RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 RBSNQ9H1K0 784 aa15.77■□□□□ 0.11
RTN4-202ENST00000337526 VAT1LQ9HCJ6 419 aa15.77■□□□□ 0.11
RTN4-202ENST00000337526 PAG1Q9NWQ8 432 aa15.77■□□□□ 0.11
RTN4-202ENST00000337526 PRC1O43663 620 aa15.76■□□□□ 0.11
RTN4-202ENST00000337526 IFFO1Q0D2I5 559 aa15.76■□□□□ 0.11
RTN4-202ENST00000337526 CCDC40Q4G0X9 1142 aa15.76■□□□□ 0.11
RTN4-202ENST00000337526 G2E3Q7L622 706 aa15.76■□□□□ 0.11
RTN4-202ENST00000337526 TRIM47Q96LD4 638 aa15.76■□□□□ 0.11
RTN4-202ENST00000337526 KRT23Q9C075 422 aa15.76■□□□□ 0.11
RTN4-202ENST00000337526 KAT14Q9H8E8 782 aa15.76■□□□□ 0.11
RTN4-202ENST00000337526 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.76■□□□□ 0.115e-9■■■□□ 14.6
RTN4-202ENST00000337526 A2MP01023 1474 aa15.76■□□□□ 0.11
RTN4-202ENST00000337526 TARBP1Q13395 1621 aaKnown RBP15.76■□□□□ 0.11
RTN4-202ENST00000337526 AKR1B10O60218 316 aa15.76■□□□□ 0.11
RTN4-202ENST00000337526 CHST3Q7LGC8 479 aa15.76■□□□□ 0.11
RTN4-202ENST00000337526 NAA15Q9BXJ9 866 aaKnown RBP15.76■□□□□ 0.11
RTN4-202ENST00000337526 SLU7O95391 586 aaKnown RBP15.76■□□□□ 0.11
RTN4-202ENST00000337526 BMP15O95972 392 aa15.76■□□□□ 0.11
RTN4-202ENST00000337526 TRIM21P19474 475 aaKnown RBP15.76■□□□□ 0.11
RTN4-202ENST00000337526 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.76■□□□□ 0.11
RTN4-202ENST00000337526 V9GYY5 206 aaPredicted RBP15.76■□□□□ 0.11
RTN4-202ENST00000337526 ABCA5Q8WWZ7 1642 aa15.76■□□□□ 0.11
RTN4-202ENST00000337526 PZPP20742 1482 aa15.76■□□□□ 0.11
RTN4-202ENST00000337526 RTN1Q16799 776 aa15.76■□□□□ 0.11
RTN4-202ENST00000337526 DHX32Q7L7V1 743 aaKnown RBP15.76■□□□□ 0.11
RTN4-202ENST00000337526 NPATQ14207 1427 aa15.76■□□□□ 0.11
RTN4-202ENST00000337526 TCERG1LQ5VWI1 586 aa15.75■□□□□ 0.11
RTN4-202ENST00000337526 STX8Q9UNK0 236 aa15.75■□□□□ 0.11
RTN4-202ENST00000337526 CTR9Q6PD62 1173 aa15.75■□□□□ 0.11
RTN4-202ENST00000337526 FAM114A1Q8IWE2 563 aa15.75■□□□□ 0.11
RTN4-202ENST00000337526 ESR2Q92731 530 aa15.75■□□□□ 0.11
RTN4-202ENST00000337526 TRIM35Q9UPQ4 493 aa15.75■□□□□ 0.11
RTN4-202ENST00000337526 UHRF1BP1Q6BDS2 1440 aa15.75■□□□□ 0.11
RTN4-202ENST00000337526 LDHCP07864 332 aa15.75■□□□□ 0.11
RTN4-202ENST00000337526 SPAG1Q07617 926 aa15.75■□□□□ 0.11
RTN4-202ENST00000337526 APOBRQ0VD83 1088 aa15.75■□□□□ 0.11
RTN4-202ENST00000337526 RRAGBQ5VZM2 374 aa15.75■□□□□ 0.11
RTN4-202ENST00000337526 CNNM2Q9H8M5 875 aa15.75■□□□□ 0.11
RTN4-202ENST00000337526 RRAGDQ9NQL2 400 aaPredicted RBP15.75■□□□□ 0.11
RTN4-202ENST00000337526 KIAA0556O60303 1618 aa15.75■□□□□ 0.11
RTN4-202ENST00000337526 RTL1A6NKG5 1358 aa15.75■□□□□ 0.11
RTN4-202ENST00000337526 MATR3P43243 847 aaKnown RBP eCLIP15.75■□□□□ 0.112e-7■■□□□ 13.8
RTN4-202ENST00000337526 CTAGE1Q96RT6 745 aa15.75■□□□□ 0.11
RTN4-202ENST00000337526 PTPDC1A2A3K4 754 aa15.74■□□□□ 0.11
RTN4-202ENST00000337526 RNF216Q9NWF9 866 aaPredicted RBP15.74■□□□□ 0.11
RTN4-202ENST00000337526 TMCO5BA8MYB1 307 aa15.74■□□□□ 0.11
RTN4-202ENST00000337526 EIF2AK4Q9P2K8 1649 aaKnown RBP15.74■□□□□ 0.11
RTN4-202ENST00000337526 ITSN2Q9NZM3 1697 aa15.74■□□□□ 0.11
RTN4-202ENST00000337526 POTEJP0CG39 1038 aa15.74■□□□□ 0.11
RTN4-202ENST00000337526 RMND1Q9NWS8 449 aa15.74■□□□□ 0.11
RTN4-202ENST00000337526 PBRM1Q86U86 1689 aa15.74■□□□□ 0.11
RTN4-202ENST00000337526 BAG3O95817 575 aa15.74■□□□□ 0.11
RTN4-202ENST00000337526 EHBP1Q8NDI1 1231 aa15.74■□□□□ 0.11
RTN4-202ENST00000337526 LRRC59Q96AG4 307 aaKnown RBP15.74■□□□□ 0.11
RTN4-202ENST00000337526 BCCIPQ9P287 314 aaKnown RBP eCLIP15.74■□□□□ 0.11
RTN4-202ENST00000337526 TUBB4AP04350 444 aa15.73■□□□□ 0.11
RTN4-202ENST00000337526 NOP2P46087 812 aaKnown RBP15.73■□□□□ 0.11
RTN4-202ENST00000337526 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.73■□□□□ 0.118e-8■□□□□ 10.6
RTN4-202ENST00000337526 MSH6P52701 1360 aa15.73■□□□□ 0.11
RTN4-202ENST00000337526 TNRQ92752 1358 aa15.73■□□□□ 0.11
RTN4-202ENST00000337526 ZFYVE9O95405 1425 aa15.73■□□□□ 0.11
RTN4-202ENST00000337526 LIG1P18858 919 aa15.73■□□□□ 0.11
RTN4-202ENST00000337526 TNIP1Q15025 636 aa15.73■□□□□ 0.11
RTN4-202ENST00000337526 PPP1R1BQ9UD71 204 aaPredicted RBP15.73■□□□□ 0.11
RTN4-202ENST00000337526 RAD50Q92878 1312 aa15.73■□□□□ 0.11
RTN4-202ENST00000337526 MYO1BO43795 1136 aa15.73■□□□□ 0.11
RTN4-202ENST00000337526 CYP7A1P22680 504 aa15.73■□□□□ 0.11
RTN4-202ENST00000337526 GBP2P32456 591 aaPredicted RBP15.73■□□□□ 0.11
RTN4-202ENST00000337526 MAP2K1Q02750 393 aaPredicted RBP15.73■□□□□ 0.11
RTN4-202ENST00000337526 MCM6Q14566 821 aa15.73■□□□□ 0.11
RTN4-202ENST00000337526 SLF2Q8IX21 1173 aa15.73■□□□□ 0.11
RTN4-202ENST00000337526 NFATC2IPQ8NCF5 419 aa15.73■□□□□ 0.11
RTN4-202ENST00000337526 SLC4A4Q9Y6R1 1079 aa15.73■□□□□ 0.11
RTN4-202ENST00000337526 UBE2Q2Q8WVN8 375 aa15.72■□□□□ 0.11
RTN4-202ENST00000337526 IQSEC3Q9UPP2 1182 aaPredicted RBP15.72■□□□□ 0.11
RTN4-202ENST00000337526 MAP3K19Q56UN5 1328 aa15.72■□□□□ 0.11
RTN4-202ENST00000337526 NCKAP5LQ9HCH0 1330 aa15.72■□□□□ 0.11
RTN4-202ENST00000337526 GSTTP1A0A1W2PQM5 241 aa15.72■□□□□ 0.11
RTN4-202ENST00000337526 CTAGE15A4D2H0 777 aa15.72■□□□□ 0.11
RTN4-202ENST00000337526 CTAGE8P0CG41 777 aa15.72■□□□□ 0.11
RTN4-202ENST00000337526 CALRP27797 417 aaKnown RBP15.72■□□□□ 0.11
RTN4-202ENST00000337526 CTAGE6Q86UF2 777 aa15.72■□□□□ 0.11
RTN4-202ENST00000337526 CTAGE4Q8IX94 777 aa15.72■□□□□ 0.11
RTN4-202ENST00000337526 PAF1Q8N7H5 531 aa15.72■□□□□ 0.11
RTN4-202ENST00000337526 SRRTQ9BXP5 876 aaKnown RBP15.72■□□□□ 0.11
RTN4-202ENST00000337526 GOPCQ9HD26 462 aa15.72■□□□□ 0.11
RTN4-202ENST00000337526 TRIM75PA6NK02 468 aa15.72■□□□□ 0.11
RTN4-202ENST00000337526 ADAMTS2O95450 1211 aa15.72■□□□□ 0.11
RTN4-202ENST00000337526 SLC4A8Q2Y0W8 1093 aa15.72■□□□□ 0.11
RTN4-202ENST00000337526 IFIT1BQ5T764 474 aaKnown RBP15.72■□□□□ 0.11
RTN4-202ENST00000337526 IFNKQ9P0W0 207 aa15.72■□□□□ 0.11
RTN4-202ENST00000337526 UHRF1BP1LA0JNW5 1464 aa15.72■□□□□ 0.11
RTN4-202ENST00000337526 RNF113AO15541 343 aaKnown RBP15.71■□□□□ 0.11
RTN4-202ENST00000337526 CRNKL1Q9BZJ0 848 aaKnown RBP15.71■□□□□ 0.11
RTN4-202ENST00000337526 FAM107BQ9H098 131 aa15.71■□□□□ 0.11
RTN4-202ENST00000337526 ZMYM4Q5VZL5 1548 aa15.71■□□□□ 0.11
RTN4-202ENST00000337526 EZRP15311 586 aaKnown RBP15.71■□□□□ 0.11
RTN4-202ENST00000337526 CYLC1P35663 651 aaPredicted RBP15.71■□□□□ 0.11
RTN4-202ENST00000337526 ZCRB1Q8TBF4 217 aaKnown RBP15.71■□□□□ 0.11
RTN4-202ENST00000337526 TFCP2Q12800 502 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms