RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Kank4Q6P9J5 1016 aa18.98■□□□□ 0.63
Trim39-203ENSMUST00000113706 Mapk8ip1Q9WVI9 707 aa18.98■□□□□ 0.63
Trim39-203ENSMUST00000113706 Rnf20Q5DTM8 973 aa18.97■□□□□ 0.63
Trim39-203ENSMUST00000113706 Kcnq5Q9JK45 933 aa18.97■□□□□ 0.63
Trim39-203ENSMUST00000113706 Cyp3a57D3YYZ0 503 aa18.97■□□□□ 0.63
Trim39-203ENSMUST00000113706 St18Q80TY4 1045 aa18.97■□□□□ 0.63
Trim39-203ENSMUST00000113706 Afg3l2Q8JZQ2 802 aaKnown RBP18.97■□□□□ 0.63
Trim39-203ENSMUST00000113706 SnrkQ8VDU5 748 aa18.97■□□□□ 0.63
Trim39-203ENSMUST00000113706 Sp8Q8BMJ8 486 aa18.96■□□□□ 0.63
Trim39-203ENSMUST00000113706 Pde8bE9Q4S1 865 aa18.96■□□□□ 0.63
Trim39-203ENSMUST00000113706 Pkp1P97350 728 aaKnown RBP18.96■□□□□ 0.63
Trim39-203ENSMUST00000113706 Rtkn2Q14B46 604 aa18.96■□□□□ 0.63
Trim39-203ENSMUST00000113706 Cpa2Q504N0 417 aa18.96■□□□□ 0.63
Trim39-203ENSMUST00000113706 Zc3h12cQ5DTV4 884 aa18.96■□□□□ 0.63
Trim39-203ENSMUST00000113706 Lmbrd2Q8C561 694 aa18.96■□□□□ 0.63
Trim39-203ENSMUST00000113706 Lrrfip2Q91WK0 415 aa18.96■□□□□ 0.63
Trim39-203ENSMUST00000113706 ImpactO55091 318 aa18.96■□□□□ 0.63
Trim39-203ENSMUST00000113706 Atp1b3P97370 278 aa18.96■□□□□ 0.63
Trim39-203ENSMUST00000113706 Plekhf1Q3TB82 279 aa18.96■□□□□ 0.63
Trim39-203ENSMUST00000113706 Rbm17Q8JZX4 405 aaKnown RBP18.96■□□□□ 0.63
Trim39-203ENSMUST00000113706 Dpf1Q9QX66 387 aa18.96■□□□□ 0.63
Trim39-203ENSMUST00000113706 Hmg20bQ9Z104 317 aa18.96■□□□□ 0.63
Trim39-203ENSMUST00000113706 Cchcr1Q8K2I2 770 aa18.95■□□□□ 0.62
Trim39-203ENSMUST00000113706 Myh7Q91Z83 1935 aa18.95■□□□□ 0.62
Trim39-203ENSMUST00000113706 Sh3bp5Q9Z131 463 aa18.95■□□□□ 0.62
Trim39-203ENSMUST00000113706 Snrpa1P57784 255 aaKnown RBP18.95■□□□□ 0.62
Trim39-203ENSMUST00000113706 Plbd2Q3TCN2 594 aa18.95■□□□□ 0.62
Trim39-203ENSMUST00000113706 IncenpQ9WU62 880 aa18.95■□□□□ 0.62
Trim39-203ENSMUST00000113706 Lrrc43Q3V0L5 667 aa18.95■□□□□ 0.62
Trim39-203ENSMUST00000113706 PogkQ80TC5 607 aa18.95■□□□□ 0.62
Trim39-203ENSMUST00000113706 Ift57Q8BXG3 429 aa18.95■□□□□ 0.62
Trim39-203ENSMUST00000113706 Tceanc2Q8R2M0 207 aa18.95■□□□□ 0.62
Trim39-203ENSMUST00000113706 Zcrb1Q9CZ96 217 aaKnown RBP18.95■□□□□ 0.62
Trim39-203ENSMUST00000113706 1700006A11RikB9EHI3 544 aa18.94■□□□□ 0.62
Trim39-203ENSMUST00000113706 Fam160b2Q80YR2 744 aa18.94■□□□□ 0.62
Trim39-203ENSMUST00000113706 Sptlc3Q8BG54 563 aa18.94■□□□□ 0.62
Trim39-203ENSMUST00000113706 Plekho1Q9JIY0 408 aa18.94■□□□□ 0.62
Trim39-203ENSMUST00000113706 Psma5Q9Z2U1 241 aaKnown RBP18.94■□□□□ 0.62
Trim39-203ENSMUST00000113706 Arhgap33Q80YF9 1305 aa18.94■□□□□ 0.62
Trim39-203ENSMUST00000113706 Gm9992B2RWK3 458 aa18.94■□□□□ 0.62
Trim39-203ENSMUST00000113706 Sept1P42209 366 aa18.94■□□□□ 0.62
Trim39-203ENSMUST00000113706 Syt1P46096 421 aa18.94■□□□□ 0.62
Trim39-203ENSMUST00000113706 Unc93aQ710D3 458 aa18.94■□□□□ 0.62
Trim39-203ENSMUST00000113706 Mrpl50Q8VDT9 159 aaKnown RBP18.94■□□□□ 0.62
Trim39-203ENSMUST00000113706 Ttc14Q9CSP9 761 aa18.94■□□□□ 0.62
Trim39-203ENSMUST00000113706 Zfp804bA0A0G2JGH6 1343 aa18.93■□□□□ 0.62
Trim39-203ENSMUST00000113706 Vsig10D3YX43 558 aa18.93■□□□□ 0.62
Trim39-203ENSMUST00000113706 VeztQ3ZK22 780 aa18.93■□□□□ 0.62
Trim39-203ENSMUST00000113706 Stox1B2RQL2 990 aa18.93■□□□□ 0.62
Trim39-203ENSMUST00000113706 Gadd45bP22339 160 aa18.93■□□□□ 0.62
Trim39-203ENSMUST00000113706 Ppp4r3bQ922R5 820 aa18.93■□□□□ 0.62
Trim39-203ENSMUST00000113706 Npy5rO70342 466 aa18.93■□□□□ 0.62
Trim39-203ENSMUST00000113706 Nlrp9aQ66X03 949 aa18.93■□□□□ 0.62
Trim39-203ENSMUST00000113706 CltaO08585 235 aa18.92■□□□□ 0.62
Trim39-203ENSMUST00000113706 Map10Q8BJS7 891 aa18.92■□□□□ 0.62
Trim39-203ENSMUST00000113706 Usp44Q8C2S0 711 aa18.92■□□□□ 0.62
Trim39-203ENSMUST00000113706 Rps6kb1Q8BSK8 525 aa18.92■□□□□ 0.62
Trim39-203ENSMUST00000113706 Fbxo3Q9DC63 480 aa18.92■□□□□ 0.62
Trim39-203ENSMUST00000113706 CoblQ5NBX1 1337 aaKnown RBP18.92■□□□□ 0.62
Trim39-203ENSMUST00000113706 Trim56Q80VI1 734 aaKnown RBP18.91■□□□□ 0.62
Trim39-203ENSMUST00000113706 Plcd4Q8K3R3 807 aa18.91■□□□□ 0.62
Trim39-203ENSMUST00000113706 Scn11aQ9R053 1765 aa18.91■□□□□ 0.62
Trim39-203ENSMUST00000113706 Prl7a2O54831 253 aa18.91■□□□□ 0.62
Trim39-203ENSMUST00000113706 Hspd1P63038 573 aaKnown RBP18.9■□□□□ 0.62
Trim39-203ENSMUST00000113706 Gimap8Q75N62 688 aa18.9■□□□□ 0.62
Trim39-203ENSMUST00000113706 Srp68Q8BMA6 625 aaKnown RBP18.9■□□□□ 0.62
Trim39-203ENSMUST00000113706 HmcesQ8R1M0 353 aaKnown RBP18.9■□□□□ 0.62
Trim39-203ENSMUST00000113706 Znfx1Q8R151 1909 aaKnown RBP18.9■□□□□ 0.62
Trim39-203ENSMUST00000113706 Setdb1O88974 1307 aa18.9■□□□□ 0.62
Trim39-203ENSMUST00000113706 Ptcd1Q8C2E4 695 aaKnown RBP18.9■□□□□ 0.62
Trim39-203ENSMUST00000113706 Riok1Q922Q2 567 aa18.9■□□□□ 0.62
Trim39-203ENSMUST00000113706 SlkO54988 1233 aa18.89■□□□□ 0.61
Trim39-203ENSMUST00000113706 Prl3d1P18121 224 aa18.89■□□□□ 0.61
Trim39-203ENSMUST00000113706 AidaQ8C4Q6 305 aa18.89■□□□□ 0.61
Trim39-203ENSMUST00000113706 Phf14Q9D4H9 881 aa18.89■□□□□ 0.61
Trim39-203ENSMUST00000113706 Ube3bQ9ES34 1070 aa18.89■□□□□ 0.61
Trim39-203ENSMUST00000113706 Duox1A2AQ92 1551 aa18.89■□□□□ 0.61
Trim39-203ENSMUST00000113706 Slc39a11Q8BWY7 342 aa18.88■□□□□ 0.61
Trim39-203ENSMUST00000113706 Rassf8Q8CJ96 419 aa18.88■□□□□ 0.61
Trim39-203ENSMUST00000113706 Emilin1Q99K41 1017 aa18.88■□□□□ 0.61
Trim39-203ENSMUST00000113706 Irgm2A0A140LIF8 407 aa18.88■□□□□ 0.61
Trim39-203ENSMUST00000113706 Pde4bB1AWC9 736 aa18.88■□□□□ 0.61
Trim39-203ENSMUST00000113706 EappQ5BU09 281 aa18.88■□□□□ 0.61
Trim39-203ENSMUST00000113706 Edrf1Q6GQV7 1239 aa18.88■□□□□ 0.61
Trim39-203ENSMUST00000113706 Cypt2Q6P924 180 aa18.88■□□□□ 0.61
Trim39-203ENSMUST00000113706 Tktl2Q9D4D4 627 aa18.88■□□□□ 0.61
Trim39-203ENSMUST00000113706 Speer4dL7N216 212 aa18.87■□□□□ 0.61
Trim39-203ENSMUST00000113706 Gm4340L7N2C4 268 aa18.87■□□□□ 0.61
Trim39-203ENSMUST00000113706 Znf692Q3U381 531 aa18.87■□□□□ 0.61
Trim39-203ENSMUST00000113706 Foxo3Q9WVH4 672 aa18.87■□□□□ 0.61
Trim39-203ENSMUST00000113706 Fbxl16A2RT62 479 aa18.87■□□□□ 0.61
Trim39-203ENSMUST00000113706 Ubap1lG3UW59 384 aa18.87■□□□□ 0.61
Trim39-203ENSMUST00000113706 Tmem143Q8VD26 458 aa18.87■□□□□ 0.61
Trim39-203ENSMUST00000113706 Smc3Q9CW03 1217 aaKnown RBP18.87■□□□□ 0.61
Trim39-203ENSMUST00000113706 Appbp2Q9DAX9 585 aa18.87■□□□□ 0.61
Trim39-203ENSMUST00000113706 Popdc2Q9ES82 367 aa18.87■□□□□ 0.61
Trim39-203ENSMUST00000113706 1700029H14RikE9PY36 240 aa18.86■□□□□ 0.61
Trim39-203ENSMUST00000113706 Znf496Q5SXI5 585 aa18.86■□□□□ 0.61
Trim39-203ENSMUST00000113706 Il17raQ60943 864 aa18.86■□□□□ 0.61
Trim39-203ENSMUST00000113706 Dbndd1Q9CZ00 160 aa18.86■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms