RNA–Protein interactions for RNA: YMR016C

SOK2, Transcript of Nuclear protein that negatively regulates pseudohyphal differentiation, yeastyeast

Gene SOK2, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK2YMR016C DNF2Q12675 1612 aa2.88□□□□□ -1.95
SOK2YMR016C NTE1Q04958 1679 aa2.87□□□□□ -1.95
SOK2YMR016C CAD1P24813 409 aaKnown RBP2.87□□□□□ -1.95
SOK2YMR016C TSR4P25040 408 aa2.87□□□□□ -1.95
SOK2YMR016C ERG4P25340 473 aa2.87□□□□□ -1.95
SOK2YMR016C CUE2P36075 443 aaKnown RBP2.87□□□□□ -1.95
SOK2YMR016C TOK1P40310 691 aa2.87□□□□□ -1.95
SOK2YMR016C LAS17Q12446 633 aa2.87□□□□□ -1.95
SOK2YMR016C TRP4P07285 380 aaPredicted RBP2.87□□□□□ -1.95
SOK2YMR016C GAL11P19659 1081 aa2.87□□□□□ -1.95
SOK2YMR016C GGA2P38817 585 aaKnown RBP2.87□□□□□ -1.95
SOK2YMR016C BUL1P48524 976 aa2.87□□□□□ -1.95
SOK2YMR016C RNT1Q02555 471 aa2.87□□□□□ -1.95
SOK2YMR016C GIC1P38785 314 aa2.86□□□□□ -1.95
SOK2YMR016C POB3Q04636 552 aaKnown RBP2.86□□□□□ -1.95
SOK2YMR016C YDR306CQ06640 478 aa2.86□□□□□ -1.95
SOK2YMR016C CDC9P04819 755 aa2.86□□□□□ -1.95
SOK2YMR016C PRP9P19736 530 aaKnown RBP2.86□□□□□ -1.95
SOK2YMR016C PCL2P25693 308 aa2.86□□□□□ -1.95
SOK2YMR016C HXT16P47185 567 aa2.86□□□□□ -1.95
SOK2YMR016C STB4P50104 949 aa2.86□□□□□ -1.95
SOK2YMR016C UGO1Q03327 502 aa2.86□□□□□ -1.95
SOK2YMR016C ADR1P07248 1323 aa2.85□□□□□ -1.95
SOK2YMR016C SPC29P33419 253 aa2.85□□□□□ -1.95
SOK2YMR016C HUL4P40985 892 aa2.85□□□□□ -1.95
SOK2YMR016C TFB2Q02939 513 aa2.85□□□□□ -1.95
SOK2YMR016C DUS3Q06053 668 aaKnown RBP2.85□□□□□ -1.95
SOK2YMR016C PDR15Q04182 1529 aaKnown RBP2.85□□□□□ -1.95
SOK2YMR016C KRI1P42846 591 aaKnown RBP2.85□□□□□ -1.95
SOK2YMR016C YJR120WP47157 116 aa2.85□□□□□ -1.95
SOK2YMR016C YGR283CP53336 341 aaPredicted RBP2.85□□□□□ -1.95
SOK2YMR016C SFB2P53953 876 aa2.85□□□□□ -1.95
SOK2YMR016C SRP1Q02821 542 aaKnown RBP2.85□□□□□ -1.95
SOK2YMR016C ENV7Q12003 364 aa2.85□□□□□ -1.95
SOK2YMR016C PPR1P07272 904 aaPredicted RBP2.84□□□□□ -1.95
SOK2YMR016C SED4P25365 1065 aa2.84□□□□□ -1.95
SOK2YMR016C VBA3P25594 458 aa2.84□□□□□ -1.95
SOK2YMR016C MTC2P34246 357 aa2.84□□□□□ -1.95
SOK2YMR016C SAH1P39954 449 aaKnown RBP2.84□□□□□ -1.95
SOK2YMR016C YEN1P40028 759 aa2.84□□□□□ -1.95
SOK2YMR016C MGS1P40151 587 aa2.84□□□□□ -1.95
SOK2YMR016C YNL193WP53870 558 aa2.84□□□□□ -1.95
SOK2YMR016C LGE1Q02796 332 aaKnown RBP2.84□□□□□ -1.95
SOK2YMR016C UPC2Q12151 913 aa2.84□□□□□ -1.95
SOK2YMR016C SIN3P22579 1536 aa2.84□□□□□ -1.96
SOK2YMR016C PEX6P33760 1030 aa2.83□□□□□ -1.96
SOK2YMR016C MCD4P36051 919 aa2.83□□□□□ -1.96
SOK2YMR016C YBR238CP38330 731 aaKnown RBP2.83□□□□□ -1.96
SOK2YMR016C SRD1P09007 221 aa2.83□□□□□ -1.96
SOK2YMR016C CRP1P38845 465 aaKnown RBP2.83□□□□□ -1.96
SOK2YMR016C TGL2P54857 326 aa2.83□□□□□ -1.96
SOK2YMR016C LCD1Q04377 747 aa2.83□□□□□ -1.96
SOK2YMR016C YDL124WQ07551 312 aaKnown RBP2.83□□□□□ -1.96
SOK2YMR016C HBT1Q07653 1046 aaKnown RBP2.83□□□□□ -1.96
SOK2YMR016C WHI4Q07655 649 aaKnown RBP2.83□□□□□ -1.96
SOK2YMR016C NDJ1Q12366 352 aa2.83□□□□□ -1.96
SOK2YMR016C YGR161W-CQ3E744 92 aa2.83□□□□□ -1.96
SOK2YMR016C SSB1P11484 613 aaKnown RBP2.82□□□□□ -1.96
SOK2YMR016C MTH1P35198 433 aa2.82□□□□□ -1.96
SOK2YMR016C PAF1P38351 445 aa2.82□□□□□ -1.96
SOK2YMR016C SSB2P40150 613 aaKnown RBP2.82□□□□□ -1.96
SOK2YMR016C ALG7P07286 448 aa2.82□□□□□ -1.96
SOK2YMR016C CDC11P32458 415 aa2.82□□□□□ -1.96
SOK2YMR016C TOM20P35180 183 aa2.82□□□□□ -1.96
SOK2YMR016C GPP1P41277 250 aaKnown RBP2.82□□□□□ -1.96
SOK2YMR016C ALG2P43636 503 aa2.82□□□□□ -1.96
SOK2YMR016C MET13P53128 600 aa2.82□□□□□ -1.96
SOK2YMR016C YMR206WQ03695 313 aa2.82□□□□□ -1.96
SOK2YMR016C TOM70P07213 617 aaKnown RBP2.81□□□□□ -1.96
SOK2YMR016C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
SOK2YMR016C YCL002CP25565 263 aa2.81□□□□□ -1.96
SOK2YMR016C AAR2P32357 355 aaPredicted RBP2.81□□□□□ -1.96
SOK2YMR016C DAS1P47005 663 aa2.81□□□□□ -1.96
SOK2YMR016C YJR008WP47085 338 aa2.81□□□□□ -1.96
SOK2YMR016C GYP7P48365 746 aa2.81□□□□□ -1.96
SOK2YMR016C RAI1P53063 387 aaKnown RBP2.81□□□□□ -1.96
SOK2YMR016C FOL1P53848 824 aa2.81□□□□□ -1.96
SOK2YMR016C ATP25Q03153 612 aa2.81□□□□□ -1.96
SOK2YMR016C RSC3Q06639 885 aa2.81□□□□□ -1.96
SOK2YMR016C THI73Q07904 523 aa2.81□□□□□ -1.96
SOK2YMR016C PHR1P05066 565 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
SOK2YMR016C YKR078WP36158 585 aaKnown RBP2.81□□□□□ -1.96
SOK2YMR016C YRO2P38079 344 aa2.81□□□□□ -1.96
SOK2YMR016C PCM1P38628 557 aaKnown RBP2.81□□□□□ -1.96
SOK2YMR016C GND2P53319 492 aa2.81□□□□□ -1.96
SOK2YMR016C UTP14Q04500 899 aaKnown RBP2.81□□□□□ -1.96
SOK2YMR016C YDR338CQ05497 695 aa2.81□□□□□ -1.96
SOK2YMR016C YPR196WQ06595 470 aa2.81□□□□□ -1.96
SOK2YMR016C GPR1Q12361 961 aa2.81□□□□□ -1.96
SOK2YMR016C STE14P32584 239 aa2.8□□□□□ -1.96
SOK2YMR016C REC104P33323 182 aa2.8□□□□□ -1.96
SOK2YMR016C YER158CP40095 573 aa2.8□□□□□ -1.96
SOK2YMR016C HDA1P53973 706 aa2.8□□□□□ -1.96
SOK2YMR016C LRS4Q04087 347 aaKnown RBP2.8□□□□□ -1.96
SOK2YMR016C SGS1P35187 1447 aa2.8□□□□□ -1.96
SOK2YMR016C CAF16P43569 289 aa2.8□□□□□ -1.96
SOK2YMR016C MUK1Q02866 612 aa2.8□□□□□ -1.96
SOK2YMR016C YBR182C-AQ8TGU6 64 aa2.8□□□□□ -1.96
SOK2YMR016C MET3P08536 511 aa2.79□□□□□ -1.96
SOK2YMR016C FBP1P09201 348 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms