RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W GUS1P46655 708 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
PRP39YML046W UBC11P52492 156 aa2.39□□□□□ -2.03
PRP39YML046W SLK19Q08581 821 aaKnown RBP2.39□□□□□ -2.03
PRP39YML046W ABD1P32783 436 aaPredicted RBP2.38□□□□□ -2.03
PRP39YML046W GLG1P36143 616 aa2.38□□□□□ -2.03
PRP39YML046W ARG2P40360 574 aa2.38□□□□□ -2.03
PRP39YML046W YJR107WP47145 328 aa2.38□□□□□ -2.03
PRP39YML046W GIS2P53849 153 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
PRP39YML046W NUP1P20676 1076 aa2.37□□□□□ -2.03
PRP39YML046W HOS4P40480 1083 aa2.37□□□□□ -2.03
PRP39YML046W CTR1P49573 406 aa2.37□□□□□ -2.03
PRP39YML046W UBC9P50623 157 aaPredicted RBP2.37□□□□□ -2.03
PRP39YML046W RMD1Q03441 430 aa2.37□□□□□ -2.03
PRP39YML046W RPS9AO13516 197 aaKnown RBP2.37□□□□□ -2.03
PRP39YML046W URA1P28272 314 aaPredicted RBP2.37□□□□□ -2.03
PRP39YML046W HIR1P32479 840 aa2.37□□□□□ -2.03
PRP39YML046W PET112P33893 541 aa2.37□□□□□ -2.03
PRP39YML046W PZF1P39933 429 aa2.37□□□□□ -2.03
PRP39YML046W POL32P47110 350 aa2.37□□□□□ -2.03
PRP39YML046W HDA1P53973 706 aa2.37□□□□□ -2.03
PRP39YML046W YDR306CQ06640 478 aa2.37□□□□□ -2.03
PRP39YML046W YLR415CO13578 112 aa2.36□□□□□ -2.03
PRP39YML046W SPC29P33419 253 aa2.36□□□□□ -2.03
PRP39YML046W REV7P38927 245 aa2.36□□□□□ -2.03
PRP39YML046W KRI1P42846 591 aaKnown RBP2.36□□□□□ -2.03
PRP39YML046W TGL5Q12043 749 aa2.36□□□□□ -2.03
PRP39YML046W ADE8P04161 214 aa2.35□□□□□ -2.03
PRP39YML046W AFR1P33304 620 aa2.35□□□□□ -2.03
PRP39YML046W YPL068CQ02749 293 aa2.35□□□□□ -2.03
PRP39YML046W MUS81Q04149 632 aaPredicted RBP2.35□□□□□ -2.03
PRP39YML046W GEP3Q08622 556 aa2.35□□□□□ -2.03
PRP39YML046W ATG11Q12527 1178 aa2.35□□□□□ -2.03
PRP39YML046W PYC1P11154 1178 aaKnown RBP2.35□□□□□ -2.03
PRP39YML046W MUP3P38734 546 aa2.35□□□□□ -2.03
PRP39YML046W YRO2P38079 344 aa2.34□□□□□ -2.03
PRP39YML046W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
PRP39YML046W CCM1P48237 864 aaPredicted RBP2.34□□□□□ -2.03
PRP39YML046W DUS1P53759 423 aaKnown RBP2.34□□□□□ -2.03
PRP39YML046W VPS16Q03308 798 aa2.34□□□□□ -2.03
PRP39YML046W SIR3P06701 978 aa2.33□□□□□ -2.04
PRP39YML046W SBA1P28707 216 aaKnown RBP2.33□□□□□ -2.04
PRP39YML046W AAR2P32357 355 aaPredicted RBP2.33□□□□□ -2.04
PRP39YML046W UBS1P38290 277 aa2.33□□□□□ -2.04
PRP39YML046W SAK1P38990 1142 aa2.33□□□□□ -2.04
PRP39YML046W STP1Q00947 519 aa2.33□□□□□ -2.04
PRP39YML046W PHR1P05066 565 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
PRP39YML046W ATE1P16639 503 aa2.33□□□□□ -2.04
PRP39YML046W CCR4P31384 837 aaKnown RBP2.33□□□□□ -2.04
PRP39YML046W SLD2P34252 453 aa2.33□□□□□ -2.04
PRP39YML046W SIC1P38634 284 aa2.33□□□□□ -2.04
PRP39YML046W PFA3P42836 336 aa2.33□□□□□ -2.04
PRP39YML046W YKL033W-AQ86ZR7 236 aa2.33□□□□□ -2.04
PRP39YML046W APN1P22936 367 aa2.32□□□□□ -2.04
PRP39YML046W FMP30Q02883 468 aa2.32□□□□□ -2.04
PRP39YML046W BAP3P41815 604 aa2.31□□□□□ -2.04
PRP39YML046W HAL9Q12180 1030 aa2.31□□□□□ -2.04
PRP39YML046W RPA135P22138 1203 aaKnown RBP2.31□□□□□ -2.04
PRP39YML046W AGP1P25376 633 aa2.31□□□□□ -2.04
PRP39YML046W ERT1P38140 529 aa2.31□□□□□ -2.04
PRP39YML046W CCT3P39077 534 aaKnown RBP2.31□□□□□ -2.04
PRP39YML046W SIT1P39980 628 aa2.31□□□□□ -2.04
PRP39YML046W SSY5P47002 699 aa2.31□□□□□ -2.04
PRP39YML046W TPO2P53283 614 aa2.31□□□□□ -2.04
PRP39YML046W ATG4P53867 494 aa2.31□□□□□ -2.04
PRP39YML046W SEN54Q02825 467 aaPredicted RBP2.31□□□□□ -2.04
PRP39YML046W MNR2P35724 969 aa2.3□□□□□ -2.04
PRP39YML046W PAN2P53010 1115 aaPredicted RBP2.3□□□□□ -2.04
PRP39YML046W SFB3P38810 929 aa2.29□□□□□ -2.04
PRP39YML046W ULP2P40537 1034 aaPredicted RBP2.29□□□□□ -2.04
PRP39YML046W GAD1Q04792 585 aa2.29□□□□□ -2.04
PRP39YML046W IRC8P47046 822 aa2.28□□□□□ -2.04
PRP39YML046W NEW1Q08972 1196 aaKnown RBP2.28□□□□□ -2.04
PRP39YML046W TOK1P40310 691 aa2.28□□□□□ -2.04
PRP39YML046W PSA1P41940 361 aaKnown RBP2.28□□□□□ -2.04
PRP39YML046W FAA4P47912 694 aaKnown RBP2.28□□□□□ -2.04
PRP39YML046W MLH3Q12083 715 aa2.28□□□□□ -2.04
PRP39YML046W FAL1Q12099 399 aaKnown RBP2.28□□□□□ -2.04
PRP39YML046W MBR1P23493 339 aa2.27□□□□□ -2.05
PRP39YML046W CYS3P31373 394 aaKnown RBP2.27□□□□□ -2.05
PRP39YML046W MVD1P32377 396 aaKnown RBP2.27□□□□□ -2.05
PRP39YML046W REC104P33323 182 aa2.27□□□□□ -2.05
PRP39YML046W VBA5P36172 582 aa2.27□□□□□ -2.05
PRP39YML046W YBR259WP38338 688 aa2.27□□□□□ -2.05
PRP39YML046W CCT4P39078 528 aaKnown RBP2.27□□□□□ -2.05
PRP39YML046W TEX1P53851 422 aaKnown RBP2.27□□□□□ -2.05
PRP39YML046W BUL2Q03758 920 aaKnown RBP2.27□□□□□ -2.05
PRP39YML046W LCD1Q04377 747 aa2.27□□□□□ -2.05
PRP39YML046W RSC3Q06639 885 aa2.27□□□□□ -2.05
PRP39YML046W YOR022CQ12204 715 aa2.27□□□□□ -2.05
PRP39YML046W TAX4P47030 604 aa2.26□□□□□ -2.05
PRP39YML046W FHN1P53279 174 aa2.26□□□□□ -2.05
PRP39YML046W ADE5,7P07244 802 aaKnown RBP2.26□□□□□ -2.05
PRP39YML046W PHO11P35842 467 aa2.26□□□□□ -2.05
PRP39YML046W PHO12P38693 467 aa2.26□□□□□ -2.05
PRP39YML046W GDE1Q02979 1223 aa2.26□□□□□ -2.05
PRP39YML046W EAF1Q06337 982 aa2.26□□□□□ -2.05
PRP39YML046W RRP15Q06511 250 aaPredicted RBP2.26□□□□□ -2.05
PRP39YML046W PRC1P00729 532 aa2.25□□□□□ -2.05
PRP39YML046W STE12P13574 688 aa2.25□□□□□ -2.05
PRP39YML046W SAT4P25333 603 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 173.3 ms