RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C PRO2P54885 456 aaKnown RBP3.5□□□□□ -1.85
SQS1YNL224C SSL1Q04673 461 aaPredicted RBP3.5□□□□□ -1.85
SQS1YNL224C TY3A-GQ12173 290 aa3.5□□□□□ -1.85
SQS1YNL224C LSO2Q3E772 92 aaKnown RBP3.5□□□□□ -1.85
SQS1YNL224C TY3A-IQ99219 290 aa3.5□□□□□ -1.85
SQS1YNL224C RPL8AP17076 256 aaKnown RBP3.5□□□□□ -1.85
SQS1YNL224C TRX1P22217 103 aaKnown RBP3.5□□□□□ -1.85
SQS1YNL224C SLA1P32790 1244 aa3.5□□□□□ -1.85
SQS1YNL224C RDH54P38086 958 aa3.5□□□□□ -1.85
SQS1YNL224C POL12P38121 705 aaPredicted RBP3.5□□□□□ -1.85
SQS1YNL224C TDA3P38758 523 aa3.5□□□□□ -1.85
SQS1YNL224C MBP1P39678 833 aa3.5□□□□□ -1.85
SQS1YNL224C NIT1P40447 199 aa3.5□□□□□ -1.85
SQS1YNL224C YIL161WP40449 235 aaKnown RBP3.5□□□□□ -1.85
SQS1YNL224C URB2P47108 1174 aa3.5□□□□□ -1.85
SQS1YNL224C NIT3P49954 291 aa3.5□□□□□ -1.85
SQS1YNL224C PIP2P52960 996 aa3.5□□□□□ -1.85
SQS1YNL224C GPG1P53130 126 aa3.5□□□□□ -1.85
SQS1YNL224C PIB2P53191 635 aa3.5□□□□□ -1.85
SQS1YNL224C COG2P53271 262 aa3.5□□□□□ -1.85
SQS1YNL224C YNL193WP53870 558 aa3.5□□□□□ -1.85
SQS1YNL224C YNL146WP53906 100 aa3.5□□□□□ -1.85
SQS1YNL224C HMO1Q03973 246 aaKnown RBP3.5□□□□□ -1.85
SQS1YNL224C YLR326WQ06170 240 aaKnown RBP3.5□□□□□ -1.85
SQS1YNL224C VAM6Q07468 1049 aa3.5□□□□□ -1.85
SQS1YNL224C TRE2Q08693 809 aa3.5□□□□□ -1.85
SQS1YNL224C KEL3Q08979 651 aaPredicted RBP3.5□□□□□ -1.85
SQS1YNL224C MAK21Q12176 1025 aaKnown RBP3.5□□□□□ -1.85
SQS1YNL224C NYV1Q12255 253 aa3.5□□□□□ -1.85
SQS1YNL224C PGA3Q12746 312 aaKnown RBP3.5□□□□□ -1.85
SQS1YNL224C STH1P32597 1359 aa3.5□□□□□ -1.85
SQS1YNL224C TRP3P00937 484 aa3.49□□□□□ -1.85
SQS1YNL224C RPS3P05750 240 aaKnown RBP3.49□□□□□ -1.85
SQS1YNL224C FBP1P09201 348 aa3.49□□□□□ -1.85
SQS1YNL224C PRB1P09232 635 aa3.49□□□□□ -1.85
SQS1YNL224C ADH4P10127 382 aa3.49□□□□□ -1.85
SQS1YNL224C SST2P11972 698 aaKnown RBP3.49□□□□□ -1.85
SQS1YNL224C LAT1P12695 482 aaKnown RBP3.49□□□□□ -1.85
SQS1YNL224C SUI2P20459 304 aaKnown RBP3.49□□□□□ -1.85
SQS1YNL224C GUT2P32191 649 aa3.49□□□□□ -1.85
SQS1YNL224C MET4P32389 672 aa3.49□□□□□ -1.85
SQS1YNL224C SSE1P32589 693 aaKnown RBP3.49□□□□□ -1.85
SQS1YNL224C FBP26P32604 452 aa3.49□□□□□ -1.85
SQS1YNL224C ORC2P32833 620 aa3.49□□□□□ -1.85
SQS1YNL224C AFR1P33304 620 aa3.49□□□□□ -1.85
SQS1YNL224C MRP8P35719 219 aa3.49□□□□□ -1.85
SQS1YNL224C ATP3P38077 311 aaKnown RBP3.49□□□□□ -1.85
SQS1YNL224C ERT1P38140 529 aa3.49□□□□□ -1.85
SQS1YNL224C APM3P38153 483 aa3.49□□□□□ -1.85
SQS1YNL224C TIF5P38431 405 aaKnown RBP3.49□□□□□ -1.85
SQS1YNL224C RFC1P38630 861 aaKnown RBP3.49□□□□□ -1.85
SQS1YNL224C MKT1P40850 830 aaKnown RBP3.49□□□□□ -1.85
SQS1YNL224C UPF3P48412 387 aaKnown RBP3.49□□□□□ -1.85
SQS1YNL224C RNR4P49723 345 aaKnown RBP3.49□□□□□ -1.85
SQS1YNL224C ZIP2P53061 704 aa3.49□□□□□ -1.85
SQS1YNL224C PCL10P53124 433 aa3.49□□□□□ -1.85
SQS1YNL224C YBP2P53169 641 aa3.49□□□□□ -1.85
SQS1YNL224C ADY3Q07732 790 aa3.49□□□□□ -1.85
SQS1YNL224C PUF3Q07807 879 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
SQS1YNL224C RRT8Q08219 342 aa3.49□□□□□ -1.85
SQS1YNL224C CAR2P07991 424 aaKnown RBP3.49□□□□□ -1.85
SQS1YNL224C MET3P08536 511 aa3.49□□□□□ -1.85
SQS1YNL224C YAP1P19880 650 aaKnown RBP3.49□□□□□ -1.85
SQS1YNL224C PRP5P21372 849 aaPredicted RBP3.49□□□□□ -1.85
SQS1YNL224C POT1P27796 417 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
SQS1YNL224C MEI4P29467 408 aa3.49□□□□□ -1.85
SQS1YNL224C KNS1P32350 737 aaPredicted RBP3.49□□□□□ -1.85
SQS1YNL224C UBP11P36026 717 aa3.49□□□□□ -1.85
SQS1YNL224C MMS4P38257 691 aa3.49□□□□□ -1.85
SQS1YNL224C YHR054CP38780 354 aa3.49□□□□□ -1.85
SQS1YNL224C RSC30P38781 883 aa3.49□□□□□ -1.85
SQS1YNL224C DYS1P38791 387 aa3.49□□□□□ -1.85
SQS1YNL224C ALB1P47019 175 aaPredicted RBP3.49□□□□□ -1.85
SQS1YNL224C YJL049WP47048 450 aa3.49□□□□□ -1.85
SQS1YNL224C SAM50P53969 484 aa3.49□□□□□ -1.85
SQS1YNL224C ELP4Q02884 456 aaKnown RBP3.49□□□□□ -1.85
SQS1YNL224C EIS1Q05050 843 aaKnown RBP3.49□□□□□ -1.85
SQS1YNL224C YPR204WQ08995 1032 aa3.49□□□□□ -1.85
SQS1YNL224C NSI1Q12457 570 aa3.49□□□□□ -1.85
SQS1YNL224C SSN2P38931 1420 aa3.48□□□□□ -1.85
SQS1YNL224C GCD1P09032 578 aaPredicted RBP3.48□□□□□ -1.85
SQS1YNL224C PUT4P15380 627 aa3.48□□□□□ -1.85
SQS1YNL224C PFK2P16862 959 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
SQS1YNL224C HCA4P20448 770 aaKnown RBP3.48□□□□□ -1.85
SQS1YNL224C YJU2P28320 278 aaPredicted RBP3.48□□□□□ -1.85
SQS1YNL224C KSP1P38691 1029 aaKnown RBP3.48□□□□□ -1.85
SQS1YNL224C PRM9P39551 298 aa3.48□□□□□ -1.85
SQS1YNL224C STL1P39932 569 aa3.48□□□□□ -1.85
SQS1YNL224C YIL077CP40508 320 aa3.48□□□□□ -1.85
SQS1YNL224C ABM1P47146 123 aa3.48□□□□□ -1.85
SQS1YNL224C TOM22P49334 152 aa3.48□□□□□ -1.85
SQS1YNL224C SPC24Q04477 213 aa3.48□□□□□ -1.85
SQS1YNL224C TGS1Q12052 315 aa3.48□□□□□ -1.85
SQS1YNL224C AHC1Q12433 566 aa3.48□□□□□ -1.85
SQS1YNL224C STF1P01098 86 aa3.48□□□□□ -1.85
SQS1YNL224C HXK1P04806 485 aaKnown RBP3.48□□□□□ -1.85
SQS1YNL224C NOT3P06102 836 aaKnown RBP3.48□□□□□ -1.85
SQS1YNL224C PRP16P15938 1071 aaPredicted RBP3.48□□□□□ -1.85
SQS1YNL224C RPC53P25441 422 aa3.48□□□□□ -1.85
SQS1YNL224C SPB1P25582 841 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms