RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 SF3B2Q13435 895 aaKnown RBP7.07□□□□□ -1.28
TM9SF3-203ENST00000464654 NOM1Q5C9Z4 860 aaKnown RBP7.07□□□□□ -1.28
TM9SF3-203ENST00000464654 XKR5Q6UX68 686 aa7.07□□□□□ -1.28
TM9SF3-203ENST00000464654 SMG9Q9H0W8 520 aaKnown RBP7.07□□□□□ -1.28
TM9SF3-203ENST00000464654 C9orf172C9J069 976 aa7.06□□□□□ -1.28
TM9SF3-203ENST00000464654 FAM13AO94988 1023 aa7.06□□□□□ -1.28
TM9SF3-203ENST00000464654 GHRHP01286 108 aa7.06□□□□□ -1.28
TM9SF3-203ENST00000464654 MZF1P28698 734 aaPredicted RBP7.06□□□□□ -1.28
TM9SF3-203ENST00000464654 GATA4P43694 442 aa7.06□□□□□ -1.28
TM9SF3-203ENST00000464654 PDE4CQ08493 712 aa7.06□□□□□ -1.28
TM9SF3-203ENST00000464654 TTC39BQ5VTQ0 682 aaPredicted RBP7.06□□□□□ -1.28
TM9SF3-203ENST00000464654 WFDC8Q8IUA0 241 aa7.06□□□□□ -1.28
TM9SF3-203ENST00000464654 FMR1NBQ8N0W7 255 aaPredicted RBP7.06□□□□□ -1.28
TM9SF3-203ENST00000464654 PLD4Q96BZ4 506 aa7.06□□□□□ -1.28
TM9SF3-203ENST00000464654 NUDT16Q96DE0 195 aaKnown RBP7.06□□□□□ -1.28
TM9SF3-203ENST00000464654 ABI2Q9NYB9 513 aaPredicted RBP7.06□□□□□ -1.28
TM9SF3-203ENST00000464654 FAM229AH3BQW9 127 aa7.05□□□□□ -1.28
TM9SF3-203ENST00000464654 KIF4AO95239 1232 aa7.05□□□□□ -1.28
TM9SF3-203ENST00000464654 EIF1AXP47813 144 aaKnown RBP7.05□□□□□ -1.28
TM9SF3-203ENST00000464654 NRG1Q02297 640 aaPredicted RBP7.05□□□□□ -1.28
TM9SF3-203ENST00000464654 HYAL2Q12891 473 aa7.05□□□□□ -1.28
TM9SF3-203ENST00000464654 HFE2Q6ZVN8 426 aa7.05□□□□□ -1.28
TM9SF3-203ENST00000464654 DMRTC2Q8IXT2 367 aaPredicted RBP7.05□□□□□ -1.28
TM9SF3-203ENST00000464654 LENG1Q96BZ8 264 aaPredicted RBP7.05□□□□□ -1.28
TM9SF3-203ENST00000464654 NSUN5Q96P11 429 aaKnown RBP7.05□□□□□ -1.28
TM9SF3-203ENST00000464654 ELP3Q9H9T3 547 aa7.05□□□□□ -1.28
TM9SF3-203ENST00000464654 SRA1Q9HD15 236 aaKnown RBP7.05□□□□□ -1.28
TM9SF3-203ENST00000464654 J3QW42 95 aa7.04□□□□□ -1.28
TM9SF3-203ENST00000464654 PDGFAP04085 211 aa7.04□□□□□ -1.28
TM9SF3-203ENST00000464654 MPSTP25325 297 aa7.04□□□□□ -1.28
TM9SF3-203ENST00000464654 SCNN1AP37088 669 aa7.04□□□□□ -1.28
TM9SF3-203ENST00000464654 FKBP4Q02790 459 aaKnown RBP eCLIP7.04□□□□□ -1.28
TM9SF3-203ENST00000464654 ATCAYQ86WG3 371 aa7.04□□□□□ -1.28
TM9SF3-203ENST00000464654 FBXO11Q86XK2 927 aa7.04□□□□□ -1.28
TM9SF3-203ENST00000464654 DCAF11Q8TEB1 546 aa7.04□□□□□ -1.28
TM9SF3-203ENST00000464654 EGFL7Q9UHF1 273 aa7.04□□□□□ -1.28
TM9SF3-203ENST00000464654 SELPP16109 830 aa7.03□□□□□ -1.28
TM9SF3-203ENST00000464654 USP5P45974 858 aa7.03□□□□□ -1.28
TM9SF3-203ENST00000464654 GRIK4Q16099 956 aa7.03□□□□□ -1.28
TM9SF3-203ENST00000464654 ZNF438Q7Z4V0 828 aa7.03□□□□□ -1.28
TM9SF3-203ENST00000464654 MAP4K3Q8IVH8 894 aa7.03□□□□□ -1.28
TM9SF3-203ENST00000464654 EDEM1Q92611 657 aa7.03□□□□□ -1.28
TM9SF3-203ENST00000464654 SPACA7Q96KW9 195 aa7.03□□□□□ -1.28
TM9SF3-203ENST00000464654 MUC3BQ9H195 1237 aa7.03□□□□□ -1.28
TM9SF3-203ENST00000464654 BTBD11A6QL63 1104 aa7.02□□□□□ -1.29
TM9SF3-203ENST00000464654 SUPT5HO00267 1087 aaKnown RBP7.02□□□□□ -1.29
TM9SF3-203ENST00000464654 DNM1Q05193 864 aaKnown RBP7.02□□□□□ -1.29
TM9SF3-203ENST00000464654 ADGRE1Q14246 886 aa7.02□□□□□ -1.29
TM9SF3-203ENST00000464654 TTC16Q8NEE8 873 aa7.02□□□□□ -1.29
TM9SF3-203ENST00000464654 TIMELESSQ9UNS1 1208 aa7.02□□□□□ -1.29
TM9SF3-203ENST00000464654 CARNS1A5YM72 827 aa7.01□□□□□ -1.29
TM9SF3-203ENST00000464654 K7ELQ4 463 aaPredicted RBP7.01□□□□□ -1.29
TM9SF3-203ENST00000464654 EHHADHQ08426 723 aa7.01□□□□□ -1.29
TM9SF3-203ENST00000464654 MBTPS1Q14703 1052 aa7.01□□□□□ -1.29
TM9SF3-203ENST00000464654 COL13A1Q5TAT6 717 aaPredicted RBP7.01□□□□□ -1.29
TM9SF3-203ENST00000464654 IGF2-ASQ6U949 168 aa7.01□□□□□ -1.29
TM9SF3-203ENST00000464654 CEP120Q8N960 986 aa7.01□□□□□ -1.29
TM9SF3-203ENST00000464654 PMEPA1Q969W9 287 aa7.01□□□□□ -1.29
TM9SF3-203ENST00000464654 TMEM63CQ9P1W3 806 aa7.01□□□□□ -1.29
TM9SF3-203ENST00000464654 SMNDC1O75940 238 aaKnown RBP eCLIP7□□□□□ -1.29
TM9SF3-203ENST00000464654 MTMR3Q13615 1198 aa7□□□□□ -1.29
TM9SF3-203ENST00000464654 IL22RA1Q8N6P7 574 aa7□□□□□ -1.29
TM9SF3-203ENST00000464654 GGNBP2Q9H3C7 697 aa7□□□□□ -1.29
TM9SF3-203ENST00000464654 ICMTO60725 284 aa6.99□□□□□ -1.29
TM9SF3-203ENST00000464654 DEAF1O75398 565 aaPredicted RBP6.99□□□□□ -1.29
TM9SF3-203ENST00000464654 GDF6Q6KF10 455 aaPredicted RBP6.99□□□□□ -1.29
TM9SF3-203ENST00000464654 TXNRD3Q86VQ6 643 aa6.99□□□□□ -1.29
TM9SF3-203ENST00000464654 PBX4Q9BYU1 374 aa6.99□□□□□ -1.29
TM9SF3-203ENST00000464654 CNTN3Q9P232 1028 aa6.99□□□□□ -1.29
TM9SF3-203ENST00000464654 SALL4Q9UJQ4 1053 aa6.99□□□□□ -1.29
TM9SF3-203ENST00000464654 POLIQ9UNA4 740 aa6.99□□□□□ -1.29
TM9SF3-203ENST00000464654 DLL1O00548 723 aa6.98□□□□□ -1.29
TM9SF3-203ENST00000464654 FZD6O60353 706 aa6.98□□□□□ -1.29
TM9SF3-203ENST00000464654 CYP2E1P05181 493 aaPredicted RBP6.98□□□□□ -1.29
TM9SF3-203ENST00000464654 FURINP09958 794 aa6.98□□□□□ -1.29
TM9SF3-203ENST00000464654 C8orf34Q49A92 452 aa6.98□□□□□ -1.29
TM9SF3-203ENST00000464654 SHISA2Q6UWI4 295 aa6.98□□□□□ -1.29
TM9SF3-203ENST00000464654 NCAPG2Q86XI2 1143 aa6.98□□□□□ -1.29
TM9SF3-203ENST00000464654 RETREG2Q8NC44 543 aa6.98□□□□□ -1.29
TM9SF3-203ENST00000464654 ARID3AQ99856 593 aa6.98□□□□□ -1.29
TM9SF3-203ENST00000464654 TRIM33Q9UPN9 1127 aa6.98□□□□□ -1.29
TM9SF3-203ENST00000464654 PPME1Q9Y570 386 aa6.98□□□□□ -1.29
TM9SF3-203ENST00000464654 ABL1P00519 1130 aa6.97□□□□□ -1.29
TM9SF3-203ENST00000464654 CES1P23141 567 aa6.97□□□□□ -1.29
TM9SF3-203ENST00000464654 AAMPQ13685 434 aa6.97□□□□□ -1.29
TM9SF3-203ENST00000464654 DOC2BQ14184 412 aa6.97□□□□□ -1.29
TM9SF3-203ENST00000464654 NKAPLQ5M9Q1 402 aa6.97□□□□□ -1.29
TM9SF3-203ENST00000464654 GJD3Q8N144 294 aa6.97□□□□□ -1.29
TM9SF3-203ENST00000464654 C1orf127Q8N9H9 656 aa6.97□□□□□ -1.29
TM9SF3-203ENST00000464654 TPSG1Q9NRR2 321 aa6.97□□□□□ -1.29
TM9SF3-203ENST00000464654 USP21Q9UK80 565 aa6.97□□□□□ -1.29
TM9SF3-203ENST00000464654 TNFRSF21O75509 655 aa6.96□□□□□ -1.3
TM9SF3-203ENST00000464654 ATP11AP98196 1134 aa6.96□□□□□ -1.3
TM9SF3-203ENST00000464654 SETDB1Q15047 1291 aa6.96□□□□□ -1.3
TM9SF3-203ENST00000464654 RSPO4Q2I0M5 234 aaPredicted RBP6.96□□□□□ -1.3
TM9SF3-203ENST00000464654 CEP135Q66GS9 1140 aa6.96□□□□□ -1.3
TM9SF3-203ENST00000464654 TMEM130Q8N3G9 435 aa6.96□□□□□ -1.3
TM9SF3-203ENST00000464654 SNX29Q8TEQ0 813 aa6.96□□□□□ -1.3
TM9SF3-203ENST00000464654 ADAM19Q9H013 955 aa6.96□□□□□ -1.3
TM9SF3-203ENST00000464654 RASSF4Q9H2L5 321 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms