RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 MthfsQ9D110 203 aa14.09□□□□□ -0.15
Ssh1-202ENSMUST00000112298 Smarcad1Q04692 1021 aa14.09□□□□□ -0.15
Ssh1-202ENSMUST00000112298 Zc3h12cQ5DTV4 884 aa14.09□□□□□ -0.15
Ssh1-202ENSMUST00000112298 Tubb2aQ7TMM9 445 aa14.09□□□□□ -0.15
Ssh1-202ENSMUST00000112298 Sec62Q8BU14 398 aaKnown RBP14.09□□□□□ -0.15
Ssh1-202ENSMUST00000112298 SltmQ8CH25 1031 aaKnown RBP14.09□□□□□ -0.15
Ssh1-202ENSMUST00000112298 FanclQ9CR14 375 aa14.09□□□□□ -0.15
Ssh1-202ENSMUST00000112298 Tubb2bQ9CWF2 445 aa14.09□□□□□ -0.15
Ssh1-202ENSMUST00000112298 Chd1lQ9CXF7 900 aa14.09□□□□□ -0.15
Ssh1-202ENSMUST00000112298 Gm28510A0A087WP28 240 aa14.09□□□□□ -0.15
Ssh1-202ENSMUST00000112298 Aldh1l2Q8K009 923 aa14.09□□□□□ -0.15
Ssh1-202ENSMUST00000112298 Gbp7Q91Z40 638 aa14.09□□□□□ -0.15
Ssh1-202ENSMUST00000112298 Ccdc6D3YZP9 469 aa14.09□□□□□ -0.15
Ssh1-202ENSMUST00000112298 Zfp213E9QAW0 468 aa14.09□□□□□ -0.15
Ssh1-202ENSMUST00000112298 Dmrt2Q8BG36 561 aa14.09□□□□□ -0.15
Ssh1-202ENSMUST00000112298 Nek11Q8C0Q4 628 aa14.09□□□□□ -0.15
Ssh1-202ENSMUST00000112298 BrapQ99MP8 591 aa14.09□□□□□ -0.15
Ssh1-202ENSMUST00000112298 Grm8P47743 908 aa14.08□□□□□ -0.15
Ssh1-202ENSMUST00000112298 Cyp4f39Q8BGU0 532 aa14.08□□□□□ -0.15
Ssh1-202ENSMUST00000112298 Ano1Q8BHY3 960 aa14.08□□□□□ -0.15
Ssh1-202ENSMUST00000112298 Ubxn1Q922Y1 297 aa14.08□□□□□ -0.15
Ssh1-202ENSMUST00000112298 Amotl1Q9D4H4 968 aa14.08□□□□□ -0.15
Ssh1-202ENSMUST00000112298 Efhd1Q9D4J1 240 aa14.08□□□□□ -0.15
Ssh1-202ENSMUST00000112298 Rbm19Q8R3C6 952 aaKnown RBP14.08□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Nek5Q7TSC3 627 aa14.08□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Mxra7Q9CZH7 178 aa14.08□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Esyt1Q3U7R1 1092 aaKnown RBP14.08□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Arhgef6Q8K4I3 771 aa14.08□□□□□ -0.16
Ssh1-202ENSMUST00000112298 TrdnE9Q9K5 693 aa14.07□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Nap1l4Q78ZA7 375 aaKnown RBP14.07□□□□□ -0.16
Ssh1-202ENSMUST00000112298 4921530L21RikQ9CQ47 274 aa14.07□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Aplp1Q03157 653 aa14.07□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Frmpd1A2AKB4 1549 aa14.07□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Dnajc5bQ9CQ94 199 aa14.07□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Ccdc91Q9D8L5 442 aa14.07□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Mcm10Q0VBD2 885 aa14.07□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Xrcc4Q924T3 326 aa14.07□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Rufy3Q9D394 469 aa14.07□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Maip1Q8BHE8 291 aa14.07□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Apol7cQ8C6E1 369 aa14.07□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Paip2Q9D6V8 124 aa14.07□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Top2bQ64511 1612 aa14.06□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Myo1bP46735 1107 aa14.06□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Nucb1Q02819 459 aaKnown RBP14.06□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Specc1lQ2KN98 1118 aaKnown RBP14.06□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Ctdp1Q7TSG2 960 aa14.06□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Rtn1Q8K0T0 780 aa14.06□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Zbtb3Q91X45 518 aa14.06□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Tldc2A2ACG1 198 aa14.06□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Atp2a2O55143 1044 aaKnown RBP14.06□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Igbp1Q61249 340 aa14.06□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Sdad1Q80UZ2 687 aaKnown RBP14.06□□□□□ -0.16
Ssh1-202ENSMUST00000112298 St5Q924W7 1134 aa14.06□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Lmbr1lQ9D1E5 489 aa14.06□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Ccdc129Q14B48 1034 aa14.06□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Larp6Q8BN59 492 aa14.06□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Gpr161B2RPY5 545 aa14.06□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Zfp397Q7TNK4 527 aa14.06□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Nip7Q9CXK8 180 aaKnown RBP14.06□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Mkrn1Q9QXP6 481 aa14.06□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Atp2b1G5E829 1220 aa14.05□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Psmd1Q3TXS7 953 aa14.05□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Calcoco1Q8CGU1 691 aa14.05□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Dydc2Q9D3X8 139 aa14.05□□□□□ -0.16
Ssh1-202ENSMUST00000112298 SsbP32067 415 aaKnown RBP14.05□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Efcab2Q9CQ46 164 aa14.05□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Senp1P59110 640 aa14.05□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Ddx27Q921N6 760 aaKnown RBP14.05□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Tnip1Q9WUU8 647 aa14.05□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Tcerg1lQ3B807 590 aa14.05□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Map3k9Q3U1V8 1077 aa14.05□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Catsper2A2ARP9 588 aa14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Apol10bG3X9K7 334 aa14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Snx25Q3ZT31 840 aa14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Pym1Q8CHP5 203 aaKnown RBP14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Dph6Q9CQ28 267 aa14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Fam213aQ9CYH2 218 aa14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Camk4P08414 469 aa14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Ripply1Q2WG77 201 aa14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Prim1P20664 417 aa14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Gm1993A6X8I0 212 aa14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 SlxD3Z347 212 aa14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Gna11P21278 359 aa14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 TchpQ3TVW5 497 aa14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Smarcc2Q6PDG5 1213 aa14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Fam204aQ8C6C7 236 aa14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 GckrQ91X44 587 aa14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Mrpl12Q9DB15 201 aaKnown RBP14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Tacc3Q9JJ11 631 aa14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Ccdc114Q3UX62 658 aa14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Lrrc43Q3V0L5 667 aa14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Gucy1a3Q9ERL9 691 aa14.04□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Eif4g1Q6NZJ6 1600 aaKnown RBP14.03□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Haus1Q8BHX1 278 aa14.03□□□□□ -0.16
Ssh1-202ENSMUST00000112298 ZfxP17012 799 aa14.03□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Depdc1bQ8BH88 529 aa14.03□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Slc5a4bQ91ZP4 660 aa14.03□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Ak2Q9WTP6 239 aa14.03□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Svs3aF2Z472 265 aa14.03□□□□□ -0.16
Ssh1-202ENSMUST00000112298 Epb41l2O70318 988 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 63.9 ms