RNA–Protein interactions for RNA: ENST00000412844.6

NR1I3-208, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-208ENST00000412844 PHTF2Q8N3S3 785 aa9.6□□□□□ -0.87
NR1I3-208ENST00000412844 CABP1Q9NZU7 370 aa9.6□□□□□ -0.87
NR1I3-208ENST00000412844 MAFBQ9Y5Q3 323 aaPredicted RBP9.6□□□□□ -0.87
NR1I3-208ENST00000412844 GOLGB1Q14789 3259 aaKnown RBP9.6□□□□□ -0.87
NR1I3-208ENST00000412844 LZTS3O60299 673 aaPredicted RBP9.59□□□□□ -0.87
NR1I3-208ENST00000412844 RFX1P22670 979 aa9.59□□□□□ -0.87
NR1I3-208ENST00000412844 TRIM26Q12899 539 aaPredicted RBP9.59□□□□□ -0.87
NR1I3-208ENST00000412844 EML3Q32P44 896 aa9.59□□□□□ -0.87
NR1I3-208ENST00000412844 OXLD1Q5BKU9 147 aa9.59□□□□□ -0.87
NR1I3-208ENST00000412844 COL24A1Q17RW2 1714 aa9.59□□□□□ -0.87
NR1I3-208ENST00000412844 USP17L3A6NCW0 530 aa9.58□□□□□ -0.88
NR1I3-208ENST00000412844 USP17L4A6NCW7 530 aa9.58□□□□□ -0.88
NR1I3-208ENST00000412844 IL2RBP14784 551 aa9.58□□□□□ -0.88
NR1I3-208ENST00000412844 NNTQ13423 1086 aa9.58□□□□□ -0.88
NR1I3-208ENST00000412844 USP17L2Q6R6M4 530 aa9.58□□□□□ -0.88
NR1I3-208ENST00000412844 PTF1AQ7RTS3 328 aa9.58□□□□□ -0.88
NR1I3-208ENST00000412844 USP17L1Q7RTZ2 530 aa9.58□□□□□ -0.88
NR1I3-208ENST00000412844 CCDC85AQ96PX6 553 aaPredicted RBP9.58□□□□□ -0.88
NR1I3-208ENST00000412844 TOR4AQ9NXH8 423 aa9.58□□□□□ -0.88
NR1I3-208ENST00000412844 PGPEP1Q9NXJ5 209 aa9.58□□□□□ -0.88
NR1I3-208ENST00000412844 EMILIN1Q9Y6C2 1016 aa9.58□□□□□ -0.88
NR1I3-208ENST00000412844 TTC21BQ7Z4L5 1316 aa9.57□□□□□ -0.88
NR1I3-208ENST00000412844 NFAT5O94916 1531 aa9.57□□□□□ -0.88
NR1I3-208ENST00000412844 ERVH48-1M5A8F1 160 aa9.57□□□□□ -0.88
NR1I3-208ENST00000412844 MYCP01106 439 aaPredicted RBP9.57□□□□□ -0.88
NR1I3-208ENST00000412844 TRIM67Q6ZTA4 783 aa9.57□□□□□ -0.88
NR1I3-208ENST00000412844 PLEKHM2Q8IWE5 1019 aa9.57□□□□□ -0.88
NR1I3-208ENST00000412844 DEPDC4Q8N2C3 294 aa9.57□□□□□ -0.88
NR1I3-208ENST00000412844 BTAF1O14981 1849 aa9.56□□□□□ -0.88
NR1I3-208ENST00000412844 J3QL48 77 aa9.56□□□□□ -0.88
NR1I3-208ENST00000412844 USP4Q13107 963 aa9.56□□□□□ -0.88
NR1I3-208ENST00000412844 NCOA4Q13772 614 aa9.56□□□□□ -0.88
NR1I3-208ENST00000412844 KAT6BQ8WYB5 2073 aa9.55□□□□□ -0.88
NR1I3-208ENST00000412844 RGPD5Q99666 1765 aa9.55□□□□□ -0.88
NR1I3-208ENST00000412844 USP31Q70CQ4 1352 aa9.55□□□□□ -0.88
NR1I3-208ENST00000412844 NR3C2P08235 984 aa9.55□□□□□ -0.88
NR1I3-208ENST00000412844 PPP1R26Q5T8A7 1209 aaPredicted RBP9.55□□□□□ -0.88
NR1I3-208ENST00000412844 NOD1Q9Y239 953 aa9.55□□□□□ -0.88
NR1I3-208ENST00000412844 USP54Q70EL1 1684 aa9.55□□□□□ -0.88
NR1I3-208ENST00000412844 SHANK3Q9BYB0 1731 aa9.54□□□□□ -0.88
NR1I3-208ENST00000412844 KTN1Q86UP2 1357 aaKnown RBP9.54□□□□□ -0.88
NR1I3-208ENST00000412844 SMPD1P17405 629 aa9.54□□□□□ -0.88
NR1I3-208ENST00000412844 NBPF1Q3BBV0 1214 aa9.54□□□□□ -0.88
NR1I3-208ENST00000412844 TRAF7Q6Q0C0 670 aa9.54□□□□□ -0.88
NR1I3-208ENST00000412844 PBXIP1Q96AQ6 731 aa9.54□□□□□ -0.88
NR1I3-208ENST00000412844 VRTNQ9H8Y1 702 aa9.54□□□□□ -0.88
NR1I3-208ENST00000412844 NLRP2Q9NX02 1062 aa9.54□□□□□ -0.88
NR1I3-208ENST00000412844 TFCP2L1Q9NZI6 479 aa9.54□□□□□ -0.88
NR1I3-208ENST00000412844 FAM208AQ9UK61 1670 aaKnown RBP9.54□□□□□ -0.88
NR1I3-208ENST00000412844 ATP5J2-PTCD1G3V325 749 aa9.53□□□□□ -0.88
NR1I3-208ENST00000412844 ZNF827Q17R98 1081 aa9.53□□□□□ -0.88
NR1I3-208ENST00000412844 TSGA10IPQ3SY00 556 aa9.53□□□□□ -0.88
NR1I3-208ENST00000412844 TRIM50Q86XT4 487 aa9.53□□□□□ -0.88
NR1I3-208ENST00000412844 FLAD1Q8NFF5 587 aa9.53□□□□□ -0.88
NR1I3-208ENST00000412844 ACSBG1Q96GR2 724 aa9.53□□□□□ -0.88
NR1I3-208ENST00000412844 TMPRSS4Q9NRS4 437 aa9.53□□□□□ -0.88
NR1I3-208ENST00000412844 ANKRD36BQ8N2N9 1353 aa9.52□□□□□ -0.88
NR1I3-208ENST00000412844 SBNO2Q9Y2G9 1366 aa9.52□□□□□ -0.88
NR1I3-208ENST00000412844 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-208ENST00000412844 FAM187AA6NFU0 413 aa9.52□□□□□ -0.89
NR1I3-208ENST00000412844 ATP1A2P50993 1020 aa9.52□□□□□ -0.89
NR1I3-208ENST00000412844 WDR4P57081 412 aaKnown RBP9.52□□□□□ -0.89
NR1I3-208ENST00000412844 CC2D2BQ6DHV5 1058 aa9.52□□□□□ -0.89
NR1I3-208ENST00000412844 MON2Q7Z3U7 1717 aa9.52□□□□□ -0.89
NR1I3-208ENST00000412844 CYLDQ9NQC7 956 aa9.52□□□□□ -0.89
NR1I3-208ENST00000412844 LRRC4BQ9NT99 713 aa9.52□□□□□ -0.89
NR1I3-208ENST00000412844 MKRN1Q9UHC7 482 aaKnown RBP9.52□□□□□ -0.89
NR1I3-208ENST00000412844 CD2APQ9Y5K6 639 aa9.52□□□□□ -0.89
NR1I3-208ENST00000412844 PNPLA7Q6ZV29 1317 aa9.52□□□□□ -0.89
NR1I3-208ENST00000412844 GFRA3O60609 400 aa9.51□□□□□ -0.89
NR1I3-208ENST00000412844 ZIC2O95409 532 aaPredicted RBP9.51□□□□□ -0.89
NR1I3-208ENST00000412844 HSPA6P17066 643 aa9.51□□□□□ -0.89
NR1I3-208ENST00000412844 CGNL1Q0VF96 1302 aa9.51□□□□□ -0.89
NR1I3-208ENST00000412844 ATP10DQ9P241 1426 aa9.5□□□□□ -0.89
NR1I3-208ENST00000412844 ERVK-9P63128 1117 aa9.5□□□□□ -0.89
NR1I3-208ENST00000412844 LAPTM4AQ15012 233 aa9.5□□□□□ -0.89
NR1I3-208ENST00000412844 PKDCCQ504Y2 493 aa9.5□□□□□ -0.89
NR1I3-208ENST00000412844 HDGFL2Q7Z4V5 671 aaPredicted RBP9.5□□□□□ -0.89
NR1I3-208ENST00000412844 ANKRD24Q8TF21 1146 aa9.5□□□□□ -0.89
NR1I3-208ENST00000412844 RBM19Q9Y4C8 960 aaKnown RBP9.5□□□□□ -0.89
NR1I3-208ENST00000412844 LY75O60449 1722 aa9.5□□□□□ -0.89
NR1I3-208ENST00000412844 LTN1O94822 1766 aa9.5□□□□□ -0.89
NR1I3-208ENST00000412844 NSD3Q9BZ95 1437 aa9.49□□□□□ -0.89
NR1I3-208ENST00000412844 NRG2O14511 850 aaPredicted RBP9.49□□□□□ -0.89
NR1I3-208ENST00000412844 RASA1P20936 1047 aa9.49□□□□□ -0.89
NR1I3-208ENST00000412844 SCTRP47872 440 aa9.49□□□□□ -0.89
NR1I3-208ENST00000412844 ITPKCQ96DU7 683 aa9.49□□□□□ -0.89
NR1I3-208ENST00000412844 ADCY9O60503 1353 aa9.49□□□□□ -0.89
NR1I3-208ENST00000412844 EDC4Q6P2E9 1401 aaKnown RBP9.48□□□□□ -0.89
NR1I3-208ENST00000412844 GTF2IP78347 998 aa9.48□□□□□ -0.89
NR1I3-208ENST00000412844 CDCA8Q53HL2 280 aa9.48□□□□□ -0.89
NR1I3-208ENST00000412844 CYP2U1Q7Z449 544 aa9.48□□□□□ -0.89
NR1I3-208ENST00000412844 NLGN2Q8NFZ4 835 aa9.48□□□□□ -0.89
NR1I3-208ENST00000412844 IP6K1Q92551 441 aa9.48□□□□□ -0.89
NR1I3-208ENST00000412844 HPS1Q92902 700 aa9.48□□□□□ -0.89
NR1I3-208ENST00000412844 PUS7Q96PZ0 661 aaKnown RBP9.48□□□□□ -0.89
NR1I3-208ENST00000412844 TERF2IPQ9NYB0 399 aa9.48□□□□□ -0.89
NR1I3-208ENST00000412844 CCNL1Q9UK58 526 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-208ENST00000412844 ROCK2O75116 1388 aaKnown RBP9.48□□□□□ -0.89
NR1I3-208ENST00000412844 USP47Q96K76 1375 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms