RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W RAD4P14736 754 aa3.96□□□□□ -1.78
DDR48YMR173W PRP4P20053 465 aaKnown RBP3.96□□□□□ -1.78
DDR48YMR173W EMC3P36039 253 aa3.96□□□□□ -1.78
DDR48YMR173W YBR053CP38235 358 aa3.96□□□□□ -1.78
DDR48YMR173W RPP1P38786 293 aa3.96□□□□□ -1.78
DDR48YMR173W PCL5P38794 229 aa3.96□□□□□ -1.78
DDR48YMR173W YJL163CP46996 555 aa3.96□□□□□ -1.78
DDR48YMR173W PUS2P53167 370 aa3.96□□□□□ -1.78
DDR48YMR173W NOP7P53261 605 aaKnown RBP3.96□□□□□ -1.78
DDR48YMR173W TAF8Q03750 510 aa3.96□□□□□ -1.78
DDR48YMR173W ARO10Q06408 635 aa3.96□□□□□ -1.78
DDR48YMR173W YPR071WQ12346 211 aa3.96□□□□□ -1.78
DDR48YMR173W OSH2Q12451 1283 aa3.96□□□□□ -1.78
DDR48YMR173W CIT1P00890 479 aa3.95□□□□□ -1.78
DDR48YMR173W MET6P05694 767 aaKnown RBP3.95□□□□□ -1.78
DDR48YMR173W CDC43P18898 376 aa3.95□□□□□ -1.78
DDR48YMR173W HSP60P19882 572 aaKnown RBP3.95□□□□□ -1.78
DDR48YMR173W TMT1P32643 299 aa3.95□□□□□ -1.78
DDR48YMR173W YHR020WP38708 688 aaKnown RBP3.95□□□□□ -1.78
DDR48YMR173W YHR078WP38799 552 aa3.95□□□□□ -1.78
DDR48YMR173W UBP6P43593 499 aaKnown RBP3.95□□□□□ -1.78
DDR48YMR173W NOG2P53742 486 aaKnown RBP3.95□□□□□ -1.78
DDR48YMR173W THI7Q05998 598 aa3.95□□□□□ -1.78
DDR48YMR173W UBX5Q06682 500 aa3.95□□□□□ -1.78
DDR48YMR173W KIN3P22209 435 aa3.94□□□□□ -1.78
DDR48YMR173W ARE1P25628 610 aa3.94□□□□□ -1.78
DDR48YMR173W YBR284WP38150 797 aa3.94□□□□□ -1.78
DDR48YMR173W ASI2P53895 289 aa3.94□□□□□ -1.78
DDR48YMR173W CRR1Q05790 422 aa3.94□□□□□ -1.78
DDR48YMR173W TOP3P13099 656 aa3.93□□□□□ -1.78
DDR48YMR173W ADY2P25613 283 aa3.93□□□□□ -1.78
DDR48YMR173W YIL166CP40445 542 aa3.93□□□□□ -1.78
DDR48YMR173W NIT3P49954 291 aa3.93□□□□□ -1.78
DDR48YMR173W YGR283CP53336 341 aaPredicted RBP3.93□□□□□ -1.78
DDR48YMR173W RIA1P53893 1110 aa3.93□□□□□ -1.78
DDR48YMR173W GGA2P38817 585 aaKnown RBP3.92□□□□□ -1.78
DDR48YMR173W TIM54P47045 478 aa3.92□□□□□ -1.78
DDR48YMR173W AMA1P50082 593 aa3.92□□□□□ -1.78
DDR48YMR173W DAM1P53267 343 aa3.92□□□□□ -1.78
DDR48YMR173W DUS1P53759 423 aaKnown RBP3.92□□□□□ -1.78
DDR48YMR173W YDL124WQ07551 312 aaKnown RBP3.92□□□□□ -1.78
DDR48YMR173W CYS3P31373 394 aaKnown RBP3.91□□□□□ -1.78
DDR48YMR173W VHR1P40522 640 aa3.91□□□□□ -1.78
DDR48YMR173W HUL4P40985 892 aa3.91□□□□□ -1.78
DDR48YMR173W YGR125WP53273 1036 aa3.91□□□□□ -1.78
DDR48YMR173W ATP25Q03153 612 aa3.91□□□□□ -1.78
DDR48YMR173W PKH1Q03407 766 aa3.91□□□□□ -1.78
DDR48YMR173W REH1Q06709 432 aa3.91□□□□□ -1.78
DDR48YMR173W FLC1Q08967 793 aa3.91□□□□□ -1.78
DDR48YMR173W THI21Q08975 551 aa3.91□□□□□ -1.78
DDR48YMR173W NGG1P32494 702 aa3.9□□□□□ -1.79
DDR48YMR173W BET3P36149 193 aa3.9□□□□□ -1.79
DDR48YMR173W GYP8P43570 497 aa3.9□□□□□ -1.79
DDR48YMR173W IRC13Q08630 104 aa3.9□□□□□ -1.79
DDR48YMR173W HAL9Q12180 1030 aa3.9□□□□□ -1.79
DDR48YMR173W DAL7P21826 554 aa3.89□□□□□ -1.79
DDR48YMR173W PZF1P39933 429 aa3.89□□□□□ -1.79
DDR48YMR173W ALG2P43636 503 aa3.89□□□□□ -1.79
DDR48YMR173W GLO1P50107 326 aa3.89□□□□□ -1.79
DDR48YMR173W TAD1P53065 400 aa3.89□□□□□ -1.79
DDR48YMR173W YLR415CO13578 112 aa3.88□□□□□ -1.79
DDR48YMR173W CAN1P04817 590 aa3.88□□□□□ -1.79
DDR48YMR173W SIC1P38634 284 aa3.88□□□□□ -1.79
DDR48YMR173W RSP5P39940 809 aaKnown RBP3.88□□□□□ -1.79
DDR48YMR173W HXT16P47185 567 aa3.88□□□□□ -1.79
DDR48YMR173W RTA1P53047 317 aa3.88□□□□□ -1.79
DDR48YMR173W HUL5P53119 910 aa3.88□□□□□ -1.79
DDR48YMR173W MUS81Q04149 632 aaPredicted RBP3.88□□□□□ -1.79
DDR48YMR173W SGO1Q08490 590 aa3.88□□□□□ -1.79
DDR48YMR173W YOR022CQ12204 715 aa3.88□□□□□ -1.79
DDR48YMR173W GPR1Q12361 961 aa3.88□□□□□ -1.79
DDR48YMR173W PRC1P00729 532 aa3.87□□□□□ -1.79
DDR48YMR173W TOM70P07213 617 aaKnown RBP3.87□□□□□ -1.79
DDR48YMR173W STI1P15705 589 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
DDR48YMR173W GAL11P19659 1081 aa3.87□□□□□ -1.79
DDR48YMR173W YIR042CP40586 236 aa3.87□□□□□ -1.79
DDR48YMR173W SSY5P47002 699 aa3.87□□□□□ -1.79
DDR48YMR173W NNF1P47149 201 aa3.87□□□□□ -1.79
DDR48YMR173W SEC5P89102 971 aa3.87□□□□□ -1.79
DDR48YMR173W LRS4Q04087 347 aaKnown RBP3.87□□□□□ -1.79
DDR48YMR173W NSE3Q05541 303 aa3.87□□□□□ -1.79
DDR48YMR173W ATG11Q12527 1178 aa3.87□□□□□ -1.79
DDR48YMR173W YBR182C-AQ8TGU6 64 aa3.87□□□□□ -1.79
DDR48YMR173W DMC1P25453 334 aa3.86□□□□□ -1.79
DDR48YMR173W SPC29P33419 253 aa3.86□□□□□ -1.79
DDR48YMR173W SAP190P36123 1033 aa3.86□□□□□ -1.79
DDR48YMR173W CBR1P38626 284 aaKnown RBP3.86□□□□□ -1.79
DDR48YMR173W SET5P38890 526 aaKnown RBP3.86□□□□□ -1.79
DDR48YMR173W SAK1P38990 1142 aa3.86□□□□□ -1.79
DDR48YMR173W ECM1P39715 212 aa3.86□□□□□ -1.79
DDR48YMR173W PFA3P42836 336 aa3.86□□□□□ -1.79
DDR48YMR173W NRG1Q03125 231 aa3.86□□□□□ -1.79
DDR48YMR173W YDR514CQ04408 483 aa3.86□□□□□ -1.79
DDR48YMR173W RSC3Q06639 885 aa3.86□□□□□ -1.79
DDR48YMR173W LAT1P12695 482 aaKnown RBP3.85□□□□□ -1.79
DDR48YMR173W YCL002CP25565 263 aa3.85□□□□□ -1.79
DDR48YMR173W EMP70P32802 667 aa3.85□□□□□ -1.79
DDR48YMR173W FMP52P40008 231 aa3.85□□□□□ -1.79
DDR48YMR173W TY4A-JP47023 414 aa3.85□□□□□ -1.79
DDR48YMR173W SSL2Q00578 843 aa3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms