RNA–Protein interactions for RNA: YPR016C

TIF6, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene TIF6, Length 738 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF6	YPR016C	ECM30	Q06673	1274 aa		10.54	□□□□□ -0.72
TIF6	YPR016C	IWR1	Q07532	353 aa	Predicted RBP	10.54	□□□□□ -0.72
TIF6	YPR016C	YOL098C	Q12496	1037 aa		10.54	□□□□□ -0.72
TIF6	YPR016C	JNM1	P36224	373 aa		10.53	□□□□□ -0.72
TIF6	YPR016C	SMC2	P38989	1170 aa	Known RBP	10.53	□□□□□ -0.72
TIF6	YPR016C	SDS3	P40505	327 aa		10.53	□□□□□ -0.72
TIF6	YPR016C	MMM1	P41800	426 aa		10.53	□□□□□ -0.72
TIF6	YPR016C	SMC3	P47037	1230 aa		10.53	□□□□□ -0.72
TIF6	YPR016C	YNL134C	P53912	376 aa	Known RBP	10.53	□□□□□ -0.72
TIF6	YPR016C	ERG5	P54781	538 aa		10.53	□□□□□ -0.72
TIF6	YPR016C	CWC21	Q03375	135 aa	Known RBP	10.53	□□□□□ -0.72
TIF6	YPR016C	YML082W	Q04533	649 aa	Known RBP	10.53	□□□□□ -0.72
TIF6	YPR016C	PCD1	Q12524	340 aa		10.53	□□□□□ -0.72
TIF6	YPR016C	ASP3-2	P0CX77	362 aa		10.52	□□□□□ -0.73
TIF6	YPR016C	ASP3-3	P0CX78	362 aa		10.52	□□□□□ -0.73
TIF6	YPR016C	ASP3-4	P0CX79	362 aa		10.52	□□□□□ -0.73
TIF6	YPR016C	ASP3-1	P0CZ17	362 aa		10.52	□□□□□ -0.73
TIF6	YPR016C	MTF2	P10849	440 aa		10.52	□□□□□ -0.73
TIF6	YPR016C	NAT1	P12945	854 aa	Known RBP	10.52	□□□□□ -0.73
TIF6	YPR016C	FUB1	P25659	250 aa		10.52	□□□□□ -0.73
TIF6	YPR016C	KIP1	P28742	1111 aa		10.52	□□□□□ -0.73
TIF6	YPR016C	RAD54	P32863	898 aa		10.52	□□□□□ -0.73
TIF6	YPR016C	TRM2	P33753	639 aa		10.52	□□□□□ -0.73
TIF6	YPR016C	UBX7	P38349	436 aa		10.52	□□□□□ -0.73
TIF6	YPR016C	ULI1	P43604	169 aa		10.52	□□□□□ -0.73
TIF6	YPR016C	DAS1	P47005	663 aa		10.52	□□□□□ -0.73
TIF6	YPR016C	CPR7	P47103	393 aa		10.52	□□□□□ -0.73
TIF6	YPR016C	CLA4	P48562	842 aa		10.52	□□□□□ -0.73
TIF6	YPR016C	GCV2	P49095	1034 aa		10.52	□□□□□ -0.73
TIF6	YPR016C	RPA49	Q01080	415 aa	Predicted RBP	10.52	□□□□□ -0.73
TIF6	YPR016C	NEW1	Q08972	1196 aa	Known RBP	10.52	□□□□□ -0.73
TIF6	YPR016C	ALG11	P53954	548 aa	Known RBP	10.51	□□□□□ -0.73
TIF6	YPR016C	UTP5	Q04177	643 aa	Known RBP	10.51	□□□□□ -0.73
TIF6	YPR016C	OPY2	Q06810	360 aa		10.51	□□□□□ -0.73
TIF6	YPR016C	LDB19	Q12502	818 aa		10.51	□□□□□ -0.73
TIF6	YPR016C	SPT2	P06843	333 aa	Predicted RBP	10.5	□□□□□ -0.73
TIF6	YPR016C	CDC42	P19073	191 aa		10.5	□□□□□ -0.73
TIF6	YPR016C	DAL2	P25335	343 aa		10.5	□□□□□ -0.73
TIF6	YPR016C	RRT12	P25381	491 aa		10.5	□□□□□ -0.73
TIF6	YPR016C	RPT1	P33299	467 aa	Known RBP	10.5	□□□□□ -0.73
TIF6	YPR016C	PTC4	P38089	393 aa		10.5	□□□□□ -0.73
TIF6	YPR016C	YAP1801	P38856	637 aa		10.5	□□□□□ -0.73
TIF6	YPR016C	YER186C	P40101	306 aa		10.5	□□□□□ -0.73
TIF6	YPR016C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	10.5	□□□□□ -0.73	not detected
TIF6	YPR016C	ESBP6	P53918	673 aa		10.5	□□□□□ -0.73
TIF6	YPR016C	CTR9	P89105	1077 aa		10.5	□□□□□ -0.73
TIF6	YPR016C	FMP30	Q02883	468 aa		10.5	□□□□□ -0.73
TIF6	YPR016C	STE20	Q03497	939 aa	Known RBP	10.5	□□□□□ -0.73
TIF6	YPR016C	ABP140	Q08641	628 aa	Known RBP	10.5	□□□□□ -0.73
TIF6	YPR016C	SGT2	Q12118	346 aa	Known RBP	10.5	□□□□□ -0.73
TIF6	YPR016C	GIS3	Q12418	502 aa		10.5	□□□□□ -0.73
TIF6	YPR016C	OSH2	Q12451	1283 aa		10.5	□□□□□ -0.73
TIF6	YPR016C	YHL026C	P38740	315 aa		10.49	□□□□□ -0.73
TIF6	YPR016C	SEC9	P40357	651 aa		10.49	□□□□□ -0.73
TIF6	YPR016C	SBE2	P42223	864 aa	Known RBP	10.49	□□□□□ -0.73
TIF6	YPR016C	ALT2	P52892	507 aa		10.49	□□□□□ -0.73
TIF6	YPR016C	ALF1	P53904	254 aa		10.49	□□□□□ -0.73
TIF6	YPR016C	TRP2	P00899	507 aa	Known RBP	10.48	□□□□□ -0.73
TIF6	YPR016C	CDC33	P07260	213 aa	Known RBP	10.48	□□□□□ -0.73
TIF6	YPR016C	CSE2	P33308	149 aa		10.48	□□□□□ -0.73
TIF6	YPR016C	BUD2	P33314	1104 aa		10.48	□□□□□ -0.73
TIF6	YPR016C	TRZ1	P36159	838 aa	Predicted RBP	10.48	□□□□□ -0.73
TIF6	YPR016C	GRS1	P38088	690 aa	Known RBP	10.48	□□□□□ -0.73
TIF6	YPR016C	YMR124W	P39523	943 aa	Known RBP	10.48	□□□□□ -0.73
TIF6	YPR016C	HXT8	P40886	569 aa		10.48	□□□□□ -0.73
TIF6	YPR016C	ISM1	P48526	1002 aa		10.48	□□□□□ -0.73
TIF6	YPR016C	SNU56	Q03782	492 aa	Known RBP	10.48	□□□□□ -0.73
TIF6	YPR016C	PPM1	Q04081	328 aa		10.48	□□□□□ -0.73
TIF6	YPR016C	ESC2	Q06340	456 aa		10.48	□□□□□ -0.73
TIF6	YPR016C	TSR1	Q07381	788 aa	Known RBP	10.48	□□□□□ -0.73
TIF6	YPR016C	YOR022C	Q12204	715 aa		10.48	□□□□□ -0.73
TIF6	YPR016C	PUS1	Q12211	544 aa	Known RBP	10.48	□□□□□ -0.73
TIF6	YPR016C	PET123	P17558	318 aa		10.47	□□□□□ -0.73
TIF6	YPR016C	CAD1	P24813	409 aa	Known RBP	10.47	□□□□□ -0.73
TIF6	YPR016C	RAD57	P25301	460 aa		10.47	□□□□□ -0.73
TIF6	YPR016C	STO1	P34160	861 aa	Known RBP	10.47	□□□□□ -0.73
TIF6	YPR016C	CSG2	P35206	410 aa		10.47	□□□□□ -0.73
TIF6	YPR016C	EXO5	P38289	585 aa		10.47	□□□□□ -0.73
TIF6	YPR016C	BRL1	P38770	471 aa		10.47	□□□□□ -0.73
TIF6	YPR016C	FIR1	P40020	876 aa		10.47	□□□□□ -0.73
TIF6	YPR016C	YFL040W	P43562	540 aa		10.47	□□□□□ -0.73
TIF6	YPR016C	STU2	P46675	888 aa		10.47	□□□□□ -0.73
TIF6	YPR016C	VPS70	P47161	811 aa		10.47	□□□□□ -0.73
TIF6	YPR016C	APT1	P49435	187 aa	Known RBP	10.47	□□□□□ -0.73
TIF6	YPR016C	STB4	P50104	949 aa		10.47	□□□□□ -0.73
TIF6	YPR016C	DRN1	P53255	507 aa	Known RBP	10.47	□□□□□ -0.73
TIF6	YPR016C	MAG2	Q06436	670 aa	Known RBP	10.47	□□□□□ -0.73
TIF6	YPR016C	CDD1	Q06549	142 aa		10.47	□□□□□ -0.73
TIF6	YPR016C	YLR001C	Q07895	862 aa		10.47	□□□□□ -0.73
TIF6	YPR016C	SEC23	P15303	768 aa	Known RBP	10.46	□□□□□ -0.73
TIF6	YPR016C	COX11	P19516	300 aa	Known RBP	10.46	□□□□□ -0.73
TIF6	YPR016C	RSA4	P25382	515 aa	Known RBP	10.46	□□□□□ -0.73
TIF6	YPR016C	YHR054C	P38780	354 aa		10.46	□□□□□ -0.73
TIF6	YPR016C	SET5	P38890	526 aa	Known RBP	10.46	□□□□□ -0.73
TIF6	YPR016C	CCC2	P38995	1004 aa		10.46	□□□□□ -0.73
TIF6	YPR016C	CAJ1	P39101	391 aa		10.46	□□□□□ -0.73
TIF6	YPR016C	SPO74	P45819	413 aa		10.46	□□□□□ -0.73
TIF6	YPR016C	FOL2	P51601	243 aa	Known RBP	10.46	□□□□□ -0.73
TIF6	YPR016C	YLR455W	Q06188	304 aa		10.46	□□□□□ -0.73
TIF6	YPR016C	ECM3	Q99252	613 aa		10.46	□□□□□ -0.73

Retrieved 100 of 5,963 RNA–protein pairs in 60.1 ms