RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Cntnap1O54991 1385 aa17.8■□□□□ 0.44
Trim11-203ENSMUST00000108810 InhbeO08717 350 aa17.8■□□□□ 0.44
Trim11-203ENSMUST00000108810 Map10Q8BJS7 891 aa17.8■□□□□ 0.44
Trim11-203ENSMUST00000108810 Ift57Q8BXG3 429 aa17.8■□□□□ 0.44
Trim11-203ENSMUST00000108810 Lmbrd2Q8C561 694 aa17.8■□□□□ 0.44
Trim11-203ENSMUST00000108810 Ppp4r3bQ922R5 820 aa17.8■□□□□ 0.44
Trim11-203ENSMUST00000108810 Bicdl1A0JNT9 577 aa17.8■□□□□ 0.44
Trim11-203ENSMUST00000108810 Pde8bE9Q4S1 865 aa17.8■□□□□ 0.44
Trim11-203ENSMUST00000108810 Cyp2c23E9Q5K4 494 aa17.8■□□□□ 0.44
Trim11-203ENSMUST00000108810 Rtkn2Q14B46 604 aa17.8■□□□□ 0.44
Trim11-203ENSMUST00000108810 Ifit1bl2Q3U687 466 aa17.8■□□□□ 0.44
Trim11-203ENSMUST00000108810 PogkQ80TC5 607 aa17.8■□□□□ 0.44
Trim11-203ENSMUST00000108810 Fbxo3Q9DC63 480 aa17.8■□□□□ 0.44
Trim11-203ENSMUST00000108810 Sema6bO54951 886 aa17.79■□□□□ 0.44
Trim11-203ENSMUST00000108810 Plbd2Q3TCN2 594 aa17.79■□□□□ 0.44
Trim11-203ENSMUST00000108810 Fam160b2Q80YR2 744 aa17.79■□□□□ 0.44
Trim11-203ENSMUST00000108810 Dpf1Q9QX66 387 aa17.79■□□□□ 0.44
Trim11-203ENSMUST00000108810 Eef2kO08796 724 aa17.78■□□□□ 0.44
Trim11-203ENSMUST00000108810 Sept1P42209 366 aa17.78■□□□□ 0.44
Trim11-203ENSMUST00000108810 Prl7a2O54831 253 aa17.78■□□□□ 0.44
Trim11-203ENSMUST00000108810 Hspd1P63038 573 aaKnown RBP17.78■□□□□ 0.44
Trim11-203ENSMUST00000108810 Znf692Q3U381 531 aa17.78■□□□□ 0.44
Trim11-203ENSMUST00000108810 Trim56Q80VI1 734 aaKnown RBP17.78■□□□□ 0.44
Trim11-203ENSMUST00000108810 Sptlc3Q8BG54 563 aa17.78■□□□□ 0.44
Trim11-203ENSMUST00000108810 Tmx3Q8BXZ1 456 aa17.78■□□□□ 0.44
Trim11-203ENSMUST00000108810 MypopQ8R4U1 393 aa17.78■□□□□ 0.44
Trim11-203ENSMUST00000108810 Gripap1Q8VD04 806 aa17.78■□□□□ 0.44
Trim11-203ENSMUST00000108810 IncenpQ9WU62 880 aa17.78■□□□□ 0.44
Trim11-203ENSMUST00000108810 Col3a1P08121 1464 aa17.78■□□□□ 0.44
Trim11-203ENSMUST00000108810 ImpactO55091 318 aa17.77■□□□□ 0.44
Trim11-203ENSMUST00000108810 Smc3Q9CW03 1217 aaKnown RBP17.77■□□□□ 0.44
Trim11-203ENSMUST00000108810 Smarcc1P97496 1104 aa17.77■□□□□ 0.43
Trim11-203ENSMUST00000108810 Il17raQ60943 864 aa17.77■□□□□ 0.43
Trim11-203ENSMUST00000108810 Gm13023A2A8N2 498 aa17.76■□□□□ 0.43
Trim11-203ENSMUST00000108810 Snrpa1P57784 255 aaKnown RBP17.76■□□□□ 0.43
Trim11-203ENSMUST00000108810 Nlrp9aQ66X03 949 aa17.76■□□□□ 0.43
Trim11-203ENSMUST00000108810 Ttc14Q9CSP9 761 aa17.76■□□□□ 0.43
Trim11-203ENSMUST00000108810 Sh3bp5Q9Z131 463 aa17.76■□□□□ 0.43
Trim11-203ENSMUST00000108810 Znfx1Q8R151 1909 aaKnown RBP17.76■□□□□ 0.43
Trim11-203ENSMUST00000108810 Setdb1O88974 1307 aa17.76■□□□□ 0.43
Trim11-203ENSMUST00000108810 Plcd4Q8K3R3 807 aa17.76■□□□□ 0.43
Trim11-203ENSMUST00000108810 NgdnQ9DB96 315 aaKnown RBP17.76■□□□□ 0.43
Trim11-203ENSMUST00000108810 Plekho1Q9JIY0 408 aa17.76■□□□□ 0.43
Trim11-203ENSMUST00000108810 Stx6Q9JKK1 255 aa17.76■□□□□ 0.43
Trim11-203ENSMUST00000108810 Duox1A2AQ92 1551 aa17.75■□□□□ 0.43
Trim11-203ENSMUST00000108810 Irgm2A0A140LIF8 407 aa17.75■□□□□ 0.43
Trim11-203ENSMUST00000108810 Npy5rO70342 466 aa17.75■□□□□ 0.43
Trim11-203ENSMUST00000108810 Edrf1Q6GQV7 1239 aa17.75■□□□□ 0.43
Trim11-203ENSMUST00000108810 Bms1Q6PGF5 1284 aaKnown RBP17.75■□□□□ 0.43
Trim11-203ENSMUST00000108810 Kiaa0319lQ8K135 1048 aa17.75■□□□□ 0.43
Trim11-203ENSMUST00000108810 Ube3bQ9ES34 1070 aa17.75■□□□□ 0.43
Trim11-203ENSMUST00000108810 4930523C07RikE9Q2T4 99 aa17.75■□□□□ 0.43
Trim11-203ENSMUST00000108810 Isy1Q69ZQ2 285 aaKnown RBP17.75■□□□□ 0.43
Trim11-203ENSMUST00000108810 AidaQ8C4Q6 305 aa17.75■□□□□ 0.43
Trim11-203ENSMUST00000108810 Prl3d1P18121 224 aa17.74■□□□□ 0.43
Trim11-203ENSMUST00000108810 Gadd45bP22339 160 aa17.74■□□□□ 0.43
Trim11-203ENSMUST00000108810 Shisa4Q8CA71 197 aa17.74■□□□□ 0.43
Trim11-203ENSMUST00000108810 DpydQ8CHR6 1025 aa17.74■□□□□ 0.43
Trim11-203ENSMUST00000108810 Riok1Q922Q2 567 aa17.74■□□□□ 0.43
Trim11-203ENSMUST00000108810 FanccP50652 591 aa17.73■□□□□ 0.43
Trim11-203ENSMUST00000108810 4933402E13RikQ9D4D2 429 aa17.73■□□□□ 0.43
Trim11-203ENSMUST00000108810 Appbp2Q9DAX9 585 aa17.73■□□□□ 0.43
Trim11-203ENSMUST00000108810 Carmil3Q3UFQ8 1375 aa17.73■□□□□ 0.43
Trim11-203ENSMUST00000108810 Usp42B2RQC2 1324 aaKnown RBP17.73■□□□□ 0.43
Trim11-203ENSMUST00000108810 Zc3h12cQ5DTV4 884 aa17.73■□□□□ 0.43
Trim11-203ENSMUST00000108810 Tsr2Q8C8T8 191 aa17.73■□□□□ 0.43
Trim11-203ENSMUST00000108810 Afg3l2Q8JZQ2 802 aaKnown RBP17.73■□□□□ 0.43
Trim11-203ENSMUST00000108810 Emilin1Q99K41 1017 aa17.73■□□□□ 0.43
Trim11-203ENSMUST00000108810 Mapk8ip1Q9WVI9 707 aa17.73■□□□□ 0.43
Trim11-203ENSMUST00000108810 Aox1O54754 1333 aa17.73■□□□□ 0.43
Trim11-203ENSMUST00000108810 Atp1b3P97370 278 aa17.72■□□□□ 0.43
Trim11-203ENSMUST00000108810 Ctdnep1Q3TP92 244 aa17.72■□□□□ 0.43
Trim11-203ENSMUST00000108810 Ccdc158Q8CDI6 1109 aa17.72■□□□□ 0.43
Trim11-203ENSMUST00000108810 Ccar2Q8VDP4 922 aaKnown RBP17.72■□□□□ 0.43
Trim11-203ENSMUST00000108810 Myh3P13541 1940 aa17.72■□□□□ 0.43
Trim11-203ENSMUST00000108810 Sik3Q6P4S6 1311 aa17.72■□□□□ 0.43
Trim11-203ENSMUST00000108810 Gm4340L7N2C4 268 aa17.72■□□□□ 0.43
Trim11-203ENSMUST00000108810 Lrit1Q8K099 624 aa17.72■□□□□ 0.43
Trim11-203ENSMUST00000108810 CoblQ5NBX1 1337 aaKnown RBP17.71■□□□□ 0.43
Trim11-203ENSMUST00000108810 Gm9992B2RWK3 458 aa17.71■□□□□ 0.43
Trim11-203ENSMUST00000108810 Ppfibp2O35711 882 aa17.71■□□□□ 0.43
Trim11-203ENSMUST00000108810 Lrrc43Q3V0L5 667 aa17.71■□□□□ 0.43
Trim11-203ENSMUST00000108810 Unc93aQ710D3 458 aa17.71■□□□□ 0.43
Trim11-203ENSMUST00000108810 Tubb6Q922F4 447 aa17.71■□□□□ 0.43
Trim11-203ENSMUST00000108810 Nup98Q6PFD9 1816 aaKnown RBP17.71■□□□□ 0.43
Trim11-203ENSMUST00000108810 Cyp2d9P11714 504 aa17.71■□□□□ 0.43
Trim11-203ENSMUST00000108810 Exosc10P56960 887 aaKnown RBP17.71■□□□□ 0.43
Trim11-203ENSMUST00000108810 Ppp1r10Q80W00 888 aaKnown RBP17.71■□□□□ 0.43
Trim11-203ENSMUST00000108810 Nol12Q8BG17 217 aa17.71■□□□□ 0.43
Trim11-203ENSMUST00000108810 Stox1B2RQL2 990 aa17.7■□□□□ 0.42
Trim11-203ENSMUST00000108810 Speer4dL7N216 212 aa17.7■□□□□ 0.42
Trim11-203ENSMUST00000108810 Cyp2d34L7N463 504 aa17.7■□□□□ 0.42
Trim11-203ENSMUST00000108810 Il4rP16382 810 aa17.7■□□□□ 0.42
Trim11-203ENSMUST00000108810 Wdr93Q402B2 695 aa17.7■□□□□ 0.42
Trim11-203ENSMUST00000108810 Nyap1Q6PFX7 833 aa17.7■□□□□ 0.42
Trim11-203ENSMUST00000108810 Abtb2Q7TQI7 1024 aa17.7■□□□□ 0.42
Trim11-203ENSMUST00000108810 Slc39a11Q8BWY7 342 aa17.7■□□□□ 0.42
Trim11-203ENSMUST00000108810 Rassf8Q8CJ96 419 aa17.7■□□□□ 0.42
Trim11-203ENSMUST00000108810 Sept12Q9D451 317 aa17.7■□□□□ 0.42
Trim11-203ENSMUST00000108810 Taok3Q8BYC6 898 aa17.7■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms