RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W PPS1P38148 807 aa6.28□□□□□ -1.4
VPS5YOR069W MMS21P38632 267 aa6.28□□□□□ -1.4
VPS5YOR069W CBK1P53894 756 aa6.28□□□□□ -1.4
VPS5YOR069W NOP15P53927 220 aaPredicted RBP6.28□□□□□ -1.4
VPS5YOR069W MTG1Q03151 367 aaPredicted RBP6.28□□□□□ -1.4
VPS5YOR069W PPM1Q04081 328 aa6.28□□□□□ -1.4
VPS5YOR069W NSE1Q07913 336 aa6.28□□□□□ -1.4
VPS5YOR069W CDC53Q12018 815 aaKnown RBP6.28□□□□□ -1.4
VPS5YOR069W YRF1-3P0CX14 1859 aa6.28□□□□□ -1.4
VPS5YOR069W YRF1-7P0CX15 1859 aa6.28□□□□□ -1.4
VPS5YOR069W YRF1-6P53819 1859 aa6.28□□□□□ -1.4
VPS5YOR069W CKA2P19454 339 aa6.27□□□□□ -1.41
VPS5YOR069W EUG1P32474 517 aa6.27□□□□□ -1.41
VPS5YOR069W TFC4P33339 1025 aa6.27□□□□□ -1.41
VPS5YOR069W SAS3P34218 831 aa6.27□□□□□ -1.41
VPS5YOR069W AST1P35183 429 aa6.27□□□□□ -1.41
VPS5YOR069W VHC1P38329 1120 aa6.27□□□□□ -1.41
VPS5YOR069W RRT2P38332 387 aa6.27□□□□□ -1.41
VPS5YOR069W FMP33P46998 180 aa6.27□□□□□ -1.41
VPS5YOR069W TEL2P53038 688 aa6.27□□□□□ -1.41
VPS5YOR069W RPL22BP56628 122 aaKnown RBP6.27□□□□□ -1.41
VPS5YOR069W ACL4Q03771 387 aa6.27□□□□□ -1.41
VPS5YOR069W MSH5Q12175 901 aa6.27□□□□□ -1.41
VPS5YOR069W BUG1Q12191 341 aa6.27□□□□□ -1.41
VPS5YOR069W SUI3P09064 285 aaKnown RBP6.26□□□□□ -1.41
VPS5YOR069W YEL076C-AP0CX16 216 aa6.26□□□□□ -1.41
VPS5YOR069W YLR464WP0CX17 216 aa6.26□□□□□ -1.41
VPS5YOR069W YAK1P14680 807 aa6.26□□□□□ -1.41
VPS5YOR069W CBF1P17106 351 aa6.26□□□□□ -1.41
VPS5YOR069W PHO87P25360 923 aa6.26□□□□□ -1.41
VPS5YOR069W RAM2P29703 316 aa6.26□□□□□ -1.41
VPS5YOR069W MGM1P32266 881 aa6.26□□□□□ -1.41
VPS5YOR069W YKR078WP36158 585 aaKnown RBP6.26□□□□□ -1.41
VPS5YOR069W HIS2P38635 335 aa6.26□□□□□ -1.41
VPS5YOR069W YEL076CP39971 216 aa6.26□□□□□ -1.41
VPS5YOR069W SDS3P40505 327 aa6.26□□□□□ -1.41
VPS5YOR069W STB1P42845 420 aa6.26□□□□□ -1.41
VPS5YOR069W CIT3P43635 486 aa6.26□□□□□ -1.41
VPS5YOR069W RPA14P50106 137 aa6.26□□□□□ -1.41
VPS5YOR069W YKR005CQ02203 525 aa6.26□□□□□ -1.41
VPS5YOR069W YDR278CQ05612 105 aa6.26□□□□□ -1.41
VPS5YOR069W TDA5Q06417 326 aaKnown RBP6.26□□□□□ -1.41
VPS5YOR069W URA4P20051 364 aa6.26□□□□□ -1.41
VPS5YOR069W MRPL25P23369 157 aa6.26□□□□□ -1.41
VPS5YOR069W KIP2P28743 706 aa6.26□□□□□ -1.41
VPS5YOR069W MET4P32389 672 aa6.26□□□□□ -1.41
VPS5YOR069W PRP40P33203 583 aaKnown RBP6.26□□□□□ -1.41
VPS5YOR069W YBP1P38315 674 aa6.26□□□□□ -1.41
VPS5YOR069W MSG5P38590 489 aa6.26□□□□□ -1.41
VPS5YOR069W END3P39013 349 aa6.26□□□□□ -1.41
VPS5YOR069W CCT3P39077 534 aaKnown RBP6.26□□□□□ -1.41
VPS5YOR069W PTP3P40048 928 aa6.26□□□□□ -1.41
VPS5YOR069W PSY2P40164 858 aa6.26□□□□□ -1.41
VPS5YOR069W YFR006WP43590 535 aa6.26□□□□□ -1.41
VPS5YOR069W UBP15P50101 1230 aa6.26□□□□□ -1.41
VPS5YOR069W USE1P53146 245 aa6.26□□□□□ -1.41
VPS5YOR069W BNI5P53890 448 aaKnown RBP6.26□□□□□ -1.41
VPS5YOR069W CSM3Q04659 317 aa6.26□□□□□ -1.41
VPS5YOR069W DSE3Q08729 430 aa6.26□□□□□ -1.41
VPS5YOR069W YOR389WQ08912 624 aa6.26□□□□□ -1.41
VPS5YOR069W TCO89Q08921 799 aa6.26□□□□□ -1.41
VPS5YOR069W VIK1Q12045 647 aa6.26□□□□□ -1.41
VPS5YOR069W TAF3Q12297 353 aa6.26□□□□□ -1.41
VPS5YOR069W RAD61Q99359 647 aa6.26□□□□□ -1.41
VPS5YOR069W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
VPS5YOR069W MST1P07236 462 aa6.25□□□□□ -1.41
VPS5YOR069W DPB2P24482 689 aaPredicted RBP6.25□□□□□ -1.41
VPS5YOR069W MRM1P25270 412 aa6.25□□□□□ -1.41
VPS5YOR069W KIP1P28742 1111 aa6.25□□□□□ -1.41
VPS5YOR069W RPL8BP29453 256 aaKnown RBP6.25□□□□□ -1.41
VPS5YOR069W FRD1P32614 470 aaKnown RBP6.25□□□□□ -1.41
VPS5YOR069W ATO2P32907 282 aa6.25□□□□□ -1.41
VPS5YOR069W MRP8P35719 219 aa6.25□□□□□ -1.41
VPS5YOR069W HES1P35843 434 aa6.25□□□□□ -1.41
VPS5YOR069W PTK1P36002 662 aaPredicted RBP6.25□□□□□ -1.41
VPS5YOR069W YKL023WP36103 277 aaKnown RBP6.25□□□□□ -1.41
VPS5YOR069W OAF1P39720 1047 aaPredicted RBP6.25□□□□□ -1.41
VPS5YOR069W YGR016WP53209 190 aa6.25□□□□□ -1.41
VPS5YOR069W ORM1P53224 222 aa6.25□□□□□ -1.41
VPS5YOR069W DRN1P53255 507 aaKnown RBP6.25□□□□□ -1.41
VPS5YOR069W OSH6Q02201 448 aa6.25□□□□□ -1.41
VPS5YOR069W HMO1Q03973 246 aaKnown RBP6.25□□□□□ -1.41
VPS5YOR069W SXM1Q04175 944 aaKnown RBP6.25□□□□□ -1.41
VPS5YOR069W VHS3Q08438 674 aa6.25□□□□□ -1.41
VPS5YOR069W SGT2Q12118 346 aaKnown RBP6.25□□□□□ -1.41
VPS5YOR069W THS1P04801 734 aaKnown RBP6.25□□□□□ -1.41
VPS5YOR069W HEM15P16622 393 aa6.25□□□□□ -1.41
VPS5YOR069W PUF4P25339 888 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
VPS5YOR069W ADY2P25613 283 aa6.25□□□□□ -1.41
VPS5YOR069W TRK2P28584 889 aa6.25□□□□□ -1.41
VPS5YOR069W TRM2P33753 639 aa6.25□□□□□ -1.41
VPS5YOR069W MSN5P52918 1224 aa6.25□□□□□ -1.41
VPS5YOR069W GUP1P53154 560 aa6.25□□□□□ -1.41
VPS5YOR069W YLH47Q06493 454 aa6.25□□□□□ -1.41
VPS5YOR069W NOC3Q07896 663 aaPredicted RBP6.25□□□□□ -1.41
VPS5YOR069W OXR1Q08952 273 aa6.25□□□□□ -1.41
VPS5YOR069W FAL1Q12099 399 aaKnown RBP6.25□□□□□ -1.41
VPS5YOR069W NFI1Q12216 726 aa6.25□□□□□ -1.41
VPS5YOR069W RPN2P32565 945 aaKnown RBP6.24□□□□□ -1.41
VPS5YOR069W FES1P38260 290 aa6.24□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms