RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 MAP3K9P80192 1104 aa11.16□□□□□ -0.62
SPEN-201ENST00000375759 BICDL2A1A5D9 508 aa11.16□□□□□ -0.62
SPEN-201ENST00000375759 C11orf95C9JLR9 678 aaPredicted RBP11.16□□□□□ -0.62
SPEN-201ENST00000375759 IFT74Q96LB3 600 aa11.16□□□□□ -0.62
SPEN-201ENST00000375759 CNNM2Q9H8M5 875 aa11.16□□□□□ -0.62
SPEN-201ENST00000375759 ZFYP08048 801 aaPredicted RBP11.16□□□□□ -0.62
SPEN-201ENST00000375759 ZEB2O60315 1214 aa11.16□□□□□ -0.62
SPEN-201ENST00000375759 NUDT16Q96DE0 195 aaKnown RBP11.16□□□□□ -0.62
SPEN-201ENST00000375759 ATP2A2P16615 1042 aaKnown RBP11.16□□□□□ -0.62
SPEN-201ENST00000375759 NCOA1Q15788 1441 aa11.16□□□□□ -0.62
SPEN-201ENST00000375759 MTRF1LQ9UGC7 380 aaKnown RBP11.16□□□□□ -0.62
SPEN-201ENST00000375759 CUL7Q14999 1698 aa11.16□□□□□ -0.62
SPEN-201ENST00000375759 TSPY2A6NKD2 308 aa11.16□□□□□ -0.62
SPEN-201ENST00000375759 ALDH3A1P30838 453 aa11.16□□□□□ -0.62
SPEN-201ENST00000375759 GSTA5Q7RTV2 222 aa11.16□□□□□ -0.62
SPEN-201ENST00000375759 ANKRD24Q8TF21 1146 aa11.16□□□□□ -0.62
SPEN-201ENST00000375759 CCDC42Q96M95 316 aa11.16□□□□□ -0.62
SPEN-201ENST00000375759 SMAP1Q8IYB5 467 aaPredicted RBP11.16□□□□□ -0.62
SPEN-201ENST00000375759 ATP5DP30049 168 aa11.15□□□□□ -0.62
SPEN-201ENST00000375759 F6X3S4 739 aa11.15□□□□□ -0.62
SPEN-201ENST00000375759 ZBTB43O43298 467 aa11.15□□□□□ -0.62
SPEN-201ENST00000375759 ATP11AP98196 1134 aa11.15□□□□□ -0.62
SPEN-201ENST00000375759 WTAPQ15007 396 aa11.15□□□□□ -0.62
SPEN-201ENST00000375759 SELENOSQ9BQE4 189 aa11.15□□□□□ -0.62
SPEN-201ENST00000375759 TTC21BQ7Z4L5 1316 aa11.15□□□□□ -0.62
SPEN-201ENST00000375759 A0A1B0GUL7 405 aa11.15□□□□□ -0.62
SPEN-201ENST00000375759 PPP1R1BQ9UD71 204 aaPredicted RBP11.15□□□□□ -0.62
SPEN-201ENST00000375759 CEP128Q6ZU80 1094 aa11.15□□□□□ -0.62
SPEN-201ENST00000375759 AFMP43652 599 aa11.15□□□□□ -0.62
SPEN-201ENST00000375759 SAMM50Q9Y512 469 aa11.15□□□□□ -0.62
SPEN-201ENST00000375759 NAIPQ13075 1403 aa11.15□□□□□ -0.62
SPEN-201ENST00000375759 DACT1Q9NYF0 836 aa11.15□□□□□ -0.62
SPEN-201ENST00000375759 PCF11O94913 1555 aaKnown RBP11.15□□□□□ -0.62
SPEN-201ENST00000375759 F13A1P00488 732 aa11.15□□□□□ -0.62
SPEN-201ENST00000375759 PRIM1P49642 420 aaKnown RBP11.15□□□□□ -0.62
SPEN-201ENST00000375759 PTGS1P23219 599 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 CCDC50Q8IVM0 306 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 BICD1Q96G01 975 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 ALG1Q9BT22 464 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 STMN2Q93045 179 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 DNAJC25Q9H1X3 360 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 KIAA1524Q8TCG1 905 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 CNGA4Q8IV77 575 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 SF3B2Q13435 895 aaKnown RBP11.14□□□□□ -0.63
SPEN-201ENST00000375759 TUBB2AQ13885 445 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 TUBB2BQ9BVA1 445 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 MKRN1Q9UHC7 482 aaKnown RBP11.14□□□□□ -0.63
SPEN-201ENST00000375759 TNNC1P63316 161 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 TRAF1Q13077 416 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 CCDC63Q8NA47 563 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 SDSP20132 328 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 BICDL1Q6ZP65 573 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 C10orf67Q8IYJ2 551 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 PPP1R42Q7Z4L9 355 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 PSMC4P43686 418 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 RAB3GAP1Q15042 981 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 CCDC14Q49A88 953 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 APBB1IPQ7Z5R6 666 aaPredicted RBP11.14□□□□□ -0.63
SPEN-201ENST00000375759 MPHOSPH6Q99547 160 aaKnown RBP11.14□□□□□ -0.63
SPEN-201ENST00000375759 MAP3K2Q9Y2U5 619 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 RTN1Q16799 776 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 TRIM7Q9C029 511 aa11.14□□□□□ -0.63
SPEN-201ENST00000375759 CWC25Q9NXE8 425 aaPredicted RBP11.14□□□□□ -0.63
SPEN-201ENST00000375759 PPFIBP2Q8ND30 876 aa11.13□□□□□ -0.63
SPEN-201ENST00000375759 ARHGAP45Q92619 1136 aa11.13□□□□□ -0.63
SPEN-201ENST00000375759 WDHD1O75717 1129 aaPredicted RBP11.13□□□□□ -0.63
SPEN-201ENST00000375759 TRMT112Q9UI30 125 aaKnown RBP11.13□□□□□ -0.63
SPEN-201ENST00000375759 LDHCP07864 332 aa11.13□□□□□ -0.63
SPEN-201ENST00000375759 NEK11Q8NG66 645 aa11.13□□□□□ -0.63
SPEN-201ENST00000375759 KLF18A0A0U1RQI7 1052 aa11.13□□□□□ -0.63
SPEN-201ENST00000375759 IFIT1BQ5T764 474 aaKnown RBP11.13□□□□□ -0.63
SPEN-201ENST00000375759 SKAP1Q86WV1 359 aa11.13□□□□□ -0.63
SPEN-201ENST00000375759 AQRO60306 1485 aaKnown RBP eCLIP11.13□□□□□ -0.636e-7■■■■■ 27.6
SPEN-201ENST00000375759 NAA25Q14CX7 972 aa11.13□□□□□ -0.63
SPEN-201ENST00000375759 DNAJC21Q5F1R6 531 aaKnown RBP11.13□□□□□ -0.63
SPEN-201ENST00000375759 GNAQP50148 359 aa11.13□□□□□ -0.63
SPEN-201ENST00000375759 POTEDQ86YR6 584 aa11.13□□□□□ -0.63
SPEN-201ENST00000375759 CDC5LQ99459 802 aaKnown RBP11.13□□□□□ -0.63
SPEN-201ENST00000375759 PSMD1Q99460 953 aa11.13□□□□□ -0.63
SPEN-201ENST00000375759 LMOD1P29536 600 aaPredicted RBP11.13□□□□□ -0.63
SPEN-201ENST00000375759 UBXN1Q04323 297 aa11.13□□□□□ -0.63
SPEN-201ENST00000375759 ATL3Q6DD88 541 aa11.13□□□□□ -0.63
SPEN-201ENST00000375759 TXNDC16Q9P2K2 825 aa11.13□□□□□ -0.63
SPEN-201ENST00000375759 KIF3CO14782 793 aa11.13□□□□□ -0.63
SPEN-201ENST00000375759 HAND2P61296 217 aa11.13□□□□□ -0.63
SPEN-201ENST00000375759 CAPZA3Q96KX2 299 aa11.13□□□□□ -0.63
SPEN-201ENST00000375759 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.13□□□□□ -0.633e-7■■□□□ 13.2
SPEN-201ENST00000375759 HLA-DOAP06340 250 aa11.12□□□□□ -0.63
SPEN-201ENST00000375759 CFAP65Q6ZU64 1925 aaKnown RBP11.12□□□□□ -0.63
SPEN-201ENST00000375759 DNM1Q05193 864 aaKnown RBP11.12□□□□□ -0.63
SPEN-201ENST00000375759 CACNA2D3Q8IZS8 1091 aa11.12□□□□□ -0.63
SPEN-201ENST00000375759 ESR2Q92731 530 aa11.12□□□□□ -0.63
SPEN-201ENST00000375759 UTP14AQ9BVJ6 771 aaKnown RBP11.12□□□□□ -0.63
SPEN-201ENST00000375759 GUCA1BQ9UMX6 200 aa11.12□□□□□ -0.63
SPEN-201ENST00000375759 SPTLC2O15270 562 aa11.12□□□□□ -0.63
SPEN-201ENST00000375759 PTCD1O75127 700 aaKnown RBP11.12□□□□□ -0.63
SPEN-201ENST00000375759 CIB2O75838 187 aa11.12□□□□□ -0.63
SPEN-201ENST00000375759 CFAP58Q5T655 872 aa11.12□□□□□ -0.63
SPEN-201ENST00000375759 AFAP1L1Q8TED9 768 aa11.12□□□□□ -0.63
SPEN-201ENST00000375759 RPGRQ92834 1020 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms