RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	LST4	P34239	828 aa		5.69	□□□□□ -1.5
EBP2	YKL172W	HXT16	P47185	567 aa		5.69	□□□□□ -1.5
EBP2	YKL172W	MNN10	P50108	393 aa	Known RBP	5.69	□□□□□ -1.5
EBP2	YKL172W	YGL081W	P53156	320 aa		5.69	□□□□□ -1.5
EBP2	YKL172W	CLU1	Q03690	1277 aa	Known RBP	5.69	□□□□□ -1.5
EBP2	YKL172W	THI21	Q08975	551 aa		5.69	□□□□□ -1.5
EBP2	YKL172W	HOG1	P32485	435 aa		5.68	□□□□□ -1.5
EBP2	YKL172W	YNL193W	P53870	558 aa		5.68	□□□□□ -1.5
EBP2	YKL172W	TMA10	Q06177	86 aa		5.68	□□□□□ -1.5
EBP2	YKL172W	SWM1	Q12379	170 aa		5.68	□□□□□ -1.5
EBP2	YKL172W	RPL8A	P17076	256 aa	Known RBP	5.67	□□□□□ -1.5
EBP2	YKL172W	NGG1	P32494	702 aa		5.67	□□□□□ -1.5
EBP2	YKL172W	ENB1	Q08299	606 aa		5.67	□□□□□ -1.5
EBP2	YKL172W	RAD18	P10862	487 aa		5.66	□□□□□ -1.5
EBP2	YKL172W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
EBP2	YKL172W	PZF1	P39933	429 aa		5.66	□□□□□ -1.5
EBP2	YKL172W	YJR142W	P47173	342 aa		5.66	□□□□□ -1.5
EBP2	YKL172W	ZIP2	P53061	704 aa		5.66	□□□□□ -1.5
EBP2	YKL172W	MCM6	P53091	1017 aa	Known RBP	5.66	□□□□□ -1.5
EBP2	YKL172W	NHX1	Q04121	633 aa		5.66	□□□□□ -1.5
EBP2	YKL172W	URN1	Q06525	465 aa	Known RBP	5.66	□□□□□ -1.5
EBP2	YKL172W	PCL2	P25693	308 aa		5.65	□□□□□ -1.5
EBP2	YKL172W	HSL7	P38274	827 aa		5.65	□□□□□ -1.5
EBP2	YKL172W	DOT6	P40059	670 aa	Known RBP	5.65	□□□□□ -1.5
EBP2	YKL172W	YFL052W	P43551	465 aa		5.65	□□□□□ -1.5
EBP2	YKL172W	SSY5	P47002	699 aa		5.65	□□□□□ -1.5
EBP2	YKL172W	EXG2	P52911	562 aa		5.65	□□□□□ -1.5
EBP2	YKL172W	CRR1	Q05790	422 aa		5.65	□□□□□ -1.5
EBP2	YKL172W	YLR001C	Q07895	862 aa		5.65	□□□□□ -1.5
EBP2	YKL172W	ADR1	P07248	1323 aa		5.65	□□□□□ -1.51
EBP2	YKL172W	SEC21	P32074	935 aa	Known RBP	5.64	□□□□□ -1.51
EBP2	YKL172W	FLR1	P38124	548 aa		5.64	□□□□□ -1.51
EBP2	YKL172W	NPY1	P53164	384 aa		5.64	□□□□□ -1.51
EBP2	YKL172W	SDA1	P53313	767 aa	Known RBP	5.64	□□□□□ -1.51
EBP2	YKL172W	DNM1	P54861	757 aa		5.64	□□□□□ -1.51
EBP2	YKL172W	PKH1	Q03407	766 aa		5.64	□□□□□ -1.51
EBP2	YKL172W	PEX19	Q07418	342 aa		5.64	□□□□□ -1.51
EBP2	YKL172W	SFL1	P20134	766 aa		5.63	□□□□□ -1.51
EBP2	YKL172W	KAR4	P25583	335 aa		5.63	□□□□□ -1.51
EBP2	YKL172W	DCG1	P32460	244 aa		5.63	□□□□□ -1.51
EBP2	YKL172W	BNA2	P47125	453 aa		5.63	□□□□□ -1.51
EBP2	YKL172W	HLJ1	P48353	224 aa		5.63	□□□□□ -1.51
EBP2	YKL172W	ASI2	P53895	289 aa		5.63	□□□□□ -1.51
EBP2	YKL172W	YDR338C	Q05497	695 aa		5.63	□□□□□ -1.51
EBP2	YKL172W	ESC8	Q08119	714 aa		5.63	□□□□□ -1.51
EBP2	YKL172W	TRM11	Q12463	433 aa		5.63	□□□□□ -1.51
EBP2	YKL172W	CAD1	P24813	409 aa	Known RBP	5.62	□□□□□ -1.51
EBP2	YKL172W	CTS1	P29029	562 aa		5.62	□□□□□ -1.51
EBP2	YKL172W	SAK1	P38990	1142 aa		5.62	□□□□□ -1.51
EBP2	YKL172W	MGS1	P40151	587 aa		5.62	□□□□□ -1.51
EBP2	YKL172W	VHR1	P40522	640 aa		5.62	□□□□□ -1.51
EBP2	YKL172W	PMT3	P47190	753 aa		5.62	□□□□□ -1.51
EBP2	YKL172W	MTR3	P48240	250 aa	Predicted RBP	5.62	□□□□□ -1.51
EBP2	YKL172W	TUB3	P09734	445 aa	Known RBP	5.61	□□□□□ -1.51
EBP2	YKL172W	PFK1	P16861	987 aa	Known RBP	5.61	□□□□□ -1.51
EBP2	YKL172W	PCM1	P38628	557 aa	Known RBP	5.61	□□□□□ -1.51
EBP2	YKL172W	CRP1	P38845	465 aa	Known RBP	5.61	□□□□□ -1.51
EBP2	YKL172W	MUS81	Q04149	632 aa	Predicted RBP	5.61	□□□□□ -1.51
EBP2	YKL172W	ATG33	Q06485	197 aa		5.61	□□□□□ -1.51
EBP2	YKL172W	HCM1	P25364	564 aa		5.6	□□□□□ -1.51
EBP2	YKL172W	PFA3	P42836	336 aa		5.6	□□□□□ -1.51
EBP2	YKL172W	YBP2	P53169	641 aa		5.6	□□□□□ -1.51
EBP2	YKL172W	RPN7	Q06103	429 aa	Known RBP	5.6	□□□□□ -1.51
EBP2	YKL172W	GUD1	Q07729	489 aa		5.6	□□□□□ -1.51
EBP2	YKL172W	GIN4	Q12263	1142 aa		5.6	□□□□□ -1.51
EBP2	YKL172W	PMA1	P05030	918 aa	Known RBP	5.59	□□□□□ -1.51
EBP2	YKL172W	CTF13	P35203	478 aa		5.59	□□□□□ -1.51
EBP2	YKL172W	SHM2	P37291	469 aa	Known RBP	5.59	□□□□□ -1.51
EBP2	YKL172W	SIC1	P38634	284 aa		5.59	□□□□□ -1.51
EBP2	YKL172W	MSS4	P38994	779 aa		5.59	□□□□□ -1.51
EBP2	YKL172W	YNR029C	P53729	429 aa	Known RBP	5.59	□□□□□ -1.51
EBP2	YKL172W	NUP145	P49687	1317 aa		5.58	□□□□□ -1.52
EBP2	YKL172W	YLR415C	O13578	112 aa		5.58	□□□□□ -1.52
EBP2	YKL172W	HMG1	P12683	1054 aa		5.58	□□□□□ -1.52
EBP2	YKL172W	YKR018C	P36114	725 aa		5.58	□□□□□ -1.52
EBP2	YKL172W	RPP1	P38786	293 aa		5.58	□□□□□ -1.52
EBP2	YKL172W	MET13	P53128	600 aa		5.58	□□□□□ -1.52
EBP2	YKL172W	ORC4	P54791	529 aa		5.58	□□□□□ -1.52
EBP2	YKL172W	SLU7	Q02775	382 aa	Known RBP	5.58	□□□□□ -1.52
EBP2	YKL172W	THI73	Q07904	523 aa		5.58	□□□□□ -1.52
EBP2	YKL172W	YLR149C	Q99296	730 aa		5.58	□□□□□ -1.52
EBP2	YKL172W	TRP4	P07285	380 aa	Predicted RBP	5.57	□□□□□ -1.52
EBP2	YKL172W	MIH1	P23748	554 aa		5.57	□□□□□ -1.52
EBP2	YKL172W	YKL222C	P35995	705 aa		5.57	□□□□□ -1.52
EBP2	YKL172W	YKR051W	P36142	418 aa		5.57	□□□□□ -1.52
EBP2	YKL172W	YBR259W	P38338	688 aa		5.57	□□□□□ -1.52
EBP2	YKL172W	GIP4	P39732	760 aa		5.57	□□□□□ -1.52
EBP2	YKL172W	AIM14	P53109	570 aa		5.57	□□□□□ -1.52
EBP2	YKL172W	PCL10	P53124	433 aa		5.57	□□□□□ -1.52
EBP2	YKL172W	NTO1	Q12311	748 aa		5.57	□□□□□ -1.52
EBP2	YKL172W	YCR015C	P25616	317 aa		5.56	□□□□□ -1.52
EBP2	YKL172W	PMI40	P29952	429 aa	Known RBP	5.56	□□□□□ -1.52
EBP2	YKL172W	MIP6	P38760	659 aa	Known RBP	5.56	□□□□□ -1.52
EBP2	YKL172W	ECM1	P39715	212 aa		5.56	□□□□□ -1.52
EBP2	YKL172W	UME1	Q03010	460 aa		5.56	□□□□□ -1.52
EBP2	YKL172W	NRG1	Q03125	231 aa		5.56	□□□□□ -1.52
EBP2	YKL172W	AIM39	Q08223	395 aa		5.56	□□□□□ -1.52
EBP2	YKL172W	GPR1	Q12361	961 aa		5.56	□□□□□ -1.52
EBP2	YKL172W	MET3	P08536	511 aa		5.55	□□□□□ -1.52
EBP2	YKL172W	PRP4	P20053	465 aa	Known RBP	5.55	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 72.9 ms