RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C YGR012WP53206 393 aa2.8□□□□□ -1.96
UBP11YKR098C ENV11P53246 860 aa2.8□□□□□ -1.96
UBP11YKR098C PBP1P53297 722 aaKnown RBP2.8□□□□□ -1.96
UBP11YKR098C VPS30Q02948 557 aa2.8□□□□□ -1.96
UBP11YKR098C RPN7Q06103 429 aaKnown RBP2.8□□□□□ -1.96
UBP11YKR098C BUD21Q08492 214 aaPredicted RBP2.8□□□□□ -1.96
UBP11YKR098C PHM7Q12252 991 aa2.8□□□□□ -1.96
UBP11YKR098C YLR122CQ12312 125 aa2.8□□□□□ -1.96
UBP11YKR098C YLR149CQ99296 730 aa2.8□□□□□ -1.96
UBP11YKR098C FBP1P09201 348 aa2.79□□□□□ -1.96
UBP11YKR098C RPS21AP0C0V8 87 aaKnown RBP2.79□□□□□ -1.96
UBP11YKR098C HSF1P10961 833 aa2.79□□□□□ -1.96
UBP11YKR098C KAR1P11927 433 aa2.79□□□□□ -1.96
UBP11YKR098C ENA1P13587 1091 aa2.79□□□□□ -1.96
UBP11YKR098C YEF3P16521 1044 aaKnown RBP2.79□□□□□ -1.96
UBP11YKR098C COQ2P32378 372 aa2.79□□□□□ -1.96
UBP11YKR098C MNN4P36044 1178 aa2.79□□□□□ -1.96
UBP11YKR098C YKR018CP36114 725 aa2.79□□□□□ -1.96
UBP11YKR098C BIT2P38346 545 aa2.79□□□□□ -1.96
UBP11YKR098C PIP2P52960 996 aa2.79□□□□□ -1.96
UBP11YKR098C ZIP2P53061 704 aa2.79□□□□□ -1.96
UBP11YKR098C ENA2Q01896 1091 aa2.79□□□□□ -1.96
UBP11YKR098C MET14Q02196 202 aa2.79□□□□□ -1.96
UBP11YKR098C RSM24Q03976 319 aa2.79□□□□□ -1.96
UBP11YKR098C DCS2Q12123 353 aa2.79□□□□□ -1.96
UBP11YKR098C ENA5Q12691 1091 aa2.79□□□□□ -1.96
UBP11YKR098C YPR053CQ6Q5F3 151 aa2.79□□□□□ -1.96
UBP11YKR098C GAL1P04385 528 aa2.78□□□□□ -1.96
UBP11YKR098C ADP1P25371 1049 aa2.78□□□□□ -1.96
UBP11YKR098C HEM12P32347 362 aaPredicted RBP2.78□□□□□ -1.96
UBP11YKR098C TRZ1P36159 838 aaPredicted RBP2.78□□□□□ -1.96
UBP11YKR098C FLR1P38124 548 aa2.78□□□□□ -1.96
UBP11YKR098C ZRG8P40021 1076 aa2.78□□□□□ -1.96
UBP11YKR098C YIL108WP40483 696 aaKnown RBP2.78□□□□□ -1.96
UBP11YKR098C YFL052WP43551 465 aa2.78□□□□□ -1.96
UBP11YKR098C DUS1P53759 423 aaKnown RBP2.78□□□□□ -1.96
UBP11YKR098C YPL034WQ03083 165 aa2.78□□□□□ -1.96
UBP11YKR098C HFI1Q12060 488 aa2.78□□□□□ -1.96
UBP11YKR098C LPX1Q12405 387 aaKnown RBP2.78□□□□□ -1.96
UBP11YKR098C NSI1Q12457 570 aa2.78□□□□□ -1.96
UBP11YKR098C RPS21BQ3E754 87 aaKnown RBP2.78□□□□□ -1.96
UBP11YKR098C APM4Q99186 491 aa2.78□□□□□ -1.96
UBP11YKR098C SER1P33330 395 aaKnown RBP2.78□□□□□ -1.96
UBP11YKR098C NIC96P34077 839 aa2.78□□□□□ -1.96
UBP11YKR098C RRP8P38961 392 aaKnown RBP2.78□□□□□ -1.96
UBP11YKR098C IES5P40060 125 aa2.78□□□□□ -1.96
UBP11YKR098C RSC8P43609 557 aaKnown RBP2.78□□□□□ -1.96
UBP11YKR098C PUS2P53167 370 aa2.78□□□□□ -1.96
UBP11YKR098C YGR130CP53278 816 aa2.78□□□□□ -1.96
UBP11YKR098C CEF1Q03654 590 aaPredicted RBP2.78□□□□□ -1.96
UBP11YKR098C SKY1Q03656 742 aa2.78□□□□□ -1.96
UBP11YKR098C ATG16Q03818 150 aa2.78□□□□□ -1.96
UBP11YKR098C PHM6Q05637 104 aa2.78□□□□□ -1.96
UBP11YKR098C VTS1Q08831 523 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
UBP11YKR098C COX11P19516 300 aaKnown RBP2.77□□□□□ -1.97
UBP11YKR098C TRX2P22803 104 aaKnown RBP2.77□□□□□ -1.97
UBP11YKR098C OAF3P36023 863 aa2.77□□□□□ -1.97
UBP11YKR098C KAE1P36132 386 aa2.77□□□□□ -1.97
UBP11YKR098C POA1P38218 177 aa2.77□□□□□ -1.97
UBP11YKR098C SSZ1P38788 538 aaKnown RBP2.77□□□□□ -1.97
UBP11YKR098C PCL10P53124 433 aa2.77□□□□□ -1.97
UBP11YKR098C SLD3P53135 668 aa2.77□□□□□ -1.97
UBP11YKR098C SPC105P53148 917 aa2.77□□□□□ -1.97
UBP11YKR098C UBX4P54730 416 aa2.77□□□□□ -1.97
UBP11YKR098C ORC3P54790 616 aa2.77□□□□□ -1.97
UBP11YKR098C ARP4P80428 489 aa2.77□□□□□ -1.97
UBP11YKR098C YHM2Q04013 314 aa2.77□□□□□ -1.97
UBP11YKR098C PTP2P29461 750 aa2.77□□□□□ -1.97
UBP11YKR098C MAL31P38156 614 aa2.77□□□□□ -1.97
UBP11YKR098C FAT1P38225 669 aa2.77□□□□□ -1.97
UBP11YKR098C EMP65P40085 556 aa2.77□□□□□ -1.97
UBP11YKR098C MND2P40577 368 aa2.77□□□□□ -1.97
UBP11YKR098C PSP2P50109 593 aaKnown RBP2.77□□□□□ -1.97
UBP11YKR098C YGR021WP53212 290 aa2.77□□□□□ -1.97
UBP11YKR098C PTA1Q01329 785 aaPredicted RBP2.77□□□□□ -1.97
UBP11YKR098C ECM16Q04217 1267 aaKnown RBP2.77□□□□□ -1.97
UBP11YKR098C VMS1Q04311 632 aaKnown RBP2.77□□□□□ -1.97
UBP11YKR098C YPL277CQ08989 487 aa2.77□□□□□ -1.97
UBP11YKR098C YPR027CQ12079 277 aa2.77□□□□□ -1.97
UBP11YKR098C CYC1P00044 109 aaPredicted RBP2.76□□□□□ -1.97
UBP11YKR098C CYC7P00045 113 aa2.76□□□□□ -1.97
UBP11YKR098C SPE1P08432 466 aa2.76□□□□□ -1.97
UBP11YKR098C PGI1P12709 554 aaKnown RBP2.76□□□□□ -1.97
UBP11YKR098C CMP2P14747 604 aa2.76□□□□□ -1.97
UBP11YKR098C SEC65P29478 273 aa2.76□□□□□ -1.97
UBP11YKR098C ATG19P35193 415 aa2.76□□□□□ -1.97
UBP11YKR098C CTF8P38877 133 aa2.76□□□□□ -1.97
UBP11YKR098C YJR039WP47107 1121 aa2.76□□□□□ -1.97
UBP11YKR098C BRE5P53741 515 aaKnown RBP2.76□□□□□ -1.97
UBP11YKR098C VPS72Q03388 795 aa2.76□□□□□ -1.97
UBP11YKR098C ECM38Q05902 660 aaPredicted RBP2.76□□□□□ -1.97
UBP11YKR098C MLC2Q06580 163 aa2.76□□□□□ -1.97
UBP11YKR098C PEX15Q08215 383 aa2.76□□□□□ -1.97
UBP11YKR098C RRP6Q12149 733 aaKnown RBP2.76□□□□□ -1.97
UBP11YKR098C GPR1Q12361 961 aa2.76□□□□□ -1.97
UBP11YKR098C GAL10P04397 699 aa2.76□□□□□ -1.97
UBP11YKR098C KCC4P25389 1037 aa2.76□□□□□ -1.97
UBP11YKR098C YKL133CP36066 463 aa2.76□□□□□ -1.97
UBP11YKR098C MIP6P38760 659 aaKnown RBP2.76□□□□□ -1.97
UBP11YKR098C SDP1P40479 209 aa2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 283.8 ms