RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C HIS5P07172 385 aa3.95□□□□□ -1.78
RPC40YPR110C LRG1P35688 1017 aa3.95□□□□□ -1.78
RPC40YPR110C POL12P38121 705 aaPredicted RBP3.95□□□□□ -1.78
RPC40YPR110C IRC24P40580 263 aa3.95□□□□□ -1.78
RPC40YPR110C VPS62P53285 467 aa3.95□□□□□ -1.78
RPC40YPR110C DUS1P53759 423 aaKnown RBP3.95□□□□□ -1.78
RPC40YPR110C MRPL22P53881 309 aa3.95□□□□□ -1.78
RPC40YPR110C HMI1Q12039 706 aa3.95□□□□□ -1.78
RPC40YPR110C FAP7Q12055 197 aaPredicted RBP3.95□□□□□ -1.78
RPC40YPR110C HAL9Q12180 1030 aa3.95□□□□□ -1.78
RPC40YPR110C YOR022CQ12204 715 aa3.95□□□□□ -1.78
RPC40YPR110C SAP190P36123 1033 aa3.94□□□□□ -1.78
RPC40YPR110C SHR5P41912 237 aa3.94□□□□□ -1.78
RPC40YPR110C GZF3P42944 551 aaKnown RBP3.94□□□□□ -1.78
RPC40YPR110C AIM14P53109 570 aa3.94□□□□□ -1.78
RPC40YPR110C PUS2P53167 370 aa3.94□□□□□ -1.78
RPC40YPR110C GCN5Q03330 439 aa3.94□□□□□ -1.78
RPC40YPR110C ROT1Q03691 256 aa3.94□□□□□ -1.78
RPC40YPR110C YOR352WQ08816 343 aa3.94□□□□□ -1.78
RPC40YPR110C GPB1Q08886 897 aa3.94□□□□□ -1.78
RPC40YPR110C YTM1Q12024 460 aaPredicted RBP3.94□□□□□ -1.78
RPC40YPR110C EMC1P25574 760 aa3.93□□□□□ -1.78
RPC40YPR110C TSA1P34760 196 aaKnown RBP3.93□□□□□ -1.78
RPC40YPR110C YKR018CP36114 725 aa3.93□□□□□ -1.78
RPC40YPR110C ENP1P38333 483 aaKnown RBP3.93□□□□□ -1.78
RPC40YPR110C YHR078WP38799 552 aa3.93□□□□□ -1.78
RPC40YPR110C CCT5P40413 562 aaKnown RBP3.93□□□□□ -1.78
RPC40YPR110C DUG1P43616 481 aaKnown RBP3.93□□□□□ -1.78
RPC40YPR110C NCS6P53088 359 aa3.93□□□□□ -1.78
RPC40YPR110C NPY1P53164 384 aa3.93□□□□□ -1.78
RPC40YPR110C RXT3Q07458 294 aa3.93□□□□□ -1.78
RPC40YPR110C WHI4Q07655 649 aaKnown RBP3.93□□□□□ -1.78
RPC40YPR110C TMA17Q12513 150 aa3.93□□□□□ -1.78
RPC40YPR110C YLR149CQ99296 730 aa3.93□□□□□ -1.78
RPC40YPR110C CDC20P26309 610 aa3.92□□□□□ -1.78
RPC40YPR110C EUG1P32474 517 aa3.92□□□□□ -1.78
RPC40YPR110C PRP19P32523 503 aaKnown RBP3.92□□□□□ -1.78
RPC40YPR110C YBR071WP38243 211 aa3.92□□□□□ -1.78
RPC40YPR110C OAF1P39720 1047 aaPredicted RBP3.92□□□□□ -1.78
RPC40YPR110C DOT6P40059 670 aaKnown RBP3.92□□□□□ -1.78
RPC40YPR110C UBC9P50623 157 aaPredicted RBP3.92□□□□□ -1.78
RPC40YPR110C GTF1P53260 183 aaPredicted RBP3.92□□□□□ -1.78
RPC40YPR110C FOL1P53848 824 aa3.92□□□□□ -1.78
RPC40YPR110C CRR1Q05790 422 aa3.92□□□□□ -1.78
RPC40YPR110C ACK1Q07622 623 aaPredicted RBP3.92□□□□□ -1.78
RPC40YPR110C NOP12Q08208 459 aaKnown RBP3.92□□□□□ -1.78
RPC40YPR110C GPR1Q12361 961 aa3.92□□□□□ -1.78
RPC40YPR110C SOD2P00447 233 aa3.91□□□□□ -1.78
RPC40YPR110C SED4P25365 1065 aa3.91□□□□□ -1.78
RPC40YPR110C YKR051WP36142 418 aa3.91□□□□□ -1.78
RPC40YPR110C FLR1P38124 548 aa3.91□□□□□ -1.78
RPC40YPR110C YFL052WP43551 465 aa3.91□□□□□ -1.78
RPC40YPR110C RET2P43621 546 aa3.91□□□□□ -1.78
RPC40YPR110C MNN11P46985 422 aaKnown RBP3.91□□□□□ -1.78
RPC40YPR110C SSY5P47002 699 aa3.91□□□□□ -1.78
RPC40YPR110C GCV2P49095 1034 aa3.91□□□□□ -1.78
RPC40YPR110C ASI2P53895 289 aa3.91□□□□□ -1.78
RPC40YPR110C COG6P53959 839 aa3.91□□□□□ -1.78
RPC40YPR110C RPN7Q06103 429 aaKnown RBP3.91□□□□□ -1.78
RPC40YPR110C CDA2Q06703 312 aa3.91□□□□□ -1.78
RPC40YPR110C DID4P36108 232 aa3.9□□□□□ -1.79
RPC40YPR110C MIP6P38760 659 aaKnown RBP3.9□□□□□ -1.79
RPC40YPR110C NOP2P40991 618 aaKnown RBP3.9□□□□□ -1.79
RPC40YPR110C PCL10P53124 433 aa3.9□□□□□ -1.79
RPC40YPR110C ECM9Q02202 377 aa3.9□□□□□ -1.79
RPC40YPR110C YPL277CQ08989 487 aa3.9□□□□□ -1.79
RPC40YPR110C RPS13P05756 151 aaKnown RBP3.89□□□□□ -1.79
RPC40YPR110C TUB3P09734 445 aaKnown RBP3.89□□□□□ -1.79
RPC40YPR110C SEG2P34250 1132 aa3.89□□□□□ -1.79
RPC40YPR110C MNN4P36044 1178 aa3.89□□□□□ -1.79
RPC40YPR110C MAL31P38156 614 aa3.89□□□□□ -1.79
RPC40YPR110C NIT1P40447 199 aa3.89□□□□□ -1.79
RPC40YPR110C NIT2P47016 307 aa3.89□□□□□ -1.79
RPC40YPR110C YJR039WP47107 1121 aa3.89□□□□□ -1.79
RPC40YPR110C YJR120WP47157 116 aa3.89□□□□□ -1.79
RPC40YPR110C RIM8P53179 542 aa3.89□□□□□ -1.79
RPC40YPR110C SLU7Q02775 382 aaKnown RBP3.89□□□□□ -1.79
RPC40YPR110C YAP6Q03935 383 aa3.89□□□□□ -1.79
RPC40YPR110C MUS81Q04149 632 aaPredicted RBP3.89□□□□□ -1.79
RPC40YPR110C TRE2Q08693 809 aa3.89□□□□□ -1.79
RPC40YPR110C HFI1Q12060 488 aa3.89□□□□□ -1.79
RPC40YPR110C DCS2Q12123 353 aa3.89□□□□□ -1.79
RPC40YPR110C APM4Q99186 491 aa3.89□□□□□ -1.79
RPC40YPR110C Q0142Q9ZZW4 58 aa3.89□□□□□ -1.79
RPC40YPR110C PRP6P19735 899 aaPredicted RBP3.88□□□□□ -1.79
RPC40YPR110C PRP4P20053 465 aaKnown RBP3.88□□□□□ -1.79
RPC40YPR110C SEC21P32074 935 aaKnown RBP3.88□□□□□ -1.79
RPC40YPR110C TDA3P38758 523 aa3.88□□□□□ -1.79
RPC40YPR110C SSZ1P38788 538 aaKnown RBP3.88□□□□□ -1.79
RPC40YPR110C SAK1P38990 1142 aa3.88□□□□□ -1.79
RPC40YPR110C HXT6P39003 570 aaKnown RBP3.88□□□□□ -1.79
RPC40YPR110C HXT7P39004 570 aa3.88□□□□□ -1.79
RPC40YPR110C PLB1P39105 664 aa3.88□□□□□ -1.79
RPC40YPR110C PZF1P39933 429 aa3.88□□□□□ -1.79
RPC40YPR110C GPP2P40106 250 aaKnown RBP3.88□□□□□ -1.79
RPC40YPR110C YGR153WP48238 217 aa3.88□□□□□ -1.79
RPC40YPR110C SPT20P50875 604 aa3.88□□□□□ -1.79
RPC40YPR110C PEX8P53248 589 aa3.88□□□□□ -1.79
RPC40YPR110C ARP4P80428 489 aa3.88□□□□□ -1.79
RPC40YPR110C YLR224WQ05947 369 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms