RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W OYE2Q03558 400 aaKnown RBP3.72□□□□□ -1.81
SWM2YNR004W SEG1Q04279 960 aa3.72□□□□□ -1.81
SWM2YNR004W AIM44Q99299 758 aa3.72□□□□□ -1.81
SWM2YNR004W MPH2P0CD99 609 aa3.71□□□□□ -1.82
SWM2YNR004W LAT1P12695 482 aaKnown RBP3.71□□□□□ -1.82
SWM2YNR004W AGP1P25376 633 aa3.71□□□□□ -1.82
SWM2YNR004W BCD1P38772 366 aa3.71□□□□□ -1.82
SWM2YNR004W HDA1P53973 706 aa3.71□□□□□ -1.82
SWM2YNR004W VPS16Q03308 798 aa3.71□□□□□ -1.82
SWM2YNR004W FAL1Q12099 399 aaKnown RBP3.71□□□□□ -1.82
SWM2YNR004W MAD1P40957 749 aa3.7□□□□□ -1.82
SWM2YNR004W RGT2Q12300 763 aa3.7□□□□□ -1.82
SWM2YNR004W VPS34P22543 875 aa3.69□□□□□ -1.82
SWM2YNR004W PTP1P25044 335 aa3.69□□□□□ -1.82
SWM2YNR004W YJL049WP47048 450 aa3.69□□□□□ -1.82
SWM2YNR004W CCM1P48237 864 aaPredicted RBP3.69□□□□□ -1.82
SWM2YNR004W GDE1Q02979 1223 aa3.69□□□□□ -1.82
SWM2YNR004W ERT1P38140 529 aa3.68□□□□□ -1.82
SWM2YNR004W PZF1P39933 429 aa3.68□□□□□ -1.82
SWM2YNR004W NDC80P40460 691 aa3.68□□□□□ -1.82
SWM2YNR004W STB2P46679 850 aa3.68□□□□□ -1.82
SWM2YNR004W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
SWM2YNR004W NNF1P47149 201 aa3.68□□□□□ -1.82
SWM2YNR004W TPO2P53283 614 aa3.68□□□□□ -1.82
SWM2YNR004W ASM4Q05166 528 aa3.68□□□□□ -1.82
SWM2YNR004W PIN2Q12057 282 aa3.68□□□□□ -1.82
SWM2YNR004W RGT1P32862 1170 aa3.67□□□□□ -1.82
SWM2YNR004W VBA5P36172 582 aa3.67□□□□□ -1.82
SWM2YNR004W BNA3P47039 444 aaKnown RBP3.67□□□□□ -1.82
SWM2YNR004W BPL1P48445 690 aaPredicted RBP3.67□□□□□ -1.82
SWM2YNR004W UBC11P52492 156 aa3.67□□□□□ -1.82
SWM2YNR004W YAP1802P53309 568 aa3.67□□□□□ -1.82
SWM2YNR004W DUS1P53759 423 aaKnown RBP3.67□□□□□ -1.82
SWM2YNR004W MPS1P54199 764 aa3.67□□□□□ -1.82
SWM2YNR004W MUS81Q04149 632 aaPredicted RBP3.67□□□□□ -1.82
SWM2YNR004W SIT1P39980 628 aa3.66□□□□□ -1.82
SWM2YNR004W HOS4P40480 1083 aa3.66□□□□□ -1.82
SWM2YNR004W OSW1Q08692 278 aa3.66□□□□□ -1.82
SWM2YNR004W TGL5Q12043 749 aa3.66□□□□□ -1.82
SWM2YNR004W HAL9Q12180 1030 aa3.66□□□□□ -1.82
SWM2YNR004W YLR415CO13578 112 aa3.65□□□□□ -1.83
SWM2YNR004W SAK1P38990 1142 aa3.65□□□□□ -1.83
SWM2YNR004W BDH2P39713 417 aa3.65□□□□□ -1.83
SWM2YNR004W LTP1P40347 161 aa3.65□□□□□ -1.83
SWM2YNR004W NET1P47035 1189 aa3.65□□□□□ -1.83
SWM2YNR004W HIR1P32479 840 aa3.64□□□□□ -1.83
SWM2YNR004W PAC2P39937 518 aa3.64□□□□□ -1.83
SWM2YNR004W TOK1P40310 691 aa3.64□□□□□ -1.83
SWM2YNR004W PFA3P42836 336 aa3.64□□□□□ -1.83
SWM2YNR004W CWC24P53769 259 aa3.64□□□□□ -1.83
SWM2YNR004W SHE9Q04172 456 aa3.64□□□□□ -1.83
SWM2YNR004W JIP5Q06214 492 aaPredicted RBP3.64□□□□□ -1.83
SWM2YNR004W WRS1Q12109 432 aaKnown RBP3.64□□□□□ -1.83
SWM2YNR004W YLR149CQ99296 730 aa3.64□□□□□ -1.83
SWM2YNR004W ERG11P10614 530 aa3.63□□□□□ -1.83
SWM2YNR004W GLG1P36143 616 aa3.63□□□□□ -1.83
SWM2YNR004W REV7P38927 245 aa3.63□□□□□ -1.83
SWM2YNR004W ARG2P40360 574 aa3.63□□□□□ -1.83
SWM2YNR004W BUL2Q03758 920 aaKnown RBP3.63□□□□□ -1.83
SWM2YNR004W LCD1Q04377 747 aa3.63□□□□□ -1.83
SWM2YNR004W ATG11Q12527 1178 aa3.63□□□□□ -1.83
SWM2YNR004W REC104P33323 182 aa3.62□□□□□ -1.83
SWM2YNR004W XBP1P40489 647 aa3.62□□□□□ -1.83
SWM2YNR004W OSW7P43611 510 aa3.62□□□□□ -1.83
SWM2YNR004W UBC9P50623 157 aaPredicted RBP3.62□□□□□ -1.83
SWM2YNR004W ORC1P54784 914 aaPredicted RBP3.62□□□□□ -1.83
SWM2YNR004W TDA9Q04545 1251 aa3.62□□□□□ -1.83
SWM2YNR004W PYC1P11154 1178 aaKnown RBP3.61□□□□□ -1.83
SWM2YNR004W SIC1P38634 284 aa3.61□□□□□ -1.83
SWM2YNR004W SSY5P47002 699 aa3.61□□□□□ -1.83
SWM2YNR004W CTR1P49573 406 aa3.61□□□□□ -1.83
SWM2YNR004W MRK1P50873 501 aa3.61□□□□□ -1.83
SWM2YNR004W FPR4Q06205 392 aaPredicted RBP3.61□□□□□ -1.83
SWM2YNR004W CYS3P31373 394 aaKnown RBP3.6□□□□□ -1.83
SWM2YNR004W SPC29P33419 253 aa3.6□□□□□ -1.83
SWM2YNR004W YOR022CQ12204 715 aa3.6□□□□□ -1.83
SWM2YNR004W YKL033W-AQ86ZR7 236 aa3.6□□□□□ -1.83
SWM2YNR004W RSC3Q06639 885 aa3.59□□□□□ -1.83
SWM2YNR004W SPO75Q07798 868 aa3.59□□□□□ -1.83
SWM2YNR004W SLK19Q08581 821 aaKnown RBP3.59□□□□□ -1.83
SWM2YNR004W SIR3P06701 978 aa3.58□□□□□ -1.84
SWM2YNR004W NUP1P20676 1076 aa3.58□□□□□ -1.84
SWM2YNR004W MRP8P35719 219 aa3.58□□□□□ -1.84
SWM2YNR004W VAC8P39968 578 aa3.58□□□□□ -1.84
SWM2YNR004W BAP3P41815 604 aa3.58□□□□□ -1.84
SWM2YNR004W PGK1P00560 416 aaKnown RBP3.57□□□□□ -1.84
SWM2YNR004W PRC1P00729 532 aa3.57□□□□□ -1.84
SWM2YNR004W STI1P15705 589 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
SWM2YNR004W YKL069WP36088 180 aa3.57□□□□□ -1.84
SWM2YNR004W PBY1P38254 753 aa3.57□□□□□ -1.84
SWM2YNR004W UBS1P38290 277 aa3.57□□□□□ -1.84
SWM2YNR004W MUP3P38734 546 aa3.57□□□□□ -1.84
SWM2YNR004W CCT3P39077 534 aaKnown RBP3.57□□□□□ -1.84
SWM2YNR004W GAD1Q04792 585 aa3.57□□□□□ -1.84
SWM2YNR004W CIR2Q08822 631 aa3.57□□□□□ -1.84
SWM2YNR004W CCR4P31384 837 aaKnown RBP3.56□□□□□ -1.84
SWM2YNR004W OCA5P38738 679 aa3.56□□□□□ -1.84
SWM2YNR004W SFB3P38810 929 aa3.56□□□□□ -1.84
SWM2YNR004W RSP5P39940 809 aaKnown RBP3.56□□□□□ -1.84
SWM2YNR004W IRR1P40541 1150 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms