RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 C19orf44Q9H6X5 657 aa23.89■■□□□ 1.41
LTBP3-201ENST00000301873 RFC4P35249 363 aa23.88■■□□□ 1.41
LTBP3-201ENST00000301873 SLF2Q8IX21 1173 aa23.88■■□□□ 1.41
LTBP3-201ENST00000301873 WDR62O43379 1518 aa23.88■■□□□ 1.41
LTBP3-201ENST00000301873 PNMA6EA0A0J9YXQ4 647 aa23.88■■□□□ 1.41
LTBP3-201ENST00000301873 FAM173BQ6P4H8 233 aa23.88■■□□□ 1.41
LTBP3-201ENST00000301873 AOPEPQ8N6M6 819 aa23.88■■□□□ 1.41
LTBP3-201ENST00000301873 INTS4Q96HW7 963 aaKnown RBP23.88■■□□□ 1.41
LTBP3-201ENST00000301873 NPC1L1Q9UHC9 1359 aa23.88■■□□□ 1.41
LTBP3-201ENST00000301873 KRT23Q9C075 422 aa23.88■■□□□ 1.41
LTBP3-201ENST00000301873 ABCC10Q5T3U5 1492 aa23.88■■□□□ 1.41
LTBP3-201ENST00000301873 SPTY2D1Q68D10 685 aaPredicted RBP23.87■■□□□ 1.41
LTBP3-201ENST00000301873 DHX32Q7L7V1 743 aaKnown RBP23.87■■□□□ 1.41
LTBP3-201ENST00000301873 CALML4Q96GE6 196 aa23.87■■□□□ 1.41
LTBP3-201ENST00000301873 NLRP3Q96P20 1036 aa23.87■■□□□ 1.41
LTBP3-201ENST00000301873 IFIT1BQ5T764 474 aaKnown RBP23.87■■□□□ 1.41
LTBP3-201ENST00000301873 SIRT1Q96EB6 747 aa23.87■■□□□ 1.41
LTBP3-201ENST00000301873 ABCC1P33527 1531 aa23.87■■□□□ 1.41
LTBP3-201ENST00000301873 PAFAH1B1P43034 410 aa23.87■■□□□ 1.41
LTBP3-201ENST00000301873 TYRO3Q06418 890 aa23.87■■□□□ 1.41
LTBP3-201ENST00000301873 NAA16Q6N069 864 aaPredicted RBP23.87■■□□□ 1.41
LTBP3-201ENST00000301873 MIGA1Q8NAN2 632 aa23.87■■□□□ 1.41
LTBP3-201ENST00000301873 SPTLC2O15270 562 aa23.87■■□□□ 1.41
LTBP3-201ENST00000301873 KANK3Q6NY19 840 aa23.87■■□□□ 1.41
LTBP3-201ENST00000301873 TMTC2Q8N394 836 aa23.87■■□□□ 1.41
LTBP3-201ENST00000301873 FAM89AQ96GI7 184 aa23.87■■□□□ 1.41
LTBP3-201ENST00000301873 DCAF5Q96JK2 942 aa23.87■■□□□ 1.41
LTBP3-201ENST00000301873 ZKSCAN5Q9Y2L8 839 aa23.87■■□□□ 1.41
LTBP3-201ENST00000301873 UHRF1BP1Q6BDS2 1440 aa23.87■■□□□ 1.41
LTBP3-201ENST00000301873 ITSN2Q9NZM3 1697 aa23.87■■□□□ 1.41
LTBP3-201ENST00000301873 USO1O60763 962 aaKnown RBP23.86■■□□□ 1.41
LTBP3-201ENST00000301873 DHX37Q8IY37 1157 aaKnown RBP23.86■■□□□ 1.41
LTBP3-201ENST00000301873 CCDC171Q6TFL3 1326 aa23.86■■□□□ 1.41
LTBP3-201ENST00000301873 IL2RBP14784 551 aa23.86■■□□□ 1.41
LTBP3-201ENST00000301873 FGFR1OPO95684 399 aaKnown RBP23.86■■□□□ 1.41
LTBP3-201ENST00000301873 SEPT7Q16181 437 aaKnown RBP23.86■■□□□ 1.41
LTBP3-201ENST00000301873 CCDC12Q8WUD4 166 aaPredicted RBP23.86■■□□□ 1.41
LTBP3-201ENST00000301873 TBX22Q9Y458 520 aa23.86■■□□□ 1.41
LTBP3-201ENST00000301873 PTPDC1A2A3K4 754 aa23.85■■□□□ 1.41
LTBP3-201ENST00000301873 CCDC40Q4G0X9 1142 aa23.85■■□□□ 1.41
LTBP3-201ENST00000301873 DZIP3Q86Y13 1208 aaKnown RBP23.85■■□□□ 1.41
LTBP3-201ENST00000301873 RNF113AO15541 343 aaKnown RBP23.85■■□□□ 1.41
LTBP3-201ENST00000301873 CEP135Q66GS9 1140 aa23.85■■□□□ 1.41
LTBP3-201ENST00000301873 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.85■■□□□ 1.41
LTBP3-201ENST00000301873 SPDYE4A6NLX3 237 aa23.85■■□□□ 1.41
LTBP3-201ENST00000301873 IRS4O14654 1257 aaPredicted RBP23.85■■□□□ 1.41
LTBP3-201ENST00000301873 LUZP1Q86V48 1076 aa23.85■■□□□ 1.41
LTBP3-201ENST00000301873 ZMYM3Q14202 1370 aa23.85■■□□□ 1.41
LTBP3-201ENST00000301873 RNF123Q5XPI4 1314 aa23.85■■□□□ 1.41
LTBP3-201ENST00000301873 ANKRD62A6NC57 917 aa23.85■■□□□ 1.41
LTBP3-201ENST00000301873 RUFY3Q7L099 469 aa23.85■■□□□ 1.41
LTBP3-201ENST00000301873 VPS36Q86VN1 386 aa23.85■■□□□ 1.41
LTBP3-201ENST00000301873 ORAI2Q96SN7 254 aa23.85■■□□□ 1.41
LTBP3-201ENST00000301873 KIAA0556O60303 1618 aa23.84■■□□□ 1.41
LTBP3-201ENST00000301873 TRIM47Q96LD4 638 aa23.84■■□□□ 1.41
LTBP3-201ENST00000301873 DBNDD2Q9BQY9 259 aa23.84■■□□□ 1.41
LTBP3-201ENST00000301873 HSPA2P54652 639 aa23.84■■□□□ 1.41
LTBP3-201ENST00000301873 ZFYVE9O95405 1425 aa23.84■■□□□ 1.41
LTBP3-201ENST00000301873 ZNF790Q6PG37 636 aa23.84■■□□□ 1.41
LTBP3-201ENST00000301873 SETDB2Q96T68 719 aa23.84■■□□□ 1.41
LTBP3-201ENST00000301873 CNNM2Q9H8M5 875 aa23.84■■□□□ 1.41
LTBP3-201ENST00000301873 AMPD3Q01432 767 aa23.83■■□□□ 1.41
LTBP3-201ENST00000301873 TNIP1Q15025 636 aa23.83■■□□□ 1.41
LTBP3-201ENST00000301873 CCDC129Q6ZRS4 1044 aa23.83■■□□□ 1.41
LTBP3-201ENST00000301873 F8W031 263 aaPredicted RBP23.83■■□□□ 1.41
LTBP3-201ENST00000301873 TEX14Q8IWB6 1497 aa23.83■■□□□ 1.41
LTBP3-201ENST00000301873 DDB1Q16531 1140 aa23.83■■□□□ 1.41
LTBP3-201ENST00000301873 CUL5Q93034 780 aa23.83■■□□□ 1.41
LTBP3-201ENST00000301873 RNF216Q9NWF9 866 aaPredicted RBP23.83■■□□□ 1.4
LTBP3-201ENST00000301873 RRAGBQ5VZM2 374 aa23.82■■□□□ 1.4
LTBP3-201ENST00000301873 DNAI1Q9UI46 699 aa23.82■■□□□ 1.4
LTBP3-201ENST00000301873 PPP4R3BQ5MIZ7 849 aa23.82■■□□□ 1.4
LTBP3-201ENST00000301873 KIF20AO95235 890 aa23.82■■□□□ 1.4
LTBP3-201ENST00000301873 IBSPP21815 317 aaPredicted RBP23.82■■□□□ 1.4
LTBP3-201ENST00000301873 FEZ1Q99689 392 aa23.81■■□□□ 1.4
LTBP3-201ENST00000301873 AKR1B10O60218 316 aa23.81■■□□□ 1.4
LTBP3-201ENST00000301873 TSPY3P0CV98 308 aa23.81■■□□□ 1.4
LTBP3-201ENST00000301873 TSPY8P0CW00 308 aa23.81■■□□□ 1.4
LTBP3-201ENST00000301873 NDUFB9Q9Y6M9 179 aa23.81■■□□□ 1.4
LTBP3-201ENST00000301873 MYO1BO43795 1136 aa23.81■■□□□ 1.4
LTBP3-201ENST00000301873 ZNF622Q969S3 477 aaKnown RBP eCLIP23.81■■□□□ 1.4
LTBP3-201ENST00000301873 FAM227BQ96M60 508 aa23.81■■□□□ 1.4
LTBP3-201ENST00000301873 CHMP4BP1P59074 171 aa23.81■■□□□ 1.4
LTBP3-201ENST00000301873 SHANK2Q9UPX8 1470 aa23.8■■□□□ 1.4
LTBP3-201ENST00000301873 TRIM75PA6NK02 468 aa23.8■■□□□ 1.4
LTBP3-201ENST00000301873 TRIM21P19474 475 aaKnown RBP23.8■■□□□ 1.4
LTBP3-201ENST00000301873 WDR78Q5VTH9 848 aa23.8■■□□□ 1.4
LTBP3-201ENST00000301873 DHX58Q96C10 678 aa23.8■■□□□ 1.4
LTBP3-201ENST00000301873 PRIMPOLQ96LW4 560 aa23.8■■□□□ 1.4
LTBP3-201ENST00000301873 JAG2Q9Y219 1238 aa23.8■■□□□ 1.4
LTBP3-201ENST00000301873 USP19O94966 1318 aa23.8■■□□□ 1.4
LTBP3-201ENST00000301873 USP8P40818 1118 aa23.8■■□□□ 1.4
LTBP3-201ENST00000301873 CCDC150Q8NCX0 1101 aa23.8■■□□□ 1.4
LTBP3-201ENST00000301873 CGNQ9P2M7 1197 aaKnown RBP23.8■■□□□ 1.4
LTBP3-201ENST00000301873 MACROD2A1Z1Q3 448 aa23.79■■□□□ 1.4
LTBP3-201ENST00000301873 MAGEB6Q8N7X4 407 aa23.79■■□□□ 1.4
LTBP3-201ENST00000301873 CFAP43Q8NDM7 1665 aa23.79■■□□□ 1.4
LTBP3-201ENST00000301873 A0A1B0GUL7 405 aa23.79■■□□□ 1.4
LTBP3-201ENST00000301873 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.79■■□□□ 1.41e-9■■■□□ 18.3
LTBP3-201ENST00000301873 V9GYY5 206 aaPredicted RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms