENST00000490464 DDX46Q7L014 1031 aaKnown RBP13.11□□□□□ -0.31
ACSS2-219ENST00000490464 NBPF5PQ86XG9 351 aaPredicted RBP13.11□□□□□ -0.31
ACSS2-219ENST00000490464 ARHGEF1Q92888 912 aaKnown RBP13.11□□□□□ -0.31
ACSS2-219ENST00000490464 BCL2L12Q9HB09 334 aa13.11□□□□□ -0.31
ACSS2-219ENST00000490464 SNX14Q9Y5W7 946 aa13.11□□□□□ -0.31
ACSS2-219ENST00000490464 A0A0D9SFI3 127 aa13.1□□□□□ -0.31
ACSS2-219ENST00000490464 CD2BP2O95400 341 aaKnown RBP13.1□□□□□ -0.31
ACSS2-219ENST00000490464 SSFA2P28290 1259 aa13.1□□□□□ -0.31
ACSS2-219ENST00000490464 TTF1Q15361 905 aaPredicted RBP13.1□□□□□ -0.31
ACSS2-219ENST00000490464 ZSCAN25Q6NSZ9 544 aa13.1□□□□□ -0.31
ACSS2-219ENST00000490464 ANKRD18AQ8IVF6 992 aa13.1□□□□□ -0.31
ACSS2-219ENST00000490464 VGLL2Q8N8G2 317 aa13.1□□□□□ -0.31
ACSS2-219ENST00000490464 MAP4K1Q92918 833 aa13.1□□□□□ -0.31
ACSS2-219ENST00000490464 KCNB2Q92953 911 aa13.1□□□□□ -0.31
ACSS2-219ENST00000490464 EDC3Q96F86 508 aaKnown RBP13.1□□□□□ -0.31
ACSS2-219ENST00000490464 SRP68Q9UHB9 627 aaKnown RBP13.1□□□□□ -0.31
ACSS2-219ENST00000490464 PALD1Q9ULE6 856 aa13.1□□□□□ -0.31
ACSS2-219ENST00000490464 COL24A1Q17RW2 1714 aa13.1□□□□□ -0.31
ACSS2-219ENST00000490464 RNF113AO15541 343 aaKnown RBP13.09□□□□□ -0.31
ACSS2-219ENST00000490464 PSMA5P28066 241 aa13.09□□□□□ -0.31
ACSS2-219ENST00000490464 ADORA1P30542 326 aa13.09□□□□□ -0.31
ACSS2-219ENST00000490464 FKBP4Q02790 459 aaKnown RBP eCLIP13.09□□□□□ -0.31
ACSS2-219ENST00000490464 PTH1RQ03431 593 aa13.09□□□□□ -0.31
ACSS2-219ENST00000490464 NFKBIBQ15653 356 aa13.09□□□□□ -0.31
ACSS2-219ENST00000490464 NLRP3Q96P20 1036 aa13.09□□□□□ -0.31
ACSS2-219ENST00000490464 TM6SF1Q9BZW5 370 aa13.09□□□□□ -0.31
ACSS2-219ENST00000490464 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.09□□□□□ -0.315e-7■■■□□ 18.6
ACSS2-219ENST00000490464 CWC22Q9HCG8 908 aaKnown RBP13.09□□□□□ -0.31
ACSS2-219ENST00000490464 SEC31BQ9NQW1 1179 aa13.09□□□□□ -0.31
ACSS2-219ENST00000490464 HMG20BQ9P0W2 317 aa13.09□□□□□ -0.31
ACSS2-219ENST00000490464 RBM8AQ9Y5S9 174 aaKnown RBP13.09□□□□□ -0.31
ACSS2-219ENST00000490464 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
ACSS2-219ENST00000490464 BRWD3Q6RI45 1802 aa13.09□□□□□ -0.31
ACSS2-219ENST00000490464 ARAP2Q8WZ64 1704 aa13.08□□□□□ -0.32
ACSS2-219ENST00000490464 NPHP1O15259 732 aa13.08□□□□□ -0.32
ACSS2-219ENST00000490464 PHF14O94880 888 aa13.08□□□□□ -0.32
ACSS2-219ENST00000490464 TRIM37O94972 964 aa13.08□□□□□ -0.32
ACSS2-219ENST00000490464 FGFR2P21802 821 aa13.08□□□□□ -0.32
ACSS2-219ENST00000490464 NECTIN1Q15223 517 aa13.08□□□□□ -0.32
ACSS2-219ENST00000490464 PRPF40BQ6NWY9 871 aaKnown RBP13.08□□□□□ -0.32
ACSS2-219ENST00000490464 CARMIL3Q8ND23 1372 aa13.07□□□□□ -0.32
ACSS2-219ENST00000490464 TAF5LO75529 589 aa13.07□□□□□ -0.32
ACSS2-219ENST00000490464 ARID4AP29374 1257 aaPredicted RBP13.07□□□□□ -0.32
ACSS2-219ENST00000490464 KRT32Q14532 448 aa13.07□□□□□ -0.32
ACSS2-219ENST00000490464 ZMYM1Q5SVZ6 1142 aa13.07□□□□□ -0.32
ACSS2-219ENST00000490464 CREB3L3Q68CJ9 461 aa13.07□□□□□ -0.32
ACSS2-219ENST00000490464 NDUFB9Q9Y6M9 179 aa13.07□□□□□ -0.32
ACSS2-219ENST00000490464 C4AP0C0L4 1744 aa13.07□□□□□ -0.32
ACSS2-219ENST00000490464 RXRBP28702 533 aa13.06□□□□□ -0.32
ACSS2-219ENST00000490464 DDIT3P35638 169 aa13.06□□□□□ -0.32
ACSS2-219ENST00000490464 ZAP70P43403 619 aa13.06□□□□□ -0.32
ACSS2-219ENST00000490464 CCDC102BQ68D86 513 aa13.06□□□□□ -0.32
ACSS2-219ENST00000490464 LRRC4BQ9NT99 713 aa13.06□□□□□ -0.32
ACSS2-219ENST00000490464 BSDC1Q9NW68 430 aaPredicted RBP13.06□□□□□ -0.32
ACSS2-219ENST00000490464 CYP46A1Q9Y6A2 500 aa13.06□□□□□ -0.32
ACSS2-219ENST00000490464 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.05□□□□□ -0.32
ACSS2-219ENST00000490464 SLC27A2O14975 620 aa13.05□□□□□ -0.32
ACSS2-219ENST00000490464 CHRNDQ07001 517 aa13.05□□□□□ -0.32
ACSS2-219ENST00000490464 SMIM5Q71RC9 77 aa13.05□□□□□ -0.32
ACSS2-219ENST00000490464 ZNF589Q86UQ0 364 aaPredicted RBP13.05□□□□□ -0.32
ACSS2-219ENST00000490464 RASEFQ8IZ41 740 aa13.05□□□□□ -0.32
ACSS2-219ENST00000490464 HELBQ8NG08 1087 aaPredicted RBP13.05□□□□□ -0.32
ACSS2-219ENST00000490464 JAKMIP1Q96N16 626 aaKnown RBP13.05□□□□□ -0.32
ACSS2-219ENST00000490464 DSCC1Q9BVC3 393 aa13.05□□□□□ -0.32
ACSS2-219ENST00000490464 UPF3BQ9BZI7 483 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms