RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 KBTBD3Q8NAB2 608 aa18.97■□□□□ 0.63
HDAC8-209ENST00000373589 MED23Q9ULK4 1368 aa18.97■□□□□ 0.63
HDAC8-209ENST00000373589 ST18O60284 1047 aa18.97■□□□□ 0.63
HDAC8-209ENST00000373589 PDE8BO95263 885 aa18.97■□□□□ 0.63
HDAC8-209ENST00000373589 RBM6P78332 1123 aaKnown RBP18.97■□□□□ 0.63
HDAC8-209ENST00000373589 PTH1RQ03431 593 aa18.97■□□□□ 0.63
HDAC8-209ENST00000373589 SPRYD3Q8NCJ5 442 aa18.97■□□□□ 0.63
HDAC8-209ENST00000373589 SEC31BQ9NQW1 1179 aa18.97■□□□□ 0.63
HDAC8-209ENST00000373589 PAG1Q9NWQ8 432 aa18.97■□□□□ 0.63
HDAC8-209ENST00000373589 ABCC12Q96J65 1359 aa18.96■□□□□ 0.63
HDAC8-209ENST00000373589 MROH5Q6ZUA9 1318 aa18.96■□□□□ 0.63
HDAC8-209ENST00000373589 IFIT1P09914 478 aaKnown RBP18.96■□□□□ 0.63
HDAC8-209ENST00000373589 ERFEQ4G0M1 354 aa18.96■□□□□ 0.63
HDAC8-209ENST00000373589 CCDC158Q5M9N0 1113 aa18.96■□□□□ 0.63
HDAC8-209ENST00000373589 SLC10A5Q5PT55 438 aa18.96■□□□□ 0.63
HDAC8-209ENST00000373589 DDX46Q7L014 1031 aaKnown RBP18.96■□□□□ 0.63
HDAC8-209ENST00000373589 CCDC171Q6TFL3 1326 aa18.95■□□□□ 0.62
HDAC8-209ENST00000373589 DDIT3P35638 169 aa18.95■□□□□ 0.62
HDAC8-209ENST00000373589 SF3B3Q15393 1217 aaKnown RBP18.95■□□□□ 0.62
HDAC8-209ENST00000373589 SLC27A3Q5K4L6 730 aa18.95■□□□□ 0.62
HDAC8-209ENST00000373589 COL24A1Q17RW2 1714 aa18.95■□□□□ 0.62
HDAC8-209ENST00000373589 SPEF2Q9C093 1822 aa18.95■□□□□ 0.62
HDAC8-209ENST00000373589 GOLIM4O00461 696 aa18.94■□□□□ 0.62
HDAC8-209ENST00000373589 BICDL1Q6ZP65 573 aa18.94■□□□□ 0.62
HDAC8-209ENST00000373589 IL27Q8NEV9 243 aa18.94■□□□□ 0.62
HDAC8-209ENST00000373589 MAP4K1Q92918 833 aa18.94■□□□□ 0.62
HDAC8-209ENST00000373589 KCNB2Q92953 911 aa18.94■□□□□ 0.62
HDAC8-209ENST00000373589 SETDB2Q96T68 719 aa18.94■□□□□ 0.62
HDAC8-209ENST00000373589 NYXQ9GZU5 481 aa18.94■□□□□ 0.62
HDAC8-209ENST00000373589 TRIM37O94972 964 aa18.94■□□□□ 0.62
HDAC8-209ENST00000373589 FGFR2P21802 821 aa18.94■□□□□ 0.62
HDAC8-209ENST00000373589 TTC39AQ5SRH9 613 aa18.94■□□□□ 0.62
HDAC8-209ENST00000373589 TRAPPC3LQ5T215 181 aa18.94■□□□□ 0.62
HDAC8-209ENST00000373589 GORABQ5T7V8 394 aa18.94■□□□□ 0.62
HDAC8-209ENST00000373589 ZNF512BQ96KM6 892 aaPredicted RBP18.94■□□□□ 0.62
HDAC8-209ENST00000373589 SNX14Q9Y5W7 946 aa18.94■□□□□ 0.62
HDAC8-209ENST00000373589 ADRA2BP18089 450 aa18.93■□□□□ 0.62
HDAC8-209ENST00000373589 NEK4P51957 841 aa18.93■□□□□ 0.62
HDAC8-209ENST00000373589 NBR1Q14596 966 aa18.93■□□□□ 0.62
HDAC8-209ENST00000373589 MPHOSPH8Q99549 860 aa18.93■□□□□ 0.62
HDAC8-209ENST00000373589 C4AP0C0L4 1744 aa18.92■□□□□ 0.62
HDAC8-209ENST00000373589 RFC4P35249 363 aa18.92■□□□□ 0.62
HDAC8-209ENST00000373589 IGHMBP2P38935 993 aaKnown RBP18.92■□□□□ 0.62
HDAC8-209ENST00000373589 NECTIN1Q15223 517 aa18.92■□□□□ 0.62
HDAC8-209ENST00000373589 PUM3Q15397 648 aaKnown RBP18.92■□□□□ 0.62
HDAC8-209ENST00000373589 C3orf67Q6ZVT6 689 aa18.92■□□□□ 0.62
HDAC8-209ENST00000373589 ZNF589Q86UQ0 364 aaPredicted RBP18.92■□□□□ 0.62
HDAC8-209ENST00000373589 RASEFQ8IZ41 740 aa18.92■□□□□ 0.62
HDAC8-209ENST00000373589 LPIN2Q92539 896 aa18.91■□□□□ 0.62
HDAC8-209ENST00000373589 CHMP5Q9NZZ3 219 aa18.91■□□□□ 0.62
HDAC8-209ENST00000373589 CHGBP05060 677 aa18.91■□□□□ 0.62
HDAC8-209ENST00000373589 SCARF1Q14162 830 aa18.91■□□□□ 0.62
HDAC8-209ENST00000373589 CDC5LQ99459 802 aaKnown RBP18.91■□□□□ 0.62
HDAC8-209ENST00000373589 TAF5LO75529 589 aa18.9■□□□□ 0.62
HDAC8-209ENST00000373589 PHF14O94880 888 aa18.9■□□□□ 0.62
HDAC8-209ENST00000373589 MCM2P49736 904 aa18.9■□□□□ 0.62
HDAC8-209ENST00000373589 NFKBIBQ15653 356 aa18.9■□□□□ 0.62
HDAC8-209ENST00000373589 MCMDC2Q4G0Z9 681 aa18.9■□□□□ 0.62
HDAC8-209ENST00000373589 NBPF5PQ86XG9 351 aaPredicted RBP18.9■□□□□ 0.62
HDAC8-209ENST00000373589 HELBQ8NG08 1087 aaPredicted RBP18.9■□□□□ 0.62
HDAC8-209ENST00000373589 RBM8AQ9Y5S9 174 aaKnown RBP18.9■□□□□ 0.62
HDAC8-209ENST00000373589 COL4A1P02462 1669 aa18.89■□□□□ 0.61
HDAC8-209ENST00000373589 GTF2E1P29083 439 aaPredicted RBP18.89■□□□□ 0.61
HDAC8-209ENST00000373589 FKBP4Q02790 459 aaKnown RBP eCLIP18.89■□□□□ 0.61
HDAC8-209ENST00000373589 TPTE2Q6XPS3 522 aa18.89■□□□□ 0.61
HDAC8-209ENST00000373589 HELLSQ9NRZ9 838 aa18.89■□□□□ 0.61
HDAC8-209ENST00000373589 ARAP2Q8WZ64 1704 aa18.89■□□□□ 0.61
HDAC8-209ENST00000373589 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.88■□□□□ 0.61
HDAC8-209ENST00000373589 ZMYM1Q5SVZ6 1142 aa18.88■□□□□ 0.61
HDAC8-209ENST00000373589 PRPF40BQ6NWY9 871 aaKnown RBP18.88■□□□□ 0.61
HDAC8-209ENST00000373589 CIZ1Q9ULV3 898 aaPredicted RBP18.88■□□□□ 0.61
HDAC8-209ENST00000373589 UBR3Q6ZT12 1888 aa18.88■□□□□ 0.61
HDAC8-209ENST00000373589 RNF113AO15541 343 aaKnown RBP18.88■□□□□ 0.61
HDAC8-209ENST00000373589 ARID4AP29374 1257 aaPredicted RBP18.88■□□□□ 0.61
HDAC8-209ENST00000373589 MCAMP43121 646 aa18.88■□□□□ 0.61
HDAC8-209ENST00000373589 ZAP70P43403 619 aa18.88■□□□□ 0.61
HDAC8-209ENST00000373589 CREB3L3Q68CJ9 461 aa18.88■□□□□ 0.61
HDAC8-209ENST00000373589 CCDC102BQ68D86 513 aa18.88■□□□□ 0.61
HDAC8-209ENST00000373589 PROM2Q8N271 834 aa18.88■□□□□ 0.61
HDAC8-209ENST00000373589 SEC62Q99442 399 aaKnown RBP18.88■□□□□ 0.61
HDAC8-209ENST00000373589 UPF3BQ9BZI7 483 aaKnown RBP18.88■□□□□ 0.61
HDAC8-209ENST00000373589 HSP90AA1P07900 732 aaKnown RBP18.87■□□□□ 0.61
HDAC8-209ENST00000373589 SLC5A1P13866 664 aa18.87■□□□□ 0.61
HDAC8-209ENST00000373589 SSFA2P28290 1259 aa18.87■□□□□ 0.61
HDAC8-209ENST00000373589 ANKRD18AQ8IVF6 992 aa18.87■□□□□ 0.61
HDAC8-209ENST00000373589 TM6SF1Q9BZW5 370 aa18.87■□□□□ 0.61
HDAC8-209ENST00000373589 UQCRFS1P1P0C7P4 283 aa18.86■□□□□ 0.61
HDAC8-209ENST00000373589 PHKA1P46020 1223 aa18.86■□□□□ 0.61
HDAC8-209ENST00000373589 CHRNDQ07001 517 aa18.86■□□□□ 0.61
HDAC8-209ENST00000373589 TXNRD1Q16881 649 aa18.86■□□□□ 0.61
HDAC8-209ENST00000373589 NLRP3Q96P20 1036 aa18.86■□□□□ 0.61
HDAC8-209ENST00000373589 BSDC1Q9NW68 430 aaPredicted RBP18.86■□□□□ 0.61
HDAC8-209ENST00000373589 CARMIL3Q8ND23 1372 aa18.86■□□□□ 0.61
HDAC8-209ENST00000373589 CASZ1Q86V15 1759 aa18.86■□□□□ 0.61
HDAC8-209ENST00000373589 AKAP11Q9UKA4 1901 aa18.86■□□□□ 0.61
HDAC8-209ENST00000373589 SLC27A2O14975 620 aa18.86■□□□□ 0.61
HDAC8-209ENST00000373589 HMGB2P26583 209 aaKnown RBP18.86■□□□□ 0.61
HDAC8-209ENST00000373589 NFIXQ14938 502 aa18.86■□□□□ 0.61
HDAC8-209ENST00000373589 LRRFIP1Q32MZ4 808 aaKnown RBP18.86■□□□□ 0.61
HDAC8-209ENST00000373589 PI16Q6UXB8 463 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms