RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 C8orf86Q6ZUL3 223 aa5.81□□□□□ -1.48
RBM28-207ENST00000488249 C1orf127Q8N9H9 656 aa5.81□□□□□ -1.48
RBM28-207ENST00000488249 NUDT8Q8WV74 236 aa5.81□□□□□ -1.48
RBM28-207ENST00000488249 LPIN3Q9BQK8 851 aa5.81□□□□□ -1.48
RBM28-207ENST00000488249 PRDM6Q9NQX0 595 aa5.81□□□□□ -1.48
RBM28-207ENST00000488249 FRRS1LQ9P0K9 344 aa5.81□□□□□ -1.48
RBM28-207ENST00000488249 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
RBM28-207ENST00000488249 PIK3R2O00459 728 aa5.8□□□□□ -1.48
RBM28-207ENST00000488249 GNB5O14775 395 aa5.8□□□□□ -1.48
RBM28-207ENST00000488249 LILRB5O75023 590 aa5.8□□□□□ -1.48
RBM28-207ENST00000488249 TNFRSF21O75509 655 aa5.8□□□□□ -1.48
RBM28-207ENST00000488249 GHRHP01286 108 aa5.8□□□□□ -1.48
RBM28-207ENST00000488249 EIF2AK2P19525 551 aaKnown RBP5.8□□□□□ -1.48
RBM28-207ENST00000488249 CES1P23141 567 aa5.8□□□□□ -1.48
RBM28-207ENST00000488249 HYAL2Q12891 473 aa5.8□□□□□ -1.48
RBM28-207ENST00000488249 PDE3BQ13370 1112 aa5.8□□□□□ -1.48
RBM28-207ENST00000488249 COL13A1Q5TAT6 717 aaPredicted RBP5.8□□□□□ -1.48
RBM28-207ENST00000488249 HOMEZQ8IX15 550 aa5.8□□□□□ -1.48
RBM28-207ENST00000488249 SNX29Q8TEQ0 813 aa5.8□□□□□ -1.48
RBM28-207ENST00000488249 PMEPA1Q969W9 287 aa5.8□□□□□ -1.48
RBM28-207ENST00000488249 FAM129BQ96TA1 746 aa5.8□□□□□ -1.48
RBM28-207ENST00000488249 KRTAP4-6Q9BYQ5 205 aa5.8□□□□□ -1.48
RBM28-207ENST00000488249 JPH1Q9HDC5 661 aaPredicted RBP5.8□□□□□ -1.48
RBM28-207ENST00000488249 FOXD3Q9UJU5 478 aaPredicted RBP5.8□□□□□ -1.48
RBM28-207ENST00000488249 DCTN4Q9UJW0 460 aa5.8□□□□□ -1.48
RBM28-207ENST00000488249 PHACTR2O75167 634 aa5.79□□□□□ -1.48
RBM28-207ENST00000488249 KIF4AO95239 1232 aa5.79□□□□□ -1.48
RBM28-207ENST00000488249 IRS1P35568 1242 aa5.79□□□□□ -1.48
RBM28-207ENST00000488249 KCNMA1Q12791 1236 aa5.79□□□□□ -1.48
RBM28-207ENST00000488249 COL9A3Q14050 684 aaPredicted RBP5.79□□□□□ -1.48
RBM28-207ENST00000488249 TMC1Q8TDI8 760 aa5.79□□□□□ -1.48
RBM28-207ENST00000488249 TTC9Q92623 222 aa5.79□□□□□ -1.48
RBM28-207ENST00000488249 TRIM11Q96F44 468 aa5.79□□□□□ -1.48
RBM28-207ENST00000488249 SPACA7Q96KW9 195 aa5.79□□□□□ -1.48
RBM28-207ENST00000488249 RBCK1Q9BYM8 510 aa5.79□□□□□ -1.48
RBM28-207ENST00000488249 SMG9Q9H0W8 520 aaKnown RBP5.79□□□□□ -1.48
RBM28-207ENST00000488249 RBSNQ9H1K0 784 aa5.79□□□□□ -1.48
RBM28-207ENST00000488249 CHRDQ9H2X0 955 aa5.79□□□□□ -1.48
RBM28-207ENST00000488249 KANSL3Q9P2N6 904 aa5.79□□□□□ -1.48
RBM28-207ENST00000488249 IGHA2P01877 340 aa5.78□□□□□ -1.48
RBM28-207ENST00000488249 NID1P14543 1247 aa5.78□□□□□ -1.48
RBM28-207ENST00000488249 AFF1P51825 1210 aaKnown RBP5.78□□□□□ -1.48
RBM28-207ENST00000488249 NCAPG2Q86XI2 1143 aa5.78□□□□□ -1.48
RBM28-207ENST00000488249 PLD4Q96BZ4 506 aa5.78□□□□□ -1.48
RBM28-207ENST00000488249 SUV39H2Q9H5I1 410 aa5.78□□□□□ -1.48
RBM28-207ENST00000488249 SALL4Q9UJQ4 1053 aa5.78□□□□□ -1.48
RBM28-207ENST00000488249 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.78□□□□□ -1.48
RBM28-207ENST00000488249 EREGO14944 169 aa5.77□□□□□ -1.49
RBM28-207ENST00000488249 NEFLP07196 543 aa5.77□□□□□ -1.49
RBM28-207ENST00000488249 MAPK1P28482 360 aa5.77□□□□□ -1.49
RBM28-207ENST00000488249 GSK3AP49840 483 aa5.77□□□□□ -1.49
RBM28-207ENST00000488249 GRIK5Q16478 980 aa5.77□□□□□ -1.49
RBM28-207ENST00000488249 CEP120Q8N960 986 aa5.77□□□□□ -1.49
RBM28-207ENST00000488249 DMRTB1Q96MA1 342 aa5.77□□□□□ -1.49
RBM28-207ENST00000488249 PLVAPQ9BX97 442 aa5.77□□□□□ -1.49
RBM28-207ENST00000488249 ZFYVE28Q9HCC9 887 aa5.77□□□□□ -1.49
RBM28-207ENST00000488249 NOP53Q9NZM5 478 aaKnown RBP5.77□□□□□ -1.49
RBM28-207ENST00000488249 GPR182O15218 404 aa5.76□□□□□ -1.49
RBM28-207ENST00000488249 COL8A1P27658 744 aa5.76□□□□□ -1.49
RBM28-207ENST00000488249 ATP11AP98196 1134 aa5.76□□□□□ -1.49
RBM28-207ENST00000488249 RASSF7Q02833 373 aa5.76□□□□□ -1.49
RBM28-207ENST00000488249 SND1Q7KZF4 910 aaKnown RBP eCLIP5.76□□□□□ -1.49
RBM28-207ENST00000488249 TMC7Q7Z402 723 aa5.76□□□□□ -1.49
RBM28-207ENST00000488249 NIF3L1Q9GZT8 377 aa5.76□□□□□ -1.49
RBM28-207ENST00000488249 AMOTL2Q9Y2J4 779 aa5.76□□□□□ -1.49
RBM28-207ENST00000488249 SPDYE3A6NKU9 549 aa5.75□□□□□ -1.49
RBM28-207ENST00000488249 SMNDC1O75940 238 aaKnown RBP eCLIP5.75□□□□□ -1.49
RBM28-207ENST00000488249 EDN3P14138 238 aa5.75□□□□□ -1.49
RBM28-207ENST00000488249 ORC1Q13415 861 aa5.75□□□□□ -1.49
RBM28-207ENST00000488249 CEP135Q66GS9 1140 aa5.75□□□□□ -1.49
RBM28-207ENST00000488249 MSL1Q68DK7 614 aa5.75□□□□□ -1.49
RBM28-207ENST00000488249 ALKBH8Q96BT7 664 aaKnown RBP5.75□□□□□ -1.49
RBM28-207ENST00000488249 PBX4Q9BYU1 374 aa5.75□□□□□ -1.49
RBM28-207ENST00000488249 RASSF4Q9H2L5 321 aa5.75□□□□□ -1.49
RBM28-207ENST00000488249 CPNE3O75131 537 aaKnown RBP5.74□□□□□ -1.49
RBM28-207ENST00000488249 POLR3DP05423 398 aaPredicted RBP5.74□□□□□ -1.49
RBM28-207ENST00000488249 ACPPP15309 386 aa5.74□□□□□ -1.49
RBM28-207ENST00000488249 TRAPPC3LQ5T215 181 aa5.74□□□□□ -1.49
RBM28-207ENST00000488249 GDF6Q6KF10 455 aaPredicted RBP5.74□□□□□ -1.49
RBM28-207ENST00000488249 ILDR2Q71H61 639 aa5.74□□□□□ -1.49
RBM28-207ENST00000488249 ALYREFQ86V81 257 aaKnown RBP5.74□□□□□ -1.49
RBM28-207ENST00000488249 WFDC8Q8IUA0 241 aa5.74□□□□□ -1.49
RBM28-207ENST00000488249 ZSCAN29Q8IWY8 852 aaPredicted RBP5.74□□□□□ -1.49
RBM28-207ENST00000488249 DMRTC2Q8IXT2 367 aaPredicted RBP5.74□□□□□ -1.49
RBM28-207ENST00000488249 CACTIN-AS1Q8N1I8 211 aa5.74□□□□□ -1.49
RBM28-207ENST00000488249 DZANK1Q9NVP4 752 aa5.74□□□□□ -1.49
RBM28-207ENST00000488249 TRIM33Q9UPN9 1127 aa5.74□□□□□ -1.49
RBM28-207ENST00000488249 NFKBIEO00221 500 aa5.73□□□□□ -1.49
RBM28-207ENST00000488249 GDF11O95390 407 aa5.73□□□□□ -1.49
RBM28-207ENST00000488249 TRIM28Q13263 835 aaKnown RBP5.73□□□□□ -1.49
RBM28-207ENST00000488249 USPL1Q5W0Q7 1092 aa5.73□□□□□ -1.49
RBM28-207ENST00000488249 TMEM151AQ8N4L1 468 aa5.73□□□□□ -1.49
RBM28-207ENST00000488249 DCAF5Q96JK2 942 aa5.73□□□□□ -1.49
RBM28-207ENST00000488249 ASB16Q96NS5 453 aa5.73□□□□□ -1.49
RBM28-207ENST00000488249 OSMRQ99650 979 aa5.73□□□□□ -1.49
RBM28-207ENST00000488249 GZF1Q9H116 711 aaPredicted RBP5.73□□□□□ -1.49
RBM28-207ENST00000488249 DNAJC25Q9H1X3 360 aa5.73□□□□□ -1.49
RBM28-207ENST00000488249 A0A0A0MRY4 1105 aa5.72□□□□□ -1.49
RBM28-207ENST00000488249 EIF1AYO14602 144 aaKnown RBP5.72□□□□□ -1.49
RBM28-207ENST00000488249 TREHO43280 583 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms