RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 CDH23Q9H251 3354 aa9.29□□□□□ -0.92
CHD6-209ENST00000482596 SLC9C1Q4G0N8 1177 aa9.28□□□□□ -0.92
CHD6-209ENST00000482596 HDGFL2Q7Z4V5 671 aaPredicted RBP9.28□□□□□ -0.92
CHD6-209ENST00000482596 UBE2Q1Q7Z7E8 422 aa9.28□□□□□ -0.92
CHD6-209ENST00000482596 TMC1Q8TDI8 760 aa9.28□□□□□ -0.92
CHD6-209ENST00000482596 EFCC1Q9HA90 598 aa9.28□□□□□ -0.92
CHD6-209ENST00000482596 CNOT7Q9UIV1 285 aaKnown RBP9.28□□□□□ -0.92
CHD6-209ENST00000482596 PTCH2Q9Y6C5 1203 aa9.28□□□□□ -0.92
CHD6-209ENST00000482596 NCOR1O75376 2440 aa9.27□□□□□ -0.92
CHD6-209ENST00000482596 CANXP27824 592 aaKnown RBP9.27□□□□□ -0.93
CHD6-209ENST00000482596 AOC3Q16853 763 aa9.27□□□□□ -0.93
CHD6-209ENST00000482596 TBC1D10BQ4KMP7 808 aaPredicted RBP9.27□□□□□ -0.93
CHD6-209ENST00000482596 MAFAQ8NHW3 353 aaPredicted RBP9.27□□□□□ -0.93
CHD6-209ENST00000482596 CDCA5Q96FF9 252 aa9.27□□□□□ -0.93
CHD6-209ENST00000482596 GDF15Q99988 308 aa9.27□□□□□ -0.93
CHD6-209ENST00000482596 HTATIP2Q9BUP3 242 aa9.27□□□□□ -0.93
CHD6-209ENST00000482596 BCL2L13Q9BXK5 485 aa9.27□□□□□ -0.93
CHD6-209ENST00000482596 CACNA1GO43497 2377 aa9.27□□□□□ -0.93
CHD6-209ENST00000482596 KLRG2A4D1S0 409 aaPredicted RBP9.26□□□□□ -0.93
CHD6-209ENST00000482596 UBE2Q2LH0YL09 131 aa9.26□□□□□ -0.93
CHD6-209ENST00000482596 NFATC2IPQ8NCF5 419 aa9.26□□□□□ -0.93
CHD6-209ENST00000482596 SH3TC2Q8TF17 1288 aa9.26□□□□□ -0.93
CHD6-209ENST00000482596 ERO1AQ96HE7 468 aa9.26□□□□□ -0.93
CHD6-209ENST00000482596 ARIH1Q9Y4X5 557 aaPredicted RBP9.26□□□□□ -0.93
CHD6-209ENST00000482596 CDHR2Q9BYE9 1310 aa9.26□□□□□ -0.93
CHD6-209ENST00000482596 PPIP5K2O43314 1243 aa9.25□□□□□ -0.93
CHD6-209ENST00000482596 RAD17O75943 681 aa9.25□□□□□ -0.93
CHD6-209ENST00000482596 BMP8BP34820 402 aa9.25□□□□□ -0.93
CHD6-209ENST00000482596 DOK7Q18PE1 504 aa9.25□□□□□ -0.93
CHD6-209ENST00000482596 TJAP1Q5JTD0 557 aa9.25□□□□□ -0.93
CHD6-209ENST00000482596 NBPF11Q86T75 865 aa9.25□□□□□ -0.93
CHD6-209ENST00000482596 DCPSQ96C86 337 aaKnown RBP9.25□□□□□ -0.93
CHD6-209ENST00000482596 SETDB2Q96T68 719 aa9.25□□□□□ -0.93
CHD6-209ENST00000482596 TBC1D2BQ9UPU7 963 aa9.25□□□□□ -0.93
CHD6-209ENST00000482596 ZSWIM8A7E2V4 1837 aa9.25□□□□□ -0.93
CHD6-209ENST00000482596 ASTN2O75129 1339 aaPredicted RBP9.25□□□□□ -0.93
CHD6-209ENST00000482596 H7C1D1 291 aa9.24□□□□□ -0.93
CHD6-209ENST00000482596 GTPBP6O43824 516 aaPredicted RBP9.24□□□□□ -0.93
CHD6-209ENST00000482596 HOXB3P14651 431 aaPredicted RBP9.24□□□□□ -0.93
CHD6-209ENST00000482596 SREBF2Q12772 1141 aa9.24□□□□□ -0.93
CHD6-209ENST00000482596 MTFR1Q15390 333 aa9.24□□□□□ -0.93
CHD6-209ENST00000482596 ZNF710Q8N1W2 664 aa9.24□□□□□ -0.93
CHD6-209ENST00000482596 P2RX7Q99572 595 aaKnown RBP9.24□□□□□ -0.93
CHD6-209ENST00000482596 ZNF646O15015 1829 aaPredicted RBP9.24□□□□□ -0.93
CHD6-209ENST00000482596 FLT4P35916 1363 aa9.24□□□□□ -0.93
CHD6-209ENST00000482596 C2orf72A6NCS6 295 aa9.23□□□□□ -0.93
CHD6-209ENST00000482596 EVI5O60447 810 aa9.23□□□□□ -0.93
CHD6-209ENST00000482596 EIF5P55010 431 aaKnown RBP9.23□□□□□ -0.93
CHD6-209ENST00000482596 RBM26Q5T8P6 1007 aaKnown RBP9.23□□□□□ -0.93
CHD6-209ENST00000482596 TMC2Q8TDI7 906 aa9.23□□□□□ -0.93
CHD6-209ENST00000482596 ZNRF3Q9ULT6 936 aa9.23□□□□□ -0.93
CHD6-209ENST00000482596 HCN4Q9Y3Q4 1203 aa9.23□□□□□ -0.93
CHD6-209ENST00000482596 TCERG1O14776 1098 aaKnown RBP9.22□□□□□ -0.93
CHD6-209ENST00000482596 ALDH1B1P30837 517 aa9.22□□□□□ -0.93
CHD6-209ENST00000482596 TDHQ8IZJ6 230 aa9.22□□□□□ -0.93
CHD6-209ENST00000482596 EYA1Q99502 592 aa9.22□□□□□ -0.93
CHD6-209ENST00000482596 CDX2Q99626 313 aaPredicted RBP9.22□□□□□ -0.93
CHD6-209ENST00000482596 PLSCR2Q9NRY7 297 aa9.22□□□□□ -0.93
CHD6-209ENST00000482596 GGA3Q9NZ52 723 aa9.22□□□□□ -0.93
CHD6-209ENST00000482596 PRAMEF22A3QJZ6 481 aa9.21□□□□□ -0.94
CHD6-209ENST00000482596 RIMBP2O15034 1052 aa9.21□□□□□ -0.94
CHD6-209ENST00000482596 MRE11P49959 708 aa9.21□□□□□ -0.94
CHD6-209ENST00000482596 SULF1Q8IWU6 871 aa9.21□□□□□ -0.94
CHD6-209ENST00000482596 BBXQ8WY36 941 aaPredicted RBP9.21□□□□□ -0.94
CHD6-209ENST00000482596 PKD1L2Q7Z442 2459 aa9.2□□□□□ -0.94
CHD6-209ENST00000482596 TAF1P21675 1872 aa9.2□□□□□ -0.94
CHD6-209ENST00000482596 IGF2BP3O00425 579 aaKnown RBP eCLIP9.2□□□□□ -0.94
CHD6-209ENST00000482596 ALDH1A1P00352 501 aa9.2□□□□□ -0.94
CHD6-209ENST00000482596 FKBP1BP68106 108 aa9.2□□□□□ -0.94
CHD6-209ENST00000482596 FAM109BQ6ICB4 259 aaPredicted RBP9.2□□□□□ -0.94
CHD6-209ENST00000482596 NBPF5PQ86XG9 351 aaPredicted RBP9.2□□□□□ -0.94
CHD6-209ENST00000482596 MARVELD3Q96A59 401 aa9.2□□□□□ -0.94
CHD6-209ENST00000482596 TERF2IPQ9NYB0 399 aa9.2□□□□□ -0.94
CHD6-209ENST00000482596 ZMYND8Q9ULU4 1186 aaPredicted RBP9.2□□□□□ -0.94
CHD6-209ENST00000482596 SCAF8Q9UPN6 1271 aaKnown RBP9.2□□□□□ -0.94
CHD6-209ENST00000482596 ZNF330Q9Y3S2 320 aaPredicted RBP9.2□□□□□ -0.94
CHD6-209ENST00000482596 EMILIN1Q9Y6C2 1016 aa9.2□□□□□ -0.94
CHD6-209ENST00000482596 YDJCA8MPS7 323 aa9.19□□□□□ -0.94
CHD6-209ENST00000482596 CAMTA2O94983 1202 aa9.19□□□□□ -0.94
CHD6-209ENST00000482596 HSP90AB1P08238 724 aaKnown RBP9.19□□□□□ -0.94
CHD6-209ENST00000482596 SP3Q02447 781 aa9.19□□□□□ -0.94
CHD6-209ENST00000482596 CRHR2Q13324 411 aa9.19□□□□□ -0.94
CHD6-209ENST00000482596 SLC39A6Q13433 755 aa9.19□□□□□ -0.94
CHD6-209ENST00000482596 CC2D2BQ6DHV5 1058 aa9.19□□□□□ -0.94
CHD6-209ENST00000482596 MYLIPQ8WY64 445 aa9.19□□□□□ -0.94
CHD6-209ENST00000482596 LRFN3Q9BTN0 628 aa9.19□□□□□ -0.94
CHD6-209ENST00000482596 GGNBP2Q9H3C7 697 aa9.19□□□□□ -0.94
CHD6-209ENST00000482596 A0A087WZG4 1122 aa9.18□□□□□ -0.94
CHD6-209ENST00000482596 FARP2O94887 1054 aaPredicted RBP9.18□□□□□ -0.94
CHD6-209ENST00000482596 PRKCSHP14314 528 aaPredicted RBP9.18□□□□□ -0.94
CHD6-209ENST00000482596 MAGEA10P43363 369 aaPredicted RBP9.18□□□□□ -0.94
CHD6-209ENST00000482596 TNIP1Q15025 636 aa9.18□□□□□ -0.94
CHD6-209ENST00000482596 PRAMEF18Q5VWM3 479 aa9.18□□□□□ -0.94
CHD6-209ENST00000482596 NUTM1Q86Y26 1132 aa9.18□□□□□ -0.94
CHD6-209ENST00000482596 BAHCC1Q9P281 2608 aa9.18□□□□□ -0.94
CHD6-209ENST00000482596 LAMB1P07942 1786 aa9.17□□□□□ -0.94
CHD6-209ENST00000482596 ST20-MTHFSA0A0A6YYL1 179 aa9.17□□□□□ -0.94
CHD6-209ENST00000482596 FAM177BA6PVY3 158 aa9.17□□□□□ -0.94
CHD6-209ENST00000482596 SYN1P17600 705 aa9.17□□□□□ -0.94
CHD6-209ENST00000482596 GJA8P48165 433 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 697.9 ms