RNA–Protein interactions for RNA: ENST00000438180.1

GSE1-206, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 1 (best)

Gene GSE1, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-206ENST00000438180 HSP90AA1P07900 732 aaKnown RBP20.23■□□□□ 0.83
GSE1-206ENST00000438180 IGHMBP2P38935 993 aaKnown RBP20.23■□□□□ 0.83
GSE1-206ENST00000438180 USPL1Q5W0Q7 1092 aa20.23■□□□□ 0.83
GSE1-206ENST00000438180 KBTBD3Q8NAB2 608 aa20.23■□□□□ 0.83
GSE1-206ENST00000438180 XAGE2Q96GT9 111 aa20.23■□□□□ 0.83
GSE1-206ENST00000438180 CDC5LQ99459 802 aaKnown RBP20.23■□□□□ 0.83
GSE1-206ENST00000438180 PDE8BO95263 885 aa20.22■□□□□ 0.83
GSE1-206ENST00000438180 GTF2E1P29083 439 aaPredicted RBP20.22■□□□□ 0.83
GSE1-206ENST00000438180 RFC4P35249 363 aa20.22■□□□□ 0.83
GSE1-206ENST00000438180 TRAPPC3LQ5T215 181 aa20.22■□□□□ 0.83
GSE1-206ENST00000438180 C4AP0C0L4 1744 aa20.22■□□□□ 0.83
GSE1-206ENST00000438180 PUM3Q15397 648 aaKnown RBP20.22■□□□□ 0.83
GSE1-206ENST00000438180 ANTXR1Q9H6X2 564 aa20.22■□□□□ 0.83
GSE1-206ENST00000438180 CCDC171Q6TFL3 1326 aa20.21■□□□□ 0.83
GSE1-206ENST00000438180 TBC1D9BQ66K14 1250 aa20.21■□□□□ 0.83
GSE1-206ENST00000438180 VGLL2Q8N8G2 317 aa20.21■□□□□ 0.83
GSE1-206ENST00000438180 ARHGEF1Q92888 912 aaKnown RBP20.21■□□□□ 0.83
GSE1-206ENST00000438180 BCL2L12Q9HB09 334 aa20.21■□□□□ 0.83
GSE1-206ENST00000438180 MED23Q9ULK4 1368 aa20.2■□□□□ 0.83
GSE1-206ENST00000438180 ARAP2Q8WZ64 1704 aa20.2■□□□□ 0.82
GSE1-206ENST00000438180 SF3B3Q15393 1217 aaKnown RBP20.2■□□□□ 0.82
GSE1-206ENST00000438180 SLC10A5Q5PT55 438 aa20.2■□□□□ 0.82
GSE1-206ENST00000438180 ZNF512BQ96KM6 892 aaPredicted RBP20.2■□□□□ 0.82
GSE1-206ENST00000438180 FAM227BQ96M60 508 aa20.2■□□□□ 0.82
GSE1-206ENST00000438180 GOLIM4O00461 696 aa20.19■□□□□ 0.82
GSE1-206ENST00000438180 ERFEQ4G0M1 354 aa20.19■□□□□ 0.82
GSE1-206ENST00000438180 DDX46Q7L014 1031 aaKnown RBP20.19■□□□□ 0.82
GSE1-206ENST00000438180 LPIN2Q92539 896 aa20.19■□□□□ 0.82
GSE1-206ENST00000438180 CHMP5Q9NZZ3 219 aa20.19■□□□□ 0.82
GSE1-206ENST00000438180 A0A0D9SFI3 127 aa20.19■□□□□ 0.82
GSE1-206ENST00000438180 CD2BP2O95400 341 aaKnown RBP20.19■□□□□ 0.82
GSE1-206ENST00000438180 NEK4P51957 841 aa20.19■□□□□ 0.82
GSE1-206ENST00000438180 TPTE2Q6XPS3 522 aa20.19■□□□□ 0.82
GSE1-206ENST00000438180 BICDL1Q6ZP65 573 aa20.19■□□□□ 0.82
GSE1-206ENST00000438180 NBPF5PQ86XG9 351 aaPredicted RBP20.19■□□□□ 0.82
GSE1-206ENST00000438180 EDC3Q96F86 508 aaKnown RBP20.19■□□□□ 0.82
GSE1-206ENST00000438180 SRP68Q9UHB9 627 aaKnown RBP20.19■□□□□ 0.82
GSE1-206ENST00000438180 PALD1Q9ULE6 856 aa20.19■□□□□ 0.82
GSE1-206ENST00000438180 CIZ1Q9ULV3 898 aaPredicted RBP20.19■□□□□ 0.82
GSE1-206ENST00000438180 SLC5A1P13866 664 aa20.18■□□□□ 0.82
GSE1-206ENST00000438180 KCNJ4P48050 445 aa20.18■□□□□ 0.82
GSE1-206ENST00000438180 RNF20Q5VTR2 975 aa20.18■□□□□ 0.82
GSE1-206ENST00000438180 UBR3Q6ZT12 1888 aa20.17■□□□□ 0.82
GSE1-206ENST00000438180 TRIM37O94972 964 aa20.17■□□□□ 0.82
GSE1-206ENST00000438180 UQCRFS1P1P0C7P4 283 aa20.17■□□□□ 0.82
GSE1-206ENST00000438180 ZKSCAN1P17029 563 aaPredicted RBP20.17■□□□□ 0.82
GSE1-206ENST00000438180 ADORA1P30542 326 aa20.17■□□□□ 0.82
GSE1-206ENST00000438180 MCMDC2Q4G0Z9 681 aa20.17■□□□□ 0.82
GSE1-206ENST00000438180 SPRYD3Q8NCJ5 442 aa20.17■□□□□ 0.82
GSE1-206ENST00000438180 MAP4K1Q92918 833 aa20.17■□□□□ 0.82
GSE1-206ENST00000438180 HELLSQ9NRZ9 838 aa20.17■□□□□ 0.82
GSE1-206ENST00000438180 CASZ1Q86V15 1759 aa20.17■□□□□ 0.82
GSE1-206ENST00000438180 CARMIL3Q8ND23 1372 aa20.16■□□□□ 0.82
GSE1-206ENST00000438180 ZFYP08048 801 aaPredicted RBP20.16■□□□□ 0.82
GSE1-206ENST00000438180 SEC31BQ9NQW1 1179 aa20.16■□□□□ 0.82
GSE1-206ENST00000438180 LRRC4BQ9NT99 713 aa20.16■□□□□ 0.82
GSE1-206ENST00000438180 SSFA2P28290 1259 aa20.16■□□□□ 0.82
GSE1-206ENST00000438180 NBR1Q14596 966 aa20.16■□□□□ 0.82
GSE1-206ENST00000438180 ANKRD18AQ8IVF6 992 aa20.16■□□□□ 0.82
GSE1-206ENST00000438180 KCNB2Q92953 911 aa20.16■□□□□ 0.82
GSE1-206ENST00000438180 NLRP3Q96P20 1036 aa20.16■□□□□ 0.82
GSE1-206ENST00000438180 SNX14Q9Y5W7 946 aa20.16■□□□□ 0.82
GSE1-206ENST00000438180 PHF14O94880 888 aa20.15■□□□□ 0.82
GSE1-206ENST00000438180 FGFR2P21802 821 aa20.15■□□□□ 0.82
GSE1-206ENST00000438180 FKBP4Q02790 459 aaKnown RBP eCLIP20.15■□□□□ 0.82
GSE1-206ENST00000438180 PTH1RQ03431 593 aa20.15■□□□□ 0.82
GSE1-206ENST00000438180 TTF1Q15361 905 aaPredicted RBP20.15■□□□□ 0.82
GSE1-206ENST00000438180 HMG20BQ9P0W2 317 aa20.15■□□□□ 0.82
GSE1-206ENST00000438180 RBM8AQ9Y5S9 174 aaKnown RBP20.15■□□□□ 0.82
GSE1-206ENST00000438180 NDUFB9Q9Y6M9 179 aa20.15■□□□□ 0.82
GSE1-206ENST00000438180 NPHP1O15259 732 aa20.13■□□□□ 0.81
GSE1-206ENST00000438180 RNF113AO15541 343 aaKnown RBP20.13■□□□□ 0.81
GSE1-206ENST00000438180 NECTIN1Q15223 517 aa20.13■□□□□ 0.81
GSE1-206ENST00000438180 TM6SF1Q9BZW5 370 aa20.13■□□□□ 0.81
GSE1-206ENST00000438180 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.13■□□□□ 0.816e-7■■□□□ 13.7
GSE1-206ENST00000438180 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.13■□□□□ 0.81
GSE1-206ENST00000438180 RXRBP28702 533 aa20.13■□□□□ 0.81
GSE1-206ENST00000438180 ARID4AP29374 1257 aaPredicted RBP20.13■□□□□ 0.81
GSE1-206ENST00000438180 ZSCAN25Q6NSZ9 544 aa20.13■□□□□ 0.81
GSE1-206ENST00000438180 PRPF40BQ6NWY9 871 aaKnown RBP20.13■□□□□ 0.81
GSE1-206ENST00000438180 BSDC1Q9NW68 430 aaPredicted RBP20.13■□□□□ 0.81
GSE1-206ENST00000438180 MYH7P12883 1935 aa20.12■□□□□ 0.81
GSE1-206ENST00000438180 TAF5LO75529 589 aa20.12■□□□□ 0.81
GSE1-206ENST00000438180 PSMA5P28066 241 aa20.12■□□□□ 0.81
GSE1-206ENST00000438180 DDIT3P35638 169 aa20.12■□□□□ 0.81
GSE1-206ENST00000438180 ZMYM1Q5SVZ6 1142 aa20.12■□□□□ 0.81
GSE1-206ENST00000438180 SMIM5Q71RC9 77 aa20.12■□□□□ 0.81
GSE1-206ENST00000438180 U3KPZ7 1027 aaPredicted RBP20.12■□□□□ 0.81
GSE1-206ENST00000438180 NFKBIBQ15653 356 aa20.11■□□□□ 0.81
GSE1-206ENST00000438180 CREB3L3Q68CJ9 461 aa20.11■□□□□ 0.81
GSE1-206ENST00000438180 CCDC102BQ68D86 513 aa20.11■□□□□ 0.81
GSE1-206ENST00000438180 ZNF589Q86UQ0 364 aaPredicted RBP20.11■□□□□ 0.81
GSE1-206ENST00000438180 AMIGO3Q86WK7 504 aa20.11■□□□□ 0.81
GSE1-206ENST00000438180 CWC22Q9HCG8 908 aaKnown RBP20.11■□□□□ 0.81
GSE1-206ENST00000438180 AKAP11Q9UKA4 1901 aa20.11■□□□□ 0.81
GSE1-206ENST00000438180 PLSCR1O15162 318 aa20.1■□□□□ 0.81
GSE1-206ENST00000438180 CHRNDQ07001 517 aa20.1■□□□□ 0.81
GSE1-206ENST00000438180 MCAMP43121 646 aa20.1■□□□□ 0.81
GSE1-206ENST00000438180 ZAP70P43403 619 aa20.1■□□□□ 0.81
GSE1-206ENST00000438180 KRT32Q14532 448 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms