RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPN1	YPR133C	KIN82	P25341	720 aa		4.93	□□□□□ -1.62
SPN1	YPR133C	RPL8B	P29453	256 aa	Known RBP	4.93	□□□□□ -1.62
SPN1	YPR133C	ANP1	P32629	500 aa		4.93	□□□□□ -1.62
SPN1	YPR133C	SFA1	P32771	386 aa		4.93	□□□□□ -1.62
SPN1	YPR133C	PAN5	P38787	379 aa		4.93	□□□□□ -1.62
SPN1	YPR133C	NMD2	P38798	1089 aa	Known RBP	4.93	□□□□□ -1.62
SPN1	YPR133C	NNF1	P47149	201 aa		4.93	□□□□□ -1.62
SPN1	YPR133C	FMS1	P50264	508 aa		4.93	□□□□□ -1.62
SPN1	YPR133C	LSB1	P53281	241 aa		4.93	□□□□□ -1.62
SPN1	YPR133C	MRPS35	P53292	345 aa		4.93	□□□□□ -1.62
SPN1	YPR133C	YNR065C	P53751	1116 aa		4.93	□□□□□ -1.62
SPN1	YPR133C	FAR11	P53917	953 aa		4.93	□□□□□ -1.62
SPN1	YPR133C	GPI13	Q07830	1017 aa		4.93	□□□□□ -1.62
SPN1	YPR133C	WHI5	Q12416	295 aa		4.93	□□□□□ -1.62
SPN1	YPR133C	MSD1	P15179	658 aa	Known RBP	4.92	□□□□□ -1.62
SPN1	YPR133C	SAC7	P17121	654 aa		4.92	□□□□□ -1.62
SPN1	YPR133C	SRP54	P20424	541 aa	Known RBP	4.92	□□□□□ -1.62
SPN1	YPR133C	OPI1	P21957	404 aa		4.92	□□□□□ -1.62
SPN1	YPR133C	SMY2	P32909	740 aa	Known RBP	4.92	□□□□□ -1.62
SPN1	YPR133C	YHL008C	P38750	627 aa		4.92	□□□□□ -1.62
SPN1	YPR133C	NEO1	P40527	1151 aa		4.92	□□□□□ -1.62
SPN1	YPR133C	OPT1	P40897	799 aa		4.92	□□□□□ -1.62
SPN1	YPR133C	HUL4	P40985	892 aa		4.92	□□□□□ -1.62
SPN1	YPR133C	DSE4	P53753	1117 aa		4.92	□□□□□ -1.62
SPN1	YPR133C	RPT6	Q01939	405 aa	Known RBP	4.92	□□□□□ -1.62
SPN1	YPR133C	PNG1	Q02890	363 aa		4.92	□□□□□ -1.62
SPN1	YPR133C	MSH6	Q03834	1242 aa		4.92	□□□□□ -1.62
SPN1	YPR133C	LCD1	Q04377	747 aa		4.92	□□□□□ -1.62
SPN1	YPR133C	CLF1	Q12309	687 aa	Predicted RBP	4.92	□□□□□ -1.62
SPN1	YPR133C	GLT1	Q12680	2145 aa	Known RBP	4.91	□□□□□ -1.62
SPN1	YPR133C	FMP27	Q06179	2628 aa		4.91	□□□□□ -1.62
SPN1	YPR133C	FLP1	P03870	423 aa		4.91	□□□□□ -1.62
SPN1	YPR133C	PPZ1	P26570	692 aa		4.91	□□□□□ -1.62
SPN1	YPR133C	UGA4	P32837	571 aa		4.91	□□□□□ -1.62
SPN1	YPR133C	SAM37	P50110	327 aa		4.91	□□□□□ -1.62
SPN1	YPR133C	HDA1	P53973	706 aa		4.91	□□□□□ -1.62
SPN1	YPR133C	SPO71	Q03868	1245 aa		4.91	□□□□□ -1.62
SPN1	YPR133C	MAG2	Q06436	670 aa	Known RBP	4.91	□□□□□ -1.62
SPN1	YPR133C	BRE1	Q07457	700 aa	Known RBP	4.91	□□□□□ -1.62
SPN1	YPR133C	SEN1	Q00416	2231 aa	Known RBP	4.91	□□□□□ -1.62
SPN1	YPR133C	PRC1	P00729	532 aa		4.9	□□□□□ -1.63
SPN1	YPR133C	MBR1	P23493	339 aa		4.9	□□□□□ -1.63
SPN1	YPR133C	SLX1	P38324	304 aa		4.9	□□□□□ -1.63
SPN1	YPR133C	FAF1	P40546	346 aa	Predicted RBP	4.9	□□□□□ -1.63
SPN1	YPR133C	HAS1	Q03532	505 aa	Known RBP	4.9	□□□□□ -1.63
SPN1	YPR133C	MYO5	Q04439	1219 aa	Known RBP	4.9	□□□□□ -1.63
SPN1	YPR133C	MMR1	Q06324	491 aa		4.9	□□□□□ -1.63
SPN1	YPR133C	NOC3	Q07896	663 aa	Predicted RBP	4.9	□□□□□ -1.63
SPN1	YPR133C	TY1A-NL1	Q12391	440 aa	Known RBP	4.9	□□□□□ -1.63
SPN1	YPR133C	MAK31	P23059	88 aa		4.89	□□□□□ -1.63
SPN1	YPR133C	MSS51	P32335	436 aa		4.89	□□□□□ -1.63
SPN1	YPR133C	RIM11	P38615	370 aa		4.89	□□□□□ -1.63
SPN1	YPR133C	CIC1	P38779	376 aa	Known RBP	4.89	□□□□□ -1.63
SPN1	YPR133C	ARI1	P53111	347 aa	Known RBP	4.89	□□□□□ -1.63
SPN1	YPR133C	MDM1	Q01846	1127 aa		4.89	□□□□□ -1.63
SPN1	YPR133C	IRC10	Q08118	586 aa		4.89	□□□□□ -1.63
SPN1	YPR133C	CMR1	Q12510	522 aa	Known RBP	4.89	□□□□□ -1.63
SPN1	YPR133C	NPR1	P22211	790 aa		4.88	□□□□□ -1.63
SPN1	YPR133C	RSC6	P25632	483 aa		4.88	□□□□□ -1.63
SPN1	YPR133C	RME1	P32338	300 aa	Known RBP	4.88	□□□□□ -1.63
SPN1	YPR133C	MAE1	P36013	669 aa	Known RBP	4.88	□□□□□ -1.63
SPN1	YPR133C	DRE2	P36152	348 aa		4.88	□□□□□ -1.63
SPN1	YPR133C	TVP38	P36164	337 aa		4.88	□□□□□ -1.63
SPN1	YPR133C	HMF1	P40037	129 aa	Known RBP	4.88	□□□□□ -1.63
SPN1	YPR133C	YTA12	P40341	825 aa		4.88	□□□□□ -1.63
SPN1	YPR133C	CSM2	P40465	213 aa		4.88	□□□□□ -1.63
SPN1	YPR133C	SAD1	P43589	448 aa		4.88	□□□□□ -1.63
SPN1	YPR133C	YJL045W	P47052	634 aa		4.88	□□□□□ -1.63
SPN1	YPR133C	PSP2	P50109	593 aa	Known RBP	4.88	□□□□□ -1.63
SPN1	YPR133C	NUT1	P53114	1132 aa		4.88	□□□□□ -1.63
SPN1	YPR133C	OYE2	Q03558	400 aa	Known RBP	4.88	□□□□□ -1.63
SPN1	YPR133C	YLR455W	Q06188	304 aa		4.88	□□□□□ -1.63
SPN1	YPR133C	PIG1	Q06216	648 aa		4.88	□□□□□ -1.63
SPN1	YPR133C	PMT7	Q06644	662 aa		4.88	□□□□□ -1.63
SPN1	YPR133C	VIP1	Q06685	1146 aa	Known RBP	4.88	□□□□□ -1.63
SPN1	YPR133C	ELG1	Q12050	791 aa		4.88	□□□□□ -1.63
SPN1	YPR133C	SSF2	Q12153	453 aa	Predicted RBP	4.88	□□□□□ -1.63
SPN1	YPR133C	LAA1	P39526	2014 aa		4.88	□□□□□ -1.63
SPN1	YPR133C	CAN1	P04817	590 aa		4.87	□□□□□ -1.63
SPN1	YPR133C	CDC16	P09798	840 aa		4.87	□□□□□ -1.63
SPN1	YPR133C	RPL8A	P17076	256 aa	Known RBP	4.87	□□□□□ -1.63
SPN1	YPR133C	UBC1	P21734	215 aa	Known RBP	4.87	□□□□□ -1.63
SPN1	YPR133C	IMG2	P25642	146 aa	Predicted RBP	4.87	□□□□□ -1.63
SPN1	YPR133C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
SPN1	YPR133C	APN2	P38207	520 aa		4.87	□□□□□ -1.63
SPN1	YPR133C	RFS1	P38234	210 aa	Known RBP	4.87	□□□□□ -1.63
SPN1	YPR133C	BUD16	P39988	312 aa		4.87	□□□□□ -1.63
SPN1	YPR133C	YFL052W	P43551	465 aa		4.87	□□□□□ -1.63
SPN1	YPR133C	MUK1	Q02866	612 aa		4.87	□□□□□ -1.63
SPN1	YPR133C	ECM16	Q04217	1267 aa	Known RBP	4.87	□□□□□ -1.63
SPN1	YPR133C	SPN1	Q06505	410 aa	Predicted RBP	4.87	□□□□□ -1.63
SPN1	YPR133C	WHI4	Q07655	649 aa	Known RBP	4.87	□□□□□ -1.63
SPN1	YPR133C	SGO1	Q08490	590 aa		4.87	□□□□□ -1.63
SPN1	YPR133C	BEM2	P39960	2167 aa	Known RBP	4.87	□□□□□ -1.63
SPN1	YPR133C	CUP1-1	P0CX80	61 aa		4.86	□□□□□ -1.63
SPN1	YPR133C	CUP1-2	P0CX81	61 aa		4.86	□□□□□ -1.63
SPN1	YPR133C	MET4	P32389	672 aa		4.86	□□□□□ -1.63
SPN1	YPR133C	GCD6	P32501	712 aa	Known RBP	4.86	□□□□□ -1.63
SPN1	YPR133C	RER2	P35196	286 aa		4.86	□□□□□ -1.63
SPN1	YPR133C	CRG1	P38892	291 aa	RIP-Chip data	4.86	□□□□□ -1.63	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms