RNA–Protein interactions for RNA: YOR316C

COT1, Transcript of Vacuolar transporter that mediates zinc transport into the vacuole, yeast

Gene COT1, Length 1,320 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
COT1	YOR316C	MRPL7	P36519	292 aa		5.74	□□□□□ -1.49
COT1	YOR316C	RFS1	P38234	210 aa	Known RBP	5.74	□□□□□ -1.49
COT1	YOR316C	CCC2	P38995	1004 aa		5.74	□□□□□ -1.49
COT1	YOR316C	HMF1	P40037	129 aa	Known RBP	5.74	□□□□□ -1.49
COT1	YOR316C	ALO1	P54783	526 aa	Known RBP	5.74	□□□□□ -1.49
COT1	YOR316C	GIS4	Q04233	774 aa		5.74	□□□□□ -1.49
COT1	YOR316C	RRD2	Q12461	358 aa		5.74	□□□□□ -1.49
COT1	YOR316C	COQ1	P18900	473 aa		5.73	□□□□□ -1.49
COT1	YOR316C	SEG2	P34250	1132 aa		5.73	□□□□□ -1.49
COT1	YOR316C	DRE2	P36152	348 aa		5.73	□□□□□ -1.49
COT1	YOR316C	KTR3	P38130	404 aa	Predicted RBP	5.73	□□□□□ -1.49
COT1	YOR316C	PBY1	P38254	753 aa		5.73	□□□□□ -1.49
COT1	YOR316C	PEX28	P38848	579 aa		5.73	□□□□□ -1.49
COT1	YOR316C	RRP8	P38961	392 aa	Known RBP	5.73	□□□□□ -1.49
COT1	YOR316C	FMS1	P50264	508 aa		5.73	□□□□□ -1.49
COT1	YOR316C	NKP2	Q06162	153 aa		5.73	□□□□□ -1.49
COT1	YOR316C	VIP1	Q06685	1146 aa	Known RBP	5.73	□□□□□ -1.49
COT1	YOR316C	MNL2	Q12205	849 aa		5.73	□□□□□ -1.49
COT1	YOR316C	CLF1	Q12309	687 aa	Predicted RBP	5.73	□□□□□ -1.49
COT1	YOR316C	NHA1	Q99271	985 aa		5.73	□□□□□ -1.49
COT1	YOR316C	RPS9A	O13516	197 aa	Known RBP	5.72	□□□□□ -1.49
COT1	YOR316C	ADK2	P26364	225 aa		5.72	□□□□□ -1.49
COT1	YOR316C	PRO3	P32263	286 aa	Known RBP	5.72	□□□□□ -1.49
COT1	YOR316C	TVP38	P36164	337 aa		5.72	□□□□□ -1.49
COT1	YOR316C	GCV2	P49095	1034 aa		5.72	□□□□□ -1.49
COT1	YOR316C	MDR1	P53258	950 aa		5.72	□□□□□ -1.49
COT1	YOR316C	YNL011C	P53980	444 aa		5.72	□□□□□ -1.49
COT1	YOR316C	RSC4	Q02206	625 aa		5.72	□□□□□ -1.49
COT1	YOR316C	TAH18	Q12181	623 aa		5.72	□□□□□ -1.49
COT1	YOR316C	RAD50	P12753	1312 aa		5.71	□□□□□ -1.49
COT1	YOR316C	FUS1	P11710	512 aa		5.71	□□□□□ -1.5
COT1	YOR316C	OPI1	P21957	404 aa		5.71	□□□□□ -1.5
COT1	YOR316C	PYC2	P32327	1180 aa	Known RBP	5.71	□□□□□ -1.5
COT1	YOR316C	CTR1	P49573	406 aa		5.71	□□□□□ -1.5
COT1	YOR316C	PSP2	P50109	593 aa	Known RBP	5.71	□□□□□ -1.5
COT1	YOR316C	MUK1	Q02866	612 aa		5.71	□□□□□ -1.5
COT1	YOR316C	BSC2	Q05611	235 aa		5.71	□□□□□ -1.5
COT1	YOR316C	SUE1	Q06524	206 aa		5.71	□□□□□ -1.5
COT1	YOR316C	PEX19	Q07418	342 aa		5.71	□□□□□ -1.5
COT1	YOR316C	GPI13	Q07830	1017 aa		5.71	□□□□□ -1.5
COT1	YOR316C	PIN2	Q12057	282 aa		5.71	□□□□□ -1.5
COT1	YOR316C	PUS1	Q12211	544 aa	Known RBP	5.71	□□□□□ -1.5
COT1	YOR316C	VAS1	P07806	1104 aa	Known RBP	5.7	□□□□□ -1.5
COT1	YOR316C	TPM1	P17536	199 aa	Known RBP	5.7	□□□□□ -1.5
COT1	YOR316C	UBC1	P21734	215 aa	Known RBP	5.7	□□□□□ -1.5
COT1	YOR316C	RPL8B	P29453	256 aa	Known RBP	5.7	□□□□□ -1.5
COT1	YOR316C	UGA4	P32837	571 aa		5.7	□□□□□ -1.5
COT1	YOR316C	SOK2	P53438	785 aa	Predicted RBP	5.7	□□□□□ -1.5
COT1	YOR316C	CDC55	Q00362	526 aa		5.7	□□□□□ -1.5
COT1	YOR316C	YML053C	Q04978	212 aa		5.7	□□□□□ -1.5
COT1	YOR316C	SVF1	Q05515	481 aa		5.7	□□□□□ -1.5
COT1	YOR316C	YLR257W	Q06146	321 aa	Known RBP	5.7	□□□□□ -1.5
COT1	YOR316C	HIS5	P07172	385 aa		5.69	□□□□□ -1.5
COT1	YOR316C	RIT1	P23796	513 aa		5.69	□□□□□ -1.5
COT1	YOR316C	SEC21	P32074	935 aa	Known RBP	5.69	□□□□□ -1.5
COT1	YOR316C	TFA2	P36145	328 aa		5.69	□□□□□ -1.5
COT1	YOR316C	MCX1	P38323	520 aa	Predicted RBP	5.69	□□□□□ -1.5
COT1	YOR316C	RIM4	P38741	713 aa		5.69	□□□□□ -1.5
COT1	YOR316C	ESL1	P40456	1118 aa		5.69	□□□□□ -1.5
COT1	YOR316C	TED1	P40533	473 aa		5.69	□□□□□ -1.5
COT1	YOR316C	HUL5	P53119	910 aa		5.69	□□□□□ -1.5
COT1	YOR316C	ENV11	P53246	860 aa		5.69	□□□□□ -1.5
COT1	YOR316C	CTR9	P89105	1077 aa		5.69	□□□□□ -1.5
COT1	YOR316C	RPS15	Q01855	142 aa	Known RBP	5.69	□□□□□ -1.5
COT1	YOR316C	YPR053C	Q6Q5F3	151 aa		5.69	□□□□□ -1.5
COT1	YOR316C	CCH1	P50077	2039 aa		5.68	□□□□□ -1.5
COT1	YOR316C	CHO2	P05374	869 aa	Known RBP	5.68	□□□□□ -1.5
COT1	YOR316C	MCM3	P24279	971 aa	Known RBP	5.68	□□□□□ -1.5
COT1	YOR316C	MYO3	P36006	1272 aa		5.68	□□□□□ -1.5
COT1	YOR316C	ECM2	P38241	364 aa	Known RBP	5.68	□□□□□ -1.5
COT1	YOR316C	SFB3	P38810	929 aa		5.68	□□□□□ -1.5
COT1	YOR316C	FMO1	P38866	432 aa		5.68	□□□□□ -1.5
COT1	YOR316C	YEL025C	P39991	1188 aa		5.68	□□□□□ -1.5
COT1	YOR316C	GIP2	P40036	548 aa		5.68	□□□□□ -1.5
COT1	YOR316C	MRPS35	P53292	345 aa		5.68	□□□□□ -1.5
COT1	YOR316C	YMR187C	Q03236	431 aa		5.68	□□□□□ -1.5
COT1	YOR316C	RRP15	Q06511	250 aa	Predicted RBP	5.68	□□□□□ -1.5
COT1	YOR316C	NSE1	Q07913	336 aa		5.68	□□□□□ -1.5
COT1	YOR316C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
COT1	YOR316C	RIF1	P29539	1916 aa		5.67	□□□□□ -1.5
COT1	YOR316C	HOM2	P13663	365 aa	Known RBP	5.67	□□□□□ -1.5
COT1	YOR316C	PWP2	P25635	923 aa	Known RBP	5.67	□□□□□ -1.5
COT1	YOR316C	CDC48	P25694	835 aa	Known RBP	5.67	□□□□□ -1.5
COT1	YOR316C	DID4	P36108	232 aa		5.67	□□□□□ -1.5
COT1	YOR316C	PPX1	P38698	397 aa		5.67	□□□□□ -1.5
COT1	YOR316C	YHL026C	P38740	315 aa		5.67	□□□□□ -1.5
COT1	YOR316C	YHL008C	P38750	627 aa		5.67	□□□□□ -1.5
COT1	YOR316C	NDT80	P38830	627 aa		5.67	□□□□□ -1.5
COT1	YOR316C	YHR202W	P38887	602 aa		5.67	□□□□□ -1.5
COT1	YOR316C	ALT2	P52892	507 aa		5.67	□□□□□ -1.5
COT1	YOR316C	YNL134C	P53912	376 aa	Known RBP	5.67	□□□□□ -1.5
COT1	YOR316C	RPT6	Q01939	405 aa	Known RBP	5.67	□□□□□ -1.5
COT1	YOR316C	SSF2	Q12153	453 aa	Predicted RBP	5.67	□□□□□ -1.5
COT1	YOR316C	WHI5	Q12416	295 aa		5.67	□□□□□ -1.5
COT1	YOR316C	MEX67	Q99257	599 aa	Known RBP	5.67	□□□□□ -1.5
COT1	YOR316C	COY1	P34237	679 aa		5.66	□□□□□ -1.5
COT1	YOR316C	NMD3	P38861	518 aa	Known RBP	5.66	□□□□□ -1.5
COT1	YOR316C	TPM2	P40414	161 aa		5.66	□□□□□ -1.5
COT1	YOR316C	YIR016W	P40572	265 aa		5.66	□□□□□ -1.5
COT1	YOR316C	MAF1	P41910	395 aa		5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms