RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 RIOK3O14730 519 aaKnown RBP22.27■■□□□ 1.16
PSPC1-201ENST00000338910 TNNI3KQ59H18 835 aa22.27■■□□□ 1.16
PSPC1-201ENST00000338910 MARCH10Q8NA82 808 aaPredicted RBP22.27■■□□□ 1.16
PSPC1-201ENST00000338910 CCDC191Q8NCU4 936 aa22.27■■□□□ 1.16
PSPC1-201ENST00000338910 ACSBG1Q96GR2 724 aa22.27■■□□□ 1.16
PSPC1-201ENST00000338910 FPGT-TNNI3KV9GXZ4 949 aa22.27■■□□□ 1.16
PSPC1-201ENST00000338910 COL15A1P39059 1388 aa22.27■■□□□ 1.16
PSPC1-201ENST00000338910 PTH1RQ03431 593 aa22.27■■□□□ 1.16
PSPC1-201ENST00000338910 RASEFQ8IZ41 740 aa22.27■■□□□ 1.16
PSPC1-201ENST00000338910 SNX14Q9Y5W7 946 aa22.27■■□□□ 1.16
PSPC1-201ENST00000338910 TPM3P06753 285 aa22.26■■□□□ 1.15
PSPC1-201ENST00000338910 FAM227BQ96M60 508 aa22.26■■□□□ 1.15
PSPC1-201ENST00000338910 DBNLQ9UJU6 430 aaKnown RBP22.26■■□□□ 1.15
PSPC1-201ENST00000338910 CTIFO43310 598 aaKnown RBP22.26■■□□□ 1.15
PSPC1-201ENST00000338910 CYP19A1P11511 503 aaPredicted RBP22.26■■□□□ 1.15
PSPC1-201ENST00000338910 DOT1LQ8TEK3 1739 aa22.25■■□□□ 1.15
PSPC1-201ENST00000338910 STX6O43752 255 aa22.25■■□□□ 1.15
PSPC1-201ENST00000338910 GIMAP6Q6P9H5 292 aa22.25■■□□□ 1.15
PSPC1-201ENST00000338910 EDC3Q96F86 508 aaKnown RBP22.25■■□□□ 1.15
PSPC1-201ENST00000338910 C8orf37Q96NL8 207 aa22.25■■□□□ 1.15
PSPC1-201ENST00000338910 SYT1P21579 422 aa22.25■■□□□ 1.15
PSPC1-201ENST00000338910 CHAF1AQ13111 956 aaPredicted RBP22.25■■□□□ 1.15
PSPC1-201ENST00000338910 FSD1Q9BTV5 496 aa22.25■■□□□ 1.15
PSPC1-201ENST00000338910 F13A1P00488 732 aa22.24■■□□□ 1.15
PSPC1-201ENST00000338910 TTC14Q96N46 770 aa22.24■■□□□ 1.15
PSPC1-201ENST00000338910 NMIQ13287 307 aaPredicted RBP22.23■■□□□ 1.15
PSPC1-201ENST00000338910 TCIRG1Q13488 830 aa22.23■■□□□ 1.15
PSPC1-201ENST00000338910 KIF6Q6ZMV9 814 aa22.23■■□□□ 1.15
PSPC1-201ENST00000338910 NGLY1Q96IV0 654 aa22.23■■□□□ 1.15
PSPC1-201ENST00000338910 NDUFB9Q9Y6M9 179 aa22.23■■□□□ 1.15
PSPC1-201ENST00000338910 NWD2Q9ULI1 1742 aa22.23■■□□□ 1.15
PSPC1-201ENST00000338910 FIBPO43427 364 aa22.23■■□□□ 1.15
PSPC1-201ENST00000338910 PLCB2Q00722 1185 aa22.23■■□□□ 1.15
PSPC1-201ENST00000338910 BARGINQ6ZT62 677 aa22.23■■□□□ 1.15
PSPC1-201ENST00000338910 DBNDD2Q9BQY9 259 aa22.23■■□□□ 1.15
PSPC1-201ENST00000338910 ZBTB1Q9Y2K1 713 aa22.23■■□□□ 1.15
PSPC1-201ENST00000338910 SPDYE4A6NLX3 237 aa22.22■■□□□ 1.15
PSPC1-201ENST00000338910 TPRNQ4KMQ1 711 aa22.22■■□□□ 1.15
PSPC1-201ENST00000338910 ISCA1Q9BUE6 129 aa22.22■■□□□ 1.15
PSPC1-201ENST00000338910 ZNF594Q96JF6 807 aaPredicted RBP22.22■■□□□ 1.15
PSPC1-201ENST00000338910 ATP6V1DQ9Y5K8 247 aa22.22■■□□□ 1.15
PSPC1-201ENST00000338910 FAM98CQ17RN3 349 aaKnown RBP22.21■■□□□ 1.15
PSPC1-201ENST00000338910 PRPF40BQ6NWY9 871 aaKnown RBP22.21■■□□□ 1.15
PSPC1-201ENST00000338910 TJP1Q07157 1748 aa22.21■■□□□ 1.15
PSPC1-201ENST00000338910 ATP5JP18859 108 aa22.21■■□□□ 1.15
PSPC1-201ENST00000338910 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.21■■□□□ 1.15
PSPC1-201ENST00000338910 HIP1O00291 1037 aa22.2■■□□□ 1.14
PSPC1-201ENST00000338910 U2AF2P26368 475 aaKnown RBP eCLIP22.2■■□□□ 1.149e-7■■■■□ 19.4
PSPC1-201ENST00000338910 ATG9AQ7Z3C6 839 aa22.2■■□□□ 1.14
PSPC1-201ENST00000338910 A0A0D9SFI3 127 aa22.2■■□□□ 1.14
PSPC1-201ENST00000338910 CPA1P15085 419 aa22.2■■□□□ 1.14
PSPC1-201ENST00000338910 AK2P54819 239 aa22.2■■□□□ 1.14
PSPC1-201ENST00000338910 HLFQ16534 295 aa22.2■■□□□ 1.14
PSPC1-201ENST00000338910 RUFY3Q7L099 469 aa22.2■■□□□ 1.14
PSPC1-201ENST00000338910 NEUROD6Q96NK8 337 aa22.2■■□□□ 1.14
PSPC1-201ENST00000338910 LARP6Q9BRS8 491 aaKnown RBP22.2■■□□□ 1.14
PSPC1-201ENST00000338910 MAP3K15Q6ZN16 1313 aa22.2■■□□□ 1.14
PSPC1-201ENST00000338910 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.19■■□□□ 1.14
PSPC1-201ENST00000338910 GOLGA6L6A8MZA4 724 aa22.19■■□□□ 1.14
PSPC1-201ENST00000338910 FAM89AQ96GI7 184 aa22.19■■□□□ 1.14
PSPC1-201ENST00000338910 LIMCH1Q9UPQ0 1083 aa22.19■■□□□ 1.14
PSPC1-201ENST00000338910 JCADQ9P266 1359 aa22.19■■□□□ 1.14
PSPC1-201ENST00000338910 TIMM10P62072 90 aa22.19■■□□□ 1.14
PSPC1-201ENST00000338910 LRRC24Q50LG9 513 aa22.19■■□□□ 1.14
PSPC1-201ENST00000338910 SPC24Q8NBT2 197 aa22.19■■□□□ 1.14
PSPC1-201ENST00000338910 DNAJC2Q99543 621 aaKnown RBP22.19■■□□□ 1.14
PSPC1-201ENST00000338910 CCDC171Q6TFL3 1326 aa22.19■■□□□ 1.14
PSPC1-201ENST00000338910 KCNJ4P48050 445 aa22.18■■□□□ 1.14
PSPC1-201ENST00000338910 GIGYF2Q6Y7W6 1299 aaKnown RBP22.18■■□□□ 1.14
PSPC1-201ENST00000338910 CCDC85AQ96PX6 553 aaPredicted RBP22.18■■□□□ 1.14
PSPC1-201ENST00000338910 BCL9LQ86UU0 1499 aa22.18■■□□□ 1.14
PSPC1-201ENST00000338910 CASTP20810 708 aaKnown RBP22.18■■□□□ 1.14
PSPC1-201ENST00000338910 SMC3Q9UQE7 1217 aa22.18■■□□□ 1.14
PSPC1-201ENST00000338910 TRIM28Q13263 835 aaKnown RBP22.17■■□□□ 1.14
PSPC1-201ENST00000338910 ADCK5Q3MIX3 580 aa22.17■■□□□ 1.14
PSPC1-201ENST00000338910 FEZ1Q99689 392 aa22.17■■□□□ 1.14
PSPC1-201ENST00000338910 KCNQ2O43526 872 aa22.17■■□□□ 1.14
PSPC1-201ENST00000338910 GPTP24298 496 aa22.17■■□□□ 1.14
PSPC1-201ENST00000338910 NECTIN1Q15223 517 aa22.17■■□□□ 1.14
PSPC1-201ENST00000338910 PUS3Q9BZE2 481 aaKnown RBP22.17■■□□□ 1.14
PSPC1-201ENST00000338910 RBM8AQ9Y5S9 174 aaKnown RBP22.17■■□□□ 1.14
PSPC1-201ENST00000338910 CCDC192P0DO97 292 aa22.16■■□□□ 1.14
PSPC1-201ENST00000338910 DNM1Q05193 864 aaKnown RBP22.16■■□□□ 1.14
PSPC1-201ENST00000338910 TBC1D2BQ9UPU7 963 aa22.16■■□□□ 1.14
PSPC1-201ENST00000338910 EYA2O00167 538 aa22.16■■□□□ 1.14
PSPC1-201ENST00000338910 ATP6V1AP38606 617 aa22.16■■□□□ 1.14
PSPC1-201ENST00000338910 IL15P40933 162 aaPredicted RBP22.16■■□□□ 1.14
PSPC1-201ENST00000338910 SYNE4Q8N205 404 aa22.16■■□□□ 1.14
PSPC1-201ENST00000338910 MAP4K1Q92918 833 aa22.16■■□□□ 1.14
PSPC1-201ENST00000338910 JAKMIP1Q96N16 626 aaKnown RBP22.16■■□□□ 1.14
PSPC1-201ENST00000338910 CHGBP05060 677 aa22.15■■□□□ 1.14
PSPC1-201ENST00000338910 MTMR6Q9Y217 621 aa22.15■■□□□ 1.14
PSPC1-201ENST00000338910 NCBP1Q09161 790 aaKnown RBP22.15■■□□□ 1.14
PSPC1-201ENST00000338910 VPS72Q15906 364 aa22.15■■□□□ 1.14
PSPC1-201ENST00000338910 ZNF589Q86UQ0 364 aaPredicted RBP22.15■■□□□ 1.14
PSPC1-201ENST00000338910 LOC102724428A0A0B4J2F2 783 aa22.14■■□□□ 1.13
PSPC1-201ENST00000338910 IL6STP40189 918 aaPredicted RBP22.14■■□□□ 1.13
PSPC1-201ENST00000338910 SIK1P57059 783 aa22.14■■□□□ 1.13
PSPC1-201ENST00000338910 CCDC57Q2TAC2 916 aa22.14■■□□□ 1.13
PSPC1-201ENST00000338910 DDX46Q7L014 1031 aaKnown RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms