RNA–Protein interactions for RNA: ENSMUST00000016399.5

Tubb1-201, Transcript of Tubulin beta-1 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tubb1, Length 1,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1-201ENSMUST00000016399 Greb1lB9EJV3 1913 aa13.55□□□□□ -0.24
Tubb1-201ENSMUST00000016399 NeflP08551 543 aa13.55□□□□□ -0.24
Tubb1-201ENSMUST00000016399 NfixP70257 488 aa13.55□□□□□ -0.24
Tubb1-201ENSMUST00000016399 Atp8b2P98199 1209 aa13.55□□□□□ -0.24
Tubb1-201ENSMUST00000016399 GpkowQ56A08 488 aa13.55□□□□□ -0.24
Tubb1-201ENSMUST00000016399 Duxf3A0A0N4SV92 674 aa13.54□□□□□ -0.24
Tubb1-201ENSMUST00000016399 Triml2E9PW10 424 aa13.54□□□□□ -0.24
Tubb1-201ENSMUST00000016399 Q3UJP5 209 aa13.54□□□□□ -0.24
Tubb1-201ENSMUST00000016399 Nol10Q5RJG1 687 aaKnown RBP13.54□□□□□ -0.24
Tubb1-201ENSMUST00000016399 BcanQ61361 883 aa13.54□□□□□ -0.24
Tubb1-201ENSMUST00000016399 Tgfb1i1Q62219 461 aa13.54□□□□□ -0.24
Tubb1-201ENSMUST00000016399 Znf609Q8BZ47 1413 aa13.54□□□□□ -0.24
Tubb1-201ENSMUST00000016399 Sirt2Q8VDQ8 389 aa13.54□□□□□ -0.24
Tubb1-201ENSMUST00000016399 Telo2Q9DC40 840 aaKnown RBP13.54□□□□□ -0.24
Tubb1-201ENSMUST00000016399 Myh1Q5SX40 1942 aa13.54□□□□□ -0.24
Tubb1-201ENSMUST00000016399 Arrdc4A0A0B4J1F4 415 aa13.53□□□□□ -0.24
Tubb1-201ENSMUST00000016399 Prl3d2F6R3P9 224 aa13.53□□□□□ -0.24
Tubb1-201ENSMUST00000016399 Psmd14O35593 310 aa13.53□□□□□ -0.24
Tubb1-201ENSMUST00000016399 Tmem67Q8BR76 992 aa13.53□□□□□ -0.24
Tubb1-201ENSMUST00000016399 Ascc2Q91WR3 749 aa13.53□□□□□ -0.24
Tubb1-201ENSMUST00000016399 Prg3Q9JL95 222 aa13.53□□□□□ -0.24
Tubb1-201ENSMUST00000016399 Ier5O89113 308 aa13.52□□□□□ -0.25
Tubb1-201ENSMUST00000016399 NyxP83503 476 aa13.52□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Sde2Q8K1J5 448 aaKnown RBP13.52□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Shtn1Q8K2Q9 631 aa13.52□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Sart3Q9JLI8 962 aaKnown RBP13.52□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Col1a1P11087 1453 aa13.52□□□□□ -0.25
Tubb1-201ENSMUST00000016399 4931408C20RikE9PWP9 1381 aa13.52□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Vsig10D3YX43 558 aa13.51□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Oas2E9Q9A9 742 aa13.51□□□□□ -0.25
Tubb1-201ENSMUST00000016399 VgfQ0VGU4 617 aa13.51□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Itga6Q61739 1091 aa13.51□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Cog5Q8C0L8 829 aa13.51□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Myo3bQ1EG27 1305 aa13.51□□□□□ -0.25
Tubb1-201ENSMUST00000016399 AfdnQ9QZQ1 1820 aaKnown RBP13.51□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Scn11aQ9R053 1765 aa13.5□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Sox10Q04888 466 aa13.5□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Cwc27Q3TKY6 469 aa13.5□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Adora1Q60612 326 aa13.5□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Tmem87bQ8BKU8 555 aa13.5□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Plcd4Q8K3R3 807 aa13.5□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Ppp1r42Q8R1Z4 357 aa13.5□□□□□ -0.25
Tubb1-201ENSMUST00000016399 HnrnpuQ8VEK3 800 aaKnown RBP13.5□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Htra3Q9D236 459 aa13.5□□□□□ -0.25
Tubb1-201ENSMUST00000016399 UvssaQ9D479 717 aa13.5□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Popdc2Q9ES82 367 aa13.5□□□□□ -0.25
Tubb1-201ENSMUST00000016399 NynrinQ5DTZ0 1840 aa13.5□□□□□ -0.25
Tubb1-201ENSMUST00000016399 LeprP48356 1162 aa13.49□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Snrpa1P57784 255 aaKnown RBP13.49□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Srgap3Q812A2 1099 aa13.49□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Kif2cQ922S8 721 aa13.49□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Rtn4Q99P72 1162 aaKnown RBP13.49□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Adarb2Q9JI20 745 aa13.49□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Kcnq5Q9JK45 933 aa13.49□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Mical3Q8CJ19 1993 aa13.49□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Ube4aE9Q735 1028 aa13.48□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Itgb7P26011 806 aa13.48□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Abhd15Q5F2F2 459 aa13.48□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Slc38a10Q5I012 1090 aa13.48□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Fam13aQ8BGI4 693 aa13.48□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Tor1aip2Q8BYU6 502 aa13.48□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Snap47Q8R570 413 aa13.48□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Dydc2Q9D3X8 139 aa13.48□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Kiaa0232Q80U59 1396 aaKnown RBP13.48□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Prl3d3A0A0M6L0J6 224 aa13.47□□□□□ -0.25
Tubb1-201ENSMUST00000016399 D1Pas1P16381 660 aa13.47□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Znf697Q569E7 569 aa13.47□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Slc4a10Q5DTL9 1118 aa13.47□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Rbm27Q5SFM8 1060 aaKnown RBP13.47□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Prkrip1Q9CWV6 186 aaKnown RBP13.47□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Skint7A7XV04 395 aa13.47□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Rps8P62242 208 aaKnown RBP13.47□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Rps12P63323 132 aaKnown RBP13.47□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Traf5P70191 558 aa13.47□□□□□ -0.25
Tubb1-201ENSMUST00000016399 VeztQ3ZK22 780 aa13.47□□□□□ -0.25
Tubb1-201ENSMUST00000016399 HlfQ8BW74 295 aa13.47□□□□□ -0.25
Tubb1-201ENSMUST00000016399 Heg1E9Q7X6 1337 aa13.46□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Mmp8O70138 465 aa13.46□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Map2k1P31938 393 aa13.46□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Ddx46Q569Z5 1032 aaKnown RBP13.46□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Pdzrn3Q69ZS0 1063 aa13.46□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Q8C5K5 320 aa13.46□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Rnf181Q9CY62 165 aa13.46□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Arih1Q9Z1K5 555 aa13.46□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Lgr5Q9Z1P4 907 aa13.46□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Map3k15A2AQW0 1331 aa13.45□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Usp17ldG5E8G2 545 aa13.45□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Usp17lcG5E8I7 545 aa13.45□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Calr4Q3TQS0 420 aa13.45□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Ttll12Q3UDE2 639 aa13.45□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Pxylp1Q8BHA9 480 aa13.45□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Naa16Q9DBB4 864 aa13.45□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Plekho1Q9JIY0 408 aa13.45□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Nphp1Q9QY53 687 aa13.45□□□□□ -0.26
Tubb1-201ENSMUST00000016399 1700029H14RikE9PY36 240 aa13.44□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Eya2O08575 532 aa13.44□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Sult6b1P0CC03 303 aa13.44□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Gpr182P43142 395 aa13.44□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Pa2g4P50580 394 aaKnown RBP13.44□□□□□ -0.26
Tubb1-201ENSMUST00000016399 Jarid2Q62315 1234 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 56.6 ms