RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 ADGRE1Q14246 886 aa7.76□□□□□ -1.17
HMGN1-218ENST00000490032 ATCAYQ86WG3 371 aa7.76□□□□□ -1.17
HMGN1-218ENST00000490032 WFDC8Q8IUA0 241 aa7.76□□□□□ -1.17
HMGN1-218ENST00000490032 NUDT16Q96DE0 195 aaKnown RBP7.76□□□□□ -1.17
HMGN1-218ENST00000490032 USTQ9Y2C2 406 aa7.76□□□□□ -1.17
HMGN1-218ENST00000490032 CARNS1A5YM72 827 aa7.75□□□□□ -1.17
HMGN1-218ENST00000490032 RPLP1P05386 114 aaKnown RBP7.75□□□□□ -1.17
HMGN1-218ENST00000490032 DOC2BQ14184 412 aa7.75□□□□□ -1.17
HMGN1-218ENST00000490032 NOM1Q5C9Z4 860 aaKnown RBP7.75□□□□□ -1.17
HMGN1-218ENST00000490032 COL13A1Q5TAT6 717 aaPredicted RBP7.75□□□□□ -1.17
HMGN1-218ENST00000490032 TTC39BQ5VTQ0 682 aaPredicted RBP7.75□□□□□ -1.17
HMGN1-218ENST00000490032 XKR5Q6UX68 686 aa7.75□□□□□ -1.17
HMGN1-218ENST00000490032 FBXO11Q86XK2 927 aa7.75□□□□□ -1.17
HMGN1-218ENST00000490032 RBSNQ9H1K0 784 aa7.75□□□□□ -1.17
HMGN1-218ENST00000490032 ABI2Q9NYB9 513 aaPredicted RBP7.75□□□□□ -1.17
HMGN1-218ENST00000490032 KIF4AO95239 1232 aa7.74□□□□□ -1.17
HMGN1-218ENST00000490032 MPSTP25325 297 aa7.74□□□□□ -1.17
HMGN1-218ENST00000490032 EIF1AXP47813 144 aaKnown RBP7.74□□□□□ -1.17
HMGN1-218ENST00000490032 NRG1Q02297 640 aaPredicted RBP7.74□□□□□ -1.17
HMGN1-218ENST00000490032 HYAL2Q12891 473 aa7.74□□□□□ -1.17
HMGN1-218ENST00000490032 MBTPS1Q14703 1052 aa7.74□□□□□ -1.17
HMGN1-218ENST00000490032 SHISA2Q6UWI4 295 aa7.74□□□□□ -1.17
HMGN1-218ENST00000490032 ELP3Q9H9T3 547 aa7.74□□□□□ -1.17
HMGN1-218ENST00000490032 PDGFAP04085 211 aa7.73□□□□□ -1.17
HMGN1-218ENST00000490032 MZF1P28698 734 aaPredicted RBP7.73□□□□□ -1.17
HMGN1-218ENST00000490032 ALKBH2Q6NS38 261 aa7.73□□□□□ -1.17
HMGN1-218ENST00000490032 CACTIN-AS1Q8N1I8 211 aa7.73□□□□□ -1.17
HMGN1-218ENST00000490032 EDEM1Q92611 657 aa7.73□□□□□ -1.17
HMGN1-218ENST00000490032 TMEM63CQ9P1W3 806 aa7.73□□□□□ -1.17
HMGN1-218ENST00000490032 MTMR7Q9Y216 660 aa7.73□□□□□ -1.17
HMGN1-218ENST00000490032 DEAF1O75398 565 aaPredicted RBP7.72□□□□□ -1.17
HMGN1-218ENST00000490032 MTMR3Q13615 1198 aa7.72□□□□□ -1.17
HMGN1-218ENST00000490032 GGNBP2Q9H3C7 697 aa7.72□□□□□ -1.17
HMGN1-218ENST00000490032 TPSG1Q9NRR2 321 aa7.72□□□□□ -1.17
HMGN1-218ENST00000490032 CYP2E1P05181 493 aaPredicted RBP7.71□□□□□ -1.18
HMGN1-218ENST00000490032 PCSK2P16519 638 aa7.71□□□□□ -1.18
HMGN1-218ENST00000490032 DNM1Q05193 864 aaKnown RBP7.71□□□□□ -1.18
HMGN1-218ENST00000490032 SF3B2Q13435 895 aaKnown RBP7.71□□□□□ -1.18
HMGN1-218ENST00000490032 RSPO4Q2I0M5 234 aaPredicted RBP7.71□□□□□ -1.18
HMGN1-218ENST00000490032 NKAPLQ5M9Q1 402 aa7.71□□□□□ -1.18
HMGN1-218ENST00000490032 GDF6Q6KF10 455 aaPredicted RBP7.71□□□□□ -1.18
HMGN1-218ENST00000490032 ZNF438Q7Z4V0 828 aa7.71□□□□□ -1.18
HMGN1-218ENST00000490032 TXNRD3Q86VQ6 643 aa7.71□□□□□ -1.18
HMGN1-218ENST00000490032 SRA1Q9HD15 236 aaKnown RBP7.71□□□□□ -1.18
HMGN1-218ENST00000490032 TRIM33Q9UPN9 1127 aa7.71□□□□□ -1.18
HMGN1-218ENST00000490032 DLL1O00548 723 aa7.7□□□□□ -1.18
HMGN1-218ENST00000490032 FAM13AO94988 1023 aa7.7□□□□□ -1.18
HMGN1-218ENST00000490032 FKBP4Q02790 459 aaKnown RBP eCLIP7.7□□□□□ -1.18
HMGN1-218ENST00000490032 IGF2-ASQ6U949 168 aa7.7□□□□□ -1.18
HMGN1-218ENST00000490032 IL22RA1Q8N6P7 574 aa7.7□□□□□ -1.18
HMGN1-218ENST00000490032 CEP120Q8N960 986 aa7.7□□□□□ -1.18
HMGN1-218ENST00000490032 SPACA7Q96KW9 195 aa7.7□□□□□ -1.18
HMGN1-218ENST00000490032 CNTN3Q9P232 1028 aa7.7□□□□□ -1.18
HMGN1-218ENST00000490032 ITGB7P26010 798 aa7.69□□□□□ -1.18
HMGN1-218ENST00000490032 ATP11AP98196 1134 aa7.69□□□□□ -1.18
HMGN1-218ENST00000490032 B4GALNT3Q6L9W6 998 aa7.69□□□□□ -1.18
HMGN1-218ENST00000490032 MAP4K3Q8IVH8 894 aa7.69□□□□□ -1.18
HMGN1-218ENST00000490032 MUC3BQ9H195 1237 aa7.69□□□□□ -1.18
HMGN1-218ENST00000490032 SALL4Q9UJQ4 1053 aa7.69□□□□□ -1.18
HMGN1-218ENST00000490032 SUPT5HO00267 1087 aaKnown RBP7.68□□□□□ -1.18
HMGN1-218ENST00000490032 SMNDC1O75940 238 aaKnown RBP eCLIP7.68□□□□□ -1.18
HMGN1-218ENST00000490032 SETDB1Q15047 1291 aa7.68□□□□□ -1.18
HMGN1-218ENST00000490032 C1orf127Q8N9H9 656 aa7.68□□□□□ -1.18
HMGN1-218ENST00000490032 SSBP4Q9BWG4 385 aaPredicted RBP7.68□□□□□ -1.18
HMGN1-218ENST00000490032 PBX4Q9BYU1 374 aa7.68□□□□□ -1.18
HMGN1-218ENST00000490032 RASSF4Q9H2L5 321 aa7.68□□□□□ -1.18
HMGN1-218ENST00000490032 EGFL7Q9UHF1 273 aa7.68□□□□□ -1.18
HMGN1-218ENST00000490032 USP21Q9UK80 565 aa7.68□□□□□ -1.18
HMGN1-218ENST00000490032 POLIQ9UNA4 740 aa7.68□□□□□ -1.18
HMGN1-218ENST00000490032 A6NHS1 94 aa7.67□□□□□ -1.18
HMGN1-218ENST00000490032 FZD6O60353 706 aa7.67□□□□□ -1.18
HMGN1-218ENST00000490032 C8orf34Q49A92 452 aa7.67□□□□□ -1.18
HMGN1-218ENST00000490032 CEP135Q66GS9 1140 aa7.67□□□□□ -1.18
HMGN1-218ENST00000490032 NCAPG2Q86XI2 1143 aa7.67□□□□□ -1.18
HMGN1-218ENST00000490032 CHRDQ9H2X0 955 aa7.67□□□□□ -1.18
HMGN1-218ENST00000490032 SEMA6BQ9H3T3 888 aa7.67□□□□□ -1.18
HMGN1-218ENST00000490032 PPME1Q9Y570 386 aa7.67□□□□□ -1.18
HMGN1-218ENST00000490032 DYRK3O43781 588 aa7.66□□□□□ -1.18
HMGN1-218ENST00000490032 ABL1P00519 1130 aa7.66□□□□□ -1.18
HMGN1-218ENST00000490032 USP5P45974 858 aa7.66□□□□□ -1.18
HMGN1-218ENST00000490032 ZNF211Q13398 564 aaPredicted RBP7.66□□□□□ -1.18
HMGN1-218ENST00000490032 ADAMTSL4Q6UY14 1074 aa7.66□□□□□ -1.18
HMGN1-218ENST00000490032 TTC16Q8NEE8 873 aa7.66□□□□□ -1.18
HMGN1-218ENST00000490032 DCAF11Q8TEB1 546 aa7.66□□□□□ -1.18
HMGN1-218ENST00000490032 WFDC12Q8WWY7 111 aa7.66□□□□□ -1.18
HMGN1-218ENST00000490032 PMEPA1Q969W9 287 aa7.66□□□□□ -1.18
HMGN1-218ENST00000490032 KANSL3Q9P2N6 904 aa7.66□□□□□ -1.18
HMGN1-218ENST00000490032 TIMELESSQ9UNS1 1208 aa7.66□□□□□ -1.18
HMGN1-218ENST00000490032 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.66□□□□□ -1.18
HMGN1-218ENST00000490032 H2AFB1P0C5Y9 115 aa7.65□□□□□ -1.18
HMGN1-218ENST00000490032 H2AFB2P0C5Z0 115 aa7.65□□□□□ -1.18
HMGN1-218ENST00000490032 CES1P23141 567 aa7.65□□□□□ -1.18
HMGN1-218ENST00000490032 CDC27P30260 824 aa7.65□□□□□ -1.18
HMGN1-218ENST00000490032 EHHADHQ08426 723 aa7.65□□□□□ -1.18
HMGN1-218ENST00000490032 GJD3Q8N144 294 aa7.65□□□□□ -1.18
HMGN1-218ENST00000490032 TMEM130Q8N3G9 435 aa7.65□□□□□ -1.18
HMGN1-218ENST00000490032 ARID3AQ99856 593 aa7.65□□□□□ -1.18
HMGN1-218ENST00000490032 ADAM19Q9H013 955 aa7.65□□□□□ -1.18
HMGN1-218ENST00000490032 NFKBIEO00221 500 aa7.64□□□□□ -1.19
HMGN1-218ENST00000490032 TM4SF5O14894 197 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms