RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeast

Gene SSO1, Length 873 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSO1	YPL232W	ULP2	P40537	1034 aa	Predicted RBP	5.78	□□□□□ -1.48
SSO1	YPL232W	STB4	P50104	949 aa		5.78	□□□□□ -1.48
SSO1	YPL232W	ALT1	P52893	592 aa		5.78	□□□□□ -1.48
SSO1	YPL232W	CAF130	P53280	1122 aa	Predicted RBP	5.78	□□□□□ -1.48
SSO1	YPL232W	NAF1	P53919	492 aa	Known RBP	5.78	□□□□□ -1.48
SSO1	YPL232W	NCS2	P53923	493 aa	Predicted RBP	5.78	□□□□□ -1.48
SSO1	YPL232W	FUS2	Q05670	677 aa		5.78	□□□□□ -1.48
SSO1	YPL232W	OSW2	Q12202	724 aa		5.78	□□□□□ -1.48
SSO1	YPL232W	THR4	P16120	514 aa	Known RBP	5.77	□□□□□ -1.49
SSO1	YPL232W	ERC1	P38767	581 aa		5.77	□□□□□ -1.49
SSO1	YPL232W	RPN3	P40016	523 aa	Known RBP	5.77	□□□□□ -1.49
SSO1	YPL232W	TAF1	P46677	1066 aa		5.77	□□□□□ -1.49
SSO1	YPL232W	CCM1	P48237	864 aa	Predicted RBP	5.77	□□□□□ -1.49
SSO1	YPL232W	PGA2	P53903	129 aa		5.77	□□□□□ -1.49
SSO1	YPL232W	TRS130	Q03660	1102 aa		5.77	□□□□□ -1.49
SSO1	YPL232W	LEA1	Q08963	238 aa	Predicted RBP	5.77	□□□□□ -1.49
SSO1	YPL232W	RAM2	P29703	316 aa		5.76	□□□□□ -1.49
SSO1	YPL232W	GPI10	P30777	616 aa		5.76	□□□□□ -1.49
SSO1	YPL232W	GUT1	P32190	709 aa		5.76	□□□□□ -1.49
SSO1	YPL232W	FBP26	P32604	452 aa		5.76	□□□□□ -1.49
SSO1	YPL232W	CHS6	P40955	746 aa		5.76	□□□□□ -1.49
SSO1	YPL232W	ROG3	P43602	733 aa		5.76	□□□□□ -1.49
SSO1	YPL232W	FYV8	P46949	817 aa	Known RBP	5.76	□□□□□ -1.49
SSO1	YPL232W	YDR090C	Q03193	310 aa		5.76	□□□□□ -1.49
SSO1	YPL232W	CWC21	Q03375	135 aa	Known RBP	5.76	□□□□□ -1.49
SSO1	YPL232W	CEX1	Q12453	761 aa		5.76	□□□□□ -1.49
SSO1	YPL232W	PRP8	P33334	2413 aa	Known RBP	5.75	□□□□□ -1.49
SSO1	YPL232W	PTC3	P34221	468 aa	Known RBP	5.75	□□□□□ -1.49
SSO1	YPL232W	MMS4	P38257	691 aa		5.75	□□□□□ -1.49
SSO1	YPL232W	OPY1	P38271	328 aa		5.75	□□□□□ -1.49
SSO1	YPL232W	RGD1	P38339	666 aa		5.75	□□□□□ -1.49
SSO1	YPL232W	STT3	P39007	718 aa	Known RBP	5.75	□□□□□ -1.49
SSO1	YPL232W	PCF11	P39081	626 aa	Predicted RBP	5.75	□□□□□ -1.49
SSO1	YPL232W	SPO22	P40511	975 aa		5.75	□□□□□ -1.49
SSO1	YPL232W	EPL1	P43572	832 aa		5.75	□□□□□ -1.49
SSO1	YPL232W	IES1	P43579	692 aa		5.75	□□□□□ -1.49
SSO1	YPL232W	POL31	P46957	487 aa		5.75	□□□□□ -1.49
SSO1	YPL232W	IMP4	P53941	290 aa	Known RBP	5.75	□□□□□ -1.49
SSO1	YPL232W	ARK1	P53974	638 aa		5.75	□□□□□ -1.49
SSO1	YPL232W	TRS120	Q04183	1289 aa		5.75	□□□□□ -1.49
SSO1	YPL232W	SLK19	Q08581	821 aa	Known RBP	5.75	□□□□□ -1.49
SSO1	YPL232W	YPQ1	Q12010	308 aa		5.75	□□□□□ -1.49
SSO1	YPL232W	RPL4A	P10664	362 aa	Known RBP	5.74	□□□□□ -1.49
SSO1	YPL232W	MTF1	P14908	341 aa	Known RBP	5.74	□□□□□ -1.49
SSO1	YPL232W	DBP5	P20449	482 aa	Known RBP	5.74	□□□□□ -1.49
SSO1	YPL232W	PPH22	P23595	377 aa		5.74	□□□□□ -1.49
SSO1	YPL232W	RPC53	P25441	422 aa		5.74	□□□□□ -1.49
SSO1	YPL232W	PRR1	P28708	518 aa		5.74	□□□□□ -1.49
SSO1	YPL232W	RAD16	P31244	790 aa		5.74	□□□□□ -1.49
SSO1	YPL232W	PRS1	P32895	427 aa	Known RBP	5.74	□□□□□ -1.49
SSO1	YPL232W	TRM2	P33753	639 aa		5.74	□□□□□ -1.49
SSO1	YPL232W	EDS1	P38073	919 aa		5.74	□□□□□ -1.49
SSO1	YPL232W	BRN1	P38170	754 aa		5.74	□□□□□ -1.49
SSO1	YPL232W	DOT6	P40059	670 aa	Known RBP	5.74	□□□□□ -1.49
SSO1	YPL232W	RMD8	P43620	662 aa		5.74	□□□□□ -1.49
SSO1	YPL232W	RPL4B	P49626	362 aa	Known RBP	5.74	□□□□□ -1.49
SSO1	YPL232W	UTP8	P53276	713 aa	Known RBP	5.74	□□□□□ -1.49
SSO1	YPL232W	HER2	Q03557	464 aa		5.74	□□□□□ -1.49
SSO1	YPL232W	JIP5	Q06214	492 aa	Predicted RBP	5.74	□□□□□ -1.49
SSO1	YPL232W	YLH47	Q06493	454 aa		5.74	□□□□□ -1.49
SSO1	YPL232W	FLC1	Q08967	793 aa		5.74	□□□□□ -1.49
SSO1	YPL232W	CTF3	Q12748	733 aa		5.74	□□□□□ -1.49
SSO1	YPL232W	BRR2	P32639	2163 aa	Known RBP	5.74	□□□□□ -1.49
SSO1	YPL232W	SLA2	P33338	968 aa		5.73	□□□□□ -1.49
SSO1	YPL232W	TCD2	P36101	447 aa	Known RBP	5.73	□□□□□ -1.49
SSO1	YPL232W	PGM2	P37012	569 aa	Known RBP	5.73	□□□□□ -1.49
SSO1	YPL232W	SIF2	P38262	535 aa		5.73	□□□□□ -1.49
SSO1	YPL232W	RPN10	P38886	268 aa	Known RBP	5.73	□□□□□ -1.49
SSO1	YPL232W	GIP4	P39732	760 aa		5.73	□□□□□ -1.49
SSO1	YPL232W	BTT1	P40314	149 aa	Predicted RBP	5.73	□□□□□ -1.49
SSO1	YPL232W	VPS25	P47142	202 aa		5.73	□□□□□ -1.49
SSO1	YPL232W	YGR153W	P48238	217 aa		5.73	□□□□□ -1.49
SSO1	YPL232W	SHE10	P53075	577 aa		5.73	□□□□□ -1.49
SSO1	YPL232W	NMA2	P53204	395 aa		5.73	□□□□□ -1.49
SSO1	YPL232W	HXT17	P53631	564 aa		5.73	□□□□□ -1.49
SSO1	YPL232W	VTC3	Q02725	835 aa		5.73	□□□□□ -1.49
SSO1	YPL232W	SNU56	Q03782	492 aa	Known RBP	5.73	□□□□□ -1.49
SSO1	YPL232W	BSP1	Q06604	576 aa		5.73	□□□□□ -1.49
SSO1	YPL232W	SHS1	Q07657	551 aa		5.73	□□□□□ -1.49
SSO1	YPL232W	SMC6	Q12749	1114 aa		5.73	□□□□□ -1.49
SSO1	YPL232W	TPK1	P06244	397 aa		5.72	□□□□□ -1.49
SSO1	YPL232W	CDC6	P09119	513 aa		5.72	□□□□□ -1.49
SSO1	YPL232W	MATALPHA2	P0CY08	210 aa		5.72	□□□□□ -1.49
SSO1	YPL232W	HMLALPHA2	P0CY09	210 aa		5.72	□□□□□ -1.49
SSO1	YPL232W	VPS1	P21576	704 aa	Known RBP	5.72	□□□□□ -1.49
SSO1	YPL232W	VPS3	P23643	1011 aa		5.72	□□□□□ -1.49
SSO1	YPL232W	SWE1	P32944	819 aa		5.72	□□□□□ -1.49
SSO1	YPL232W	VPS35	P34110	944 aa		5.72	□□□□□ -1.49
SSO1	YPL232W	YKR051W	P36142	418 aa		5.72	□□□□□ -1.49
SSO1	YPL232W	YBL036C	P38197	257 aa		5.72	□□□□□ -1.49
SSO1	YPL232W	GIP1	P38229	639 aa		5.72	□□□□□ -1.49
SSO1	YPL232W	TIF5	P38431	405 aa	Known RBP	5.72	□□□□□ -1.49
SSO1	YPL232W	SIP3	P38717	1229 aa		5.72	□□□□□ -1.49
SSO1	YPL232W	PIH1	P38768	344 aa		5.72	□□□□□ -1.49
SSO1	YPL232W	YHR054C	P38780	354 aa		5.72	□□□□□ -1.49
SSO1	YPL232W	BIM1	P40013	344 aa		5.72	□□□□□ -1.49
SSO1	YPL232W	AIM9	P40053	627 aa	Known RBP	5.72	□□□□□ -1.49
SSO1	YPL232W	ORC5	P50874	479 aa		5.72	□□□□□ -1.49
SSO1	YPL232W	KRE33	P53914	1056 aa	Known RBP	5.72	□□□□□ -1.49
SSO1	YPL232W	YAT1	P80235	687 aa		5.72	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 217.3 ms