RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W SPT2P06843 333 aaPredicted RBP10.78□□□□□ -0.68
SHH4YLR164W SEC23P15303 768 aaKnown RBP10.78□□□□□ -0.68
SHH4YLR164W SCJ1P25303 377 aa10.78□□□□□ -0.68
SHH4YLR164W KIP1P28742 1111 aa10.78□□□□□ -0.68
SHH4YLR164W TRZ1P36159 838 aaPredicted RBP10.78□□□□□ -0.68
SHH4YLR164W MRX3P38172 270 aa10.78□□□□□ -0.68
SHH4YLR164W EFM4P40516 257 aa10.78□□□□□ -0.68
SHH4YLR164W SCD6P45978 349 aaKnown RBP RIP-Chip data10.78□□□□□ -0.68not detected
SHH4YLR164W CPR7P47103 393 aa10.78□□□□□ -0.68
SHH4YLR164W VPS70P47161 811 aa10.78□□□□□ -0.68
SHH4YLR164W COS5P47187 383 aa10.78□□□□□ -0.68
SHH4YLR164W SHE10P53075 577 aa10.78□□□□□ -0.68
SHH4YLR164W YML082WQ04533 649 aaKnown RBP10.78□□□□□ -0.68
SHH4YLR164W YDR524C-BQ3E6R4 66 aa10.78□□□□□ -0.68
SHH4YLR164W PET123P17558 318 aa10.77□□□□□ -0.69
SHH4YLR164W GLN3P18494 730 aa10.77□□□□□ -0.69
SHH4YLR164W DAL2P25335 343 aa10.77□□□□□ -0.69
SHH4YLR164W PRR1P28708 518 aa10.77□□□□□ -0.69
SHH4YLR164W CBF2P32504 956 aa10.77□□□□□ -0.69
SHH4YLR164W SWI3P32591 825 aa10.77□□□□□ -0.69
SHH4YLR164W JNM1P36224 373 aa10.77□□□□□ -0.69
SHH4YLR164W MMS4P38257 691 aa10.77□□□□□ -0.69
SHH4YLR164W UBX7P38349 436 aa10.77□□□□□ -0.69
SHH4YLR164W ESBP6P53918 673 aa10.77□□□□□ -0.69
SHH4YLR164W DOT1Q04089 582 aaKnown RBP10.77□□□□□ -0.69
SHH4YLR164W IWR1Q07532 353 aaPredicted RBP10.77□□□□□ -0.69
SHH4YLR164W ADE2P21264 571 aaKnown RBP10.76□□□□□ -0.69
SHH4YLR164W DRE2P36152 348 aa10.76□□□□□ -0.69
SHH4YLR164W LDH1P38139 375 aa10.76□□□□□ -0.69
SHH4YLR164W YMR124WP39523 943 aaKnown RBP10.76□□□□□ -0.69
SHH4YLR164W DAS1P47005 663 aa10.76□□□□□ -0.69
SHH4YLR164W APT1P49435 187 aaKnown RBP10.76□□□□□ -0.69
SHH4YLR164W SOV1Q04748 898 aa10.76□□□□□ -0.69
SHH4YLR164W ASP3-2P0CX77 362 aa10.75□□□□□ -0.69
SHH4YLR164W ASP3-3P0CX78 362 aa10.75□□□□□ -0.69
SHH4YLR164W ASP3-4P0CX79 362 aa10.75□□□□□ -0.69
SHH4YLR164W ASP3-1P0CZ17 362 aa10.75□□□□□ -0.69
SHH4YLR164W RRT12P25381 491 aa10.75□□□□□ -0.69
SHH4YLR164W SGM1P47166 707 aa10.75□□□□□ -0.69
SHH4YLR164W BOP3P53958 396 aa10.75□□□□□ -0.69
SHH4YLR164W SNU56Q03782 492 aaKnown RBP10.75□□□□□ -0.69
SHH4YLR164W UTP5Q04177 643 aaKnown RBP10.75□□□□□ -0.69
SHH4YLR164W MCM16Q12262 181 aa10.75□□□□□ -0.69
SHH4YLR164W ERG11P10614 530 aa10.74□□□□□ -0.69
SHH4YLR164W SKG6P32900 734 aaPredicted RBP10.74□□□□□ -0.69
SHH4YLR164W RPT1P33299 467 aaKnown RBP10.74□□□□□ -0.69
SHH4YLR164W EXO5P38289 585 aa10.74□□□□□ -0.69
SHH4YLR164W SMC2P38989 1170 aaKnown RBP10.74□□□□□ -0.69
SHH4YLR164W FTR1P40088 404 aa10.74□□□□□ -0.69
SHH4YLR164W YNL115CP53925 644 aa10.74□□□□□ -0.69
SHH4YLR164W RPA49Q01080 415 aaPredicted RBP10.74□□□□□ -0.69
SHH4YLR164W ABP140Q08641 628 aaKnown RBP10.74□□□□□ -0.69
SHH4YLR164W GIS3Q12418 502 aa10.74□□□□□ -0.69
SHH4YLR164W RNR1P21524 888 aaKnown RBP10.73□□□□□ -0.69
SHH4YLR164W POT1P27796 417 aaKnown RBP RIP-Chip data10.73□□□□□ -0.69not detected
SHH4YLR164W HXT1P32465 570 aa10.73□□□□□ -0.69
SHH4YLR164W CSG2P35206 410 aa10.73□□□□□ -0.69
SHH4YLR164W MCX1P38323 520 aaPredicted RBP10.73□□□□□ -0.69
SHH4YLR164W ALD5P40047 520 aaKnown RBP10.73□□□□□ -0.69
SHH4YLR164W YER186CP40101 306 aa10.73□□□□□ -0.69
SHH4YLR164W DIG1Q03063 452 aaKnown RBP10.73□□□□□ -0.69
SHH4YLR164W YDR278CQ05612 105 aa10.73□□□□□ -0.69
SHH4YLR164W ESC2Q06340 456 aa10.73□□□□□ -0.69
SHH4YLR164W CDD1Q06549 142 aa10.73□□□□□ -0.69
SHH4YLR164W RIF1P29539 1916 aa10.72□□□□□ -0.69
SHH4YLR164W CDC33P07260 213 aaKnown RBP10.72□□□□□ -0.69
SHH4YLR164W NAT1P12945 854 aaKnown RBP10.72□□□□□ -0.69
SHH4YLR164W YKL050CP35736 922 aa10.72□□□□□ -0.69
SHH4YLR164W TCD1P38756 429 aa10.72□□□□□ -0.69
SHH4YLR164W HXT8P40886 569 aa10.72□□□□□ -0.69
SHH4YLR164W LAM5P43560 674 aa10.72□□□□□ -0.69
SHH4YLR164W NGL3Q03210 505 aa10.72□□□□□ -0.69
SHH4YLR164W OPY2Q06810 360 aa10.72□□□□□ -0.69
SHH4YLR164W PCD1Q12524 340 aa10.72□□□□□ -0.69
SHH4YLR164W ECM3Q99252 613 aa10.72□□□□□ -0.69
SHH4YLR164W AI5_BETAQ9ZZX0 354 aa10.72□□□□□ -0.69
SHH4YLR164W YAP1801P38856 637 aa10.71□□□□□ -0.69
SHH4YLR164W CAJ1P39101 391 aa10.71□□□□□ -0.69
SHH4YLR164W SBE2P42223 864 aaKnown RBP10.71□□□□□ -0.69
SHH4YLR164W GCV2P49095 1034 aa10.71□□□□□ -0.69
SHH4YLR164W STB4P50104 949 aa10.71□□□□□ -0.69
SHH4YLR164W ALG11P53954 548 aaKnown RBP10.71□□□□□ -0.69
SHH4YLR164W PIB1Q06651 286 aa10.71□□□□□ -0.69
SHH4YLR164W VAC14Q06708 880 aa10.71□□□□□ -0.69
SHH4YLR164W DAS2Q12084 232 aa10.71□□□□□ -0.69
SHH4YLR164W CAD1P24813 409 aaKnown RBP10.7□□□□□ -0.7
SHH4YLR164W TRM2P33753 639 aa10.7□□□□□ -0.7
SHH4YLR164W BCH2P36122 765 aa10.7□□□□□ -0.7
SHH4YLR164W AGP2P38090 596 aa10.7□□□□□ -0.7
SHH4YLR164W PHO86P46956 311 aa10.7□□□□□ -0.7
SHH4YLR164W STE20Q03497 939 aaKnown RBP10.7□□□□□ -0.7
SHH4YLR164W SML1Q04964 104 aa10.7□□□□□ -0.7
SHH4YLR164W ECM30Q06673 1274 aa10.7□□□□□ -0.7
SHH4YLR164W SGT2Q12118 346 aaKnown RBP10.7□□□□□ -0.7
SHH4YLR164W YOR022CQ12204 715 aa10.7□□□□□ -0.7
SHH4YLR164W COX11P19516 300 aaKnown RBP10.69□□□□□ -0.7
SHH4YLR164W PAP1P29468 568 aaKnown RBP10.69□□□□□ -0.7
SHH4YLR164W YHL026CP38740 315 aa10.69□□□□□ -0.7
SHH4YLR164W YHR054CP38780 354 aa10.69□□□□□ -0.7
SHH4YLR164W DYS1P38791 387 aa10.69□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms