RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 FZD6O60353 706 aa7.78□□□□□ -1.16
ITGB1-214ENST00000488427 GHRHP01286 108 aa7.78□□□□□ -1.16
ITGB1-214ENST00000488427 HOXD8P13378 290 aaPredicted RBP7.78□□□□□ -1.16
ITGB1-214ENST00000488427 CHRNA4P43681 627 aa7.78□□□□□ -1.16
ITGB1-214ENST00000488427 HYAL2Q12891 473 aa7.78□□□□□ -1.16
ITGB1-214ENST00000488427 TRIP4Q15650 581 aaPredicted RBP7.78□□□□□ -1.16
ITGB1-214ENST00000488427 FAM26DQ5JW98 314 aa7.78□□□□□ -1.16
ITGB1-214ENST00000488427 CHSY3Q70JA7 882 aa7.78□□□□□ -1.16
ITGB1-214ENST00000488427 GJD3Q8N144 294 aa7.78□□□□□ -1.16
ITGB1-214ENST00000488427 TRPM4Q8TD43 1214 aa7.78□□□□□ -1.16
ITGB1-214ENST00000488427 DCTN4Q9UJW0 460 aa7.78□□□□□ -1.16
ITGB1-214ENST00000488427 HCN2Q9UL51 889 aa7.78□□□□□ -1.16
ITGB1-214ENST00000488427 SLC6A14Q9UN76 642 aa7.78□□□□□ -1.16
ITGB1-214ENST00000488427 FAM177BA6PVY3 158 aa7.77□□□□□ -1.17
ITGB1-214ENST00000488427 GRNP28799 593 aaKnown RBP7.77□□□□□ -1.17
ITGB1-214ENST00000488427 ARHGAP4P98171 946 aa7.77□□□□□ -1.17
ITGB1-214ENST00000488427 FAM35AQ86V20 835 aa7.77□□□□□ -1.17
ITGB1-214ENST00000488427 MICALL1Q8N3F8 863 aa7.77□□□□□ -1.17
ITGB1-214ENST00000488427 OR13H1Q8NG92 308 aa7.77□□□□□ -1.17
ITGB1-214ENST00000488427 MMP20O60882 483 aa7.76□□□□□ -1.17
ITGB1-214ENST00000488427 PHACTR2O75167 634 aa7.76□□□□□ -1.17
ITGB1-214ENST00000488427 SND1Q7KZF4 910 aaKnown RBP eCLIP7.76□□□□□ -1.179e-11■■■■□ 19.3
ITGB1-214ENST00000488427 CACTIN-AS1Q8N1I8 211 aa7.76□□□□□ -1.17
ITGB1-214ENST00000488427 RBCK1Q9BYM8 510 aa7.76□□□□□ -1.17
ITGB1-214ENST00000488427 FRRS1LQ9P0K9 344 aa7.76□□□□□ -1.17
ITGB1-214ENST00000488427 KLF15Q9UIH9 416 aa7.76□□□□□ -1.17
ITGB1-214ENST00000488427 LILRB5O75023 590 aa7.75□□□□□ -1.17
ITGB1-214ENST00000488427 RGS9O75916 674 aaPredicted RBP7.75□□□□□ -1.17
ITGB1-214ENST00000488427 CES1P23141 567 aa7.75□□□□□ -1.17
ITGB1-214ENST00000488427 MAPK1P28482 360 aa7.75□□□□□ -1.17
ITGB1-214ENST00000488427 ELMSAN1Q6PJG2 1045 aa7.75□□□□□ -1.17
ITGB1-214ENST00000488427 ZFATQ9P243 1243 aa7.75□□□□□ -1.17
ITGB1-214ENST00000488427 EIF2AK2P19525 551 aaKnown RBP7.74□□□□□ -1.17
ITGB1-214ENST00000488427 NCAPG2Q86XI2 1143 aa7.74□□□□□ -1.17
ITGB1-214ENST00000488427 DCAF11Q8TEB1 546 aa7.74□□□□□ -1.17
ITGB1-214ENST00000488427 MDFIQ99750 246 aa7.74□□□□□ -1.17
ITGB1-214ENST00000488427 PRDM6Q9NQX0 595 aa7.74□□□□□ -1.17
ITGB1-214ENST00000488427 CCDC87Q9NVE4 849 aa7.74□□□□□ -1.17
ITGB1-214ENST00000488427 LOC102724428A0A0B4J2F2 783 aa7.73□□□□□ -1.17
ITGB1-214ENST00000488427 SMNDC1O75940 238 aaKnown RBP eCLIP7.73□□□□□ -1.17
ITGB1-214ENST00000488427 EDN3P14138 238 aa7.73□□□□□ -1.17
ITGB1-214ENST00000488427 SIK1P57059 783 aa7.73□□□□□ -1.17
ITGB1-214ENST00000488427 FGD1P98174 961 aa7.73□□□□□ -1.17
ITGB1-214ENST00000488427 DOC2BQ14184 412 aa7.73□□□□□ -1.17
ITGB1-214ENST00000488427 SEMA6BQ9H3T3 888 aa7.73□□□□□ -1.17
ITGB1-214ENST00000488427 TNFRSF21O75509 655 aa7.72□□□□□ -1.17
ITGB1-214ENST00000488427 CPB1P15086 417 aa7.72□□□□□ -1.17
ITGB1-214ENST00000488427 PSAPL1Q6NUJ1 521 aa7.72□□□□□ -1.17
ITGB1-214ENST00000488427 TTC9Q92623 222 aa7.72□□□□□ -1.17
ITGB1-214ENST00000488427 FAM129BQ96TA1 746 aa7.72□□□□□ -1.17
ITGB1-214ENST00000488427 KRTAP4-8Q9BYQ9 185 aa7.72□□□□□ -1.17
ITGB1-214ENST00000488427 DNAJC25Q9H1X3 360 aa7.72□□□□□ -1.17
ITGB1-214ENST00000488427 GGNBP2Q9H3C7 697 aa7.72□□□□□ -1.17
ITGB1-214ENST00000488427 JPH1Q9HDC5 661 aaPredicted RBP7.72□□□□□ -1.17
ITGB1-214ENST00000488427 AMOTL2Q9Y2J4 779 aa7.72□□□□□ -1.17
ITGB1-214ENST00000488427 M0R082 166 aa7.71□□□□□ -1.18
ITGB1-214ENST00000488427 SPATA31C1P0DKV0 1188 aa7.71□□□□□ -1.18
ITGB1-214ENST00000488427 GATA4P43694 442 aa7.71□□□□□ -1.18
ITGB1-214ENST00000488427 ZNF417Q8TAU3 575 aa7.71□□□□□ -1.18
ITGB1-214ENST00000488427 ALKBH8Q96BT7 664 aaKnown RBP7.71□□□□□ -1.18
ITGB1-214ENST00000488427 NSUN5Q96P11 429 aaKnown RBP7.71□□□□□ -1.18
ITGB1-214ENST00000488427 ZNF587Q96SQ5 575 aaPredicted RBP7.71□□□□□ -1.18
ITGB1-214ENST00000488427 PLVAPQ9BX97 442 aa7.71□□□□□ -1.18
ITGB1-214ENST00000488427 TMEM63CQ9P1W3 806 aa7.71□□□□□ -1.18
ITGB1-214ENST00000488427 MLLT1Q03111 559 aaPredicted RBP7.7□□□□□ -1.18
ITGB1-214ENST00000488427 ECM1Q16610 540 aa7.7□□□□□ -1.18
ITGB1-214ENST00000488427 TRIM11Q96F44 468 aa7.7□□□□□ -1.18
ITGB1-214ENST00000488427 MUC3BQ9H195 1237 aa7.7□□□□□ -1.18
ITGB1-214ENST00000488427 CPNE3O75131 537 aaKnown RBP7.69□□□□□ -1.18
ITGB1-214ENST00000488427 KIF4AO95239 1232 aa7.69□□□□□ -1.18
ITGB1-214ENST00000488427 ERCC3P19447 782 aa7.69□□□□□ -1.18
ITGB1-214ENST00000488427 ITGB7P26010 798 aa7.69□□□□□ -1.18
ITGB1-214ENST00000488427 PRRT3Q5FWE3 981 aa7.69□□□□□ -1.18
ITGB1-214ENST00000488427 ZMYM1Q5SVZ6 1142 aa7.69□□□□□ -1.18
ITGB1-214ENST00000488427 PLD4Q96BZ4 506 aa7.69□□□□□ -1.18
ITGB1-214ENST00000488427 ASB16Q96NS5 453 aa7.69□□□□□ -1.18
ITGB1-214ENST00000488427 PSMG3-AS1Q96PY0 264 aa7.69□□□□□ -1.18
ITGB1-214ENST00000488427 EIF4EBP3O60516 100 aaPredicted RBP7.68□□□□□ -1.18
ITGB1-214ENST00000488427 ALBP02768 609 aa7.68□□□□□ -1.18
ITGB1-214ENST00000488427 RAC1P63000 192 aa7.68□□□□□ -1.18
ITGB1-214ENST00000488427 ATP2B2Q01814 1243 aa7.68□□□□□ -1.18
ITGB1-214ENST00000488427 PERM1Q5SV97 790 aa7.68□□□□□ -1.18
ITGB1-214ENST00000488427 SMG9Q9H0W8 520 aaKnown RBP7.68□□□□□ -1.18
ITGB1-214ENST00000488427 BCL11AQ9H165 835 aa7.68□□□□□ -1.18
ITGB1-214ENST00000488427 SRA1Q9HD15 236 aaKnown RBP7.68□□□□□ -1.18
ITGB1-214ENST00000488427 ITGAEP38570 1179 aa7.67□□□□□ -1.18
ITGB1-214ENST00000488427 PLCB3Q01970 1234 aa7.67□□□□□ -1.18
ITGB1-214ENST00000488427 CCDC27Q2M243 656 aa7.67□□□□□ -1.18
ITGB1-214ENST00000488427 WFDC8Q8IUA0 241 aa7.67□□□□□ -1.18
ITGB1-214ENST00000488427 C1orf127Q8N9H9 656 aa7.67□□□□□ -1.18
ITGB1-214ENST00000488427 NUDT8Q8WV74 236 aa7.67□□□□□ -1.18
ITGB1-214ENST00000488427 GZF1Q9H116 711 aaPredicted RBP7.67□□□□□ -1.18
ITGB1-214ENST00000488427 ZFYVE28Q9HCC9 887 aa7.67□□□□□ -1.18
ITGB1-214ENST00000488427 A6NHS1 94 aa7.66□□□□□ -1.18
ITGB1-214ENST00000488427 ZBTB42B2RXF5 422 aa7.66□□□□□ -1.18
ITGB1-214ENST00000488427 PTPRAP18433 802 aa7.66□□□□□ -1.18
ITGB1-214ENST00000488427 C20orf204Q6ZNR8 217 aa7.66□□□□□ -1.18
ITGB1-214ENST00000488427 HFE2Q6ZVN8 426 aa7.66□□□□□ -1.18
ITGB1-214ENST00000488427 TMC7Q7Z402 723 aa7.66□□□□□ -1.18
ITGB1-214ENST00000488427 MAP4K3Q8IVH8 894 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms