RNA–Protein interactions for RNA: YKL099C

UTP11, Transcript of Subunit of U3-containing Small Subunit (SSU) processome complex, yeast

Gene UTP11, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UTP11	YKL099C	ALT2	P52892	507 aa		4.6	□□□□□ -1.67
UTP11	YKL099C	ART5	P53244	586 aa	Known RBP	4.6	□□□□□ -1.67
UTP11	YKL099C	PNG1	Q02890	363 aa		4.6	□□□□□ -1.67
UTP11	YKL099C	YLR257W	Q06146	321 aa	Known RBP	4.6	□□□□□ -1.67
UTP11	YKL099C	FPR4	Q06205	392 aa	Predicted RBP	4.6	□□□□□ -1.67
UTP11	YKL099C	PIG1	Q06216	648 aa		4.6	□□□□□ -1.67
UTP11	YKL099C	MMR1	Q06324	491 aa		4.6	□□□□□ -1.67
UTP11	YKL099C	TY1A-NL1	Q12391	440 aa	Known RBP	4.6	□□□□□ -1.67
UTP11	YKL099C	VAS1	P07806	1104 aa	Known RBP	4.59	□□□□□ -1.67
UTP11	YKL099C	FUS1	P11710	512 aa		4.59	□□□□□ -1.67
UTP11	YKL099C	TPM1	P17536	199 aa	Known RBP	4.59	□□□□□ -1.67
UTP11	YKL099C	PPZ1	P26570	692 aa		4.59	□□□□□ -1.67
UTP11	YKL099C	TVP38	P36164	337 aa		4.59	□□□□□ -1.67
UTP11	YKL099C	ACF4	P47129	309 aa		4.59	□□□□□ -1.67
UTP11	YKL099C	MDR1	P53258	950 aa		4.59	□□□□□ -1.67
UTP11	YKL099C	YNL034W	P53963	612 aa		4.59	□□□□□ -1.67
UTP11	YKL099C	HDA1	P53973	706 aa		4.59	□□□□□ -1.67
UTP11	YKL099C	YNL018C	P53976	612 aa		4.59	□□□□□ -1.67
UTP11	YKL099C	SEN1	Q00416	2231 aa	Known RBP	4.59	□□□□□ -1.67
UTP11	YKL099C	SMD2	Q06217	110 aa	Known RBP	4.59	□□□□□ -1.67
UTP11	YKL099C	POL3	P15436	1097 aa		4.58	□□□□□ -1.68
UTP11	YKL099C	IMG2	P25642	146 aa	Predicted RBP	4.58	□□□□□ -1.68
UTP11	YKL099C	ADK2	P26364	225 aa		4.58	□□□□□ -1.68
UTP11	YKL099C	SUL1	P38359	859 aa		4.58	□□□□□ -1.68
UTP11	YKL099C	PAN5	P38787	379 aa		4.58	□□□□□ -1.68
UTP11	YKL099C	CRG1	P38892	291 aa	RIP-Chip data	4.58	□□□□□ -1.68	not detected
UTP11	YKL099C	RAD55	P38953	406 aa		4.58	□□□□□ -1.68
UTP11	YKL099C	YEL025C	P39991	1188 aa		4.58	□□□□□ -1.68
UTP11	YKL099C	PSY2	P40164	858 aa		4.58	□□□□□ -1.68
UTP11	YKL099C	OPT1	P40897	799 aa		4.58	□□□□□ -1.68
UTP11	YKL099C	HUL4	P40985	892 aa		4.58	□□□□□ -1.68
UTP11	YKL099C	GCV2	P49095	1034 aa		4.58	□□□□□ -1.68
UTP11	YKL099C	ZPR1	P53303	486 aa	Known RBP	4.58	□□□□□ -1.68
UTP11	YKL099C	EST2	Q06163	884 aa		4.58	□□□□□ -1.68
UTP11	YKL099C	TFC6	Q06339	672 aa		4.58	□□□□□ -1.68
UTP11	YKL099C	CRD1	Q07560	283 aa		4.58	□□□□□ -1.68
UTP11	YKL099C	RIM20	Q12033	661 aa		4.58	□□□□□ -1.68
UTP11	YKL099C	LAA1	P39526	2014 aa		4.58	□□□□□ -1.68
UTP11	YKL099C	YLR422W	Q06409	1932 aa		4.58	□□□□□ -1.68
UTP11	YKL099C	FUR4	P05316	633 aa	Known RBP	4.57	□□□□□ -1.68
UTP11	YKL099C	SRP54	P20424	541 aa	Known RBP	4.57	□□□□□ -1.68
UTP11	YKL099C	UBC1	P21734	215 aa	Known RBP	4.57	□□□□□ -1.68
UTP11	YKL099C	KIN82	P25341	720 aa		4.57	□□□□□ -1.68
UTP11	YKL099C	UGA4	P32837	571 aa		4.57	□□□□□ -1.68
UTP11	YKL099C	SAS3	P34218	831 aa		4.57	□□□□□ -1.68
UTP11	YKL099C	IRS4	P36115	615 aa	Known RBP	4.57	□□□□□ -1.68
UTP11	YKL099C	CIC1	P38779	376 aa	Known RBP	4.57	□□□□□ -1.68
UTP11	YKL099C	SAD1	P43589	448 aa		4.57	□□□□□ -1.68
UTP11	YKL099C	ASE1	P50275	885 aa		4.57	□□□□□ -1.68
UTP11	YKL099C	GUP1	P53154	560 aa		4.57	□□□□□ -1.68
UTP11	YKL099C	MYO5	Q04439	1219 aa	Known RBP	4.57	□□□□□ -1.68
UTP11	YKL099C	NKP2	Q06162	153 aa		4.57	□□□□□ -1.68
UTP11	YKL099C	YLR455W	Q06188	304 aa		4.57	□□□□□ -1.68
UTP11	YKL099C	PGA3	Q12746	312 aa	Known RBP	4.57	□□□□□ -1.68
UTP11	YKL099C	YOR111W	Q99210	232 aa		4.57	□□□□□ -1.68
UTP11	YKL099C	ACC1	Q00955	2233 aa	Known RBP	4.57	□□□□□ -1.68
UTP11	YKL099C	CAN1	P04817	590 aa		4.56	□□□□□ -1.68
UTP11	YKL099C	SNF1	P06782	633 aa	Known RBP	4.56	□□□□□ -1.68
UTP11	YKL099C	BET2	P20133	325 aa		4.56	□□□□□ -1.68
UTP11	YKL099C	PUP3	P25451	205 aa	Known RBP	4.56	□□□□□ -1.68
UTP11	YKL099C	PYC2	P32327	1180 aa	Known RBP	4.56	□□□□□ -1.68
UTP11	YKL099C	SMC1	P32908	1225 aa		4.56	□□□□□ -1.68
UTP11	YKL099C	BUD2	P33314	1104 aa		4.56	□□□□□ -1.68
UTP11	YKL099C	OMA1	P36163	345 aa		4.56	□□□□□ -1.68
UTP11	YKL099C	BUD16	P39988	312 aa		4.56	□□□□□ -1.68
UTP11	YKL099C	ESL1	P40456	1118 aa		4.56	□□□□□ -1.68
UTP11	YKL099C	KRI1	P42846	591 aa	Known RBP	4.56	□□□□□ -1.68
UTP11	YKL099C	BNI5	P53890	448 aa	Known RBP	4.56	□□□□□ -1.68
UTP11	YKL099C	YNL134C	P53912	376 aa	Known RBP	4.56	□□□□□ -1.68
UTP11	YKL099C	CTR9	P89105	1077 aa		4.56	□□□□□ -1.68
UTP11	YKL099C	HCR1	Q05775	265 aa	Known RBP	4.56	□□□□□ -1.68
UTP11	YKL099C	IRC10	Q08118	586 aa		4.56	□□□□□ -1.68
UTP11	YKL099C	DSE3	Q08729	430 aa		4.56	□□□□□ -1.68
UTP11	YKL099C	MNL2	Q12205	849 aa		4.56	□□□□□ -1.68
UTP11	YKL099C	GLO4	Q12320	285 aa		4.56	□□□□□ -1.68
UTP11	YKL099C	ARP6	Q12509	438 aa		4.56	□□□□□ -1.68
UTP11	YKL099C	WHI2	P12611	486 aa		4.55	□□□□□ -1.68
UTP11	YKL099C	MBR1	P23493	339 aa		4.55	□□□□□ -1.68
UTP11	YKL099C	SEC21	P32074	935 aa	Known RBP	4.55	□□□□□ -1.68
UTP11	YKL099C	CSE2	P33308	149 aa		4.55	□□□□□ -1.68
UTP11	YKL099C	PCM1	P38628	557 aa	Known RBP	4.55	□□□□□ -1.68
UTP11	YKL099C	EAF5	P39995	279 aa		4.55	□□□□□ -1.68
UTP11	YKL099C	MMF1	P40185	145 aa	Known RBP	4.55	□□□□□ -1.68
UTP11	YKL099C	MOB1	P40484	314 aa		4.55	□□□□□ -1.68
UTP11	YKL099C	YIR016W	P40572	265 aa		4.55	□□□□□ -1.68
UTP11	YKL099C	LEM3	P42838	414 aa		4.55	□□□□□ -1.68
UTP11	YKL099C	DSE4	P53753	1117 aa		4.55	□□□□□ -1.68
UTP11	YKL099C	CNM67	P53865	581 aa	Known RBP	4.55	□□□□□ -1.68
UTP11	YKL099C	MUK1	Q02866	612 aa		4.55	□□□□□ -1.68
UTP11	YKL099C	OYE2	Q03558	400 aa	Known RBP	4.55	□□□□□ -1.68
UTP11	YKL099C	YDR341C	Q05506	607 aa	Known RBP	4.55	□□□□□ -1.68
UTP11	YKL099C	REC8	Q12188	680 aa		4.55	□□□□□ -1.68
UTP11	YKL099C	YLR122C	Q12312	125 aa		4.55	□□□□□ -1.68
UTP11	YKL099C	HIF1	Q12373	385 aa		4.55	□□□□□ -1.68
UTP11	YKL099C	PGK1	P00560	416 aa	Known RBP	4.54	□□□□□ -1.68
UTP11	YKL099C	ILV1	P00927	576 aa	Known RBP	4.54	□□□□□ -1.68
UTP11	YKL099C	CDC16	P09798	840 aa		4.54	□□□□□ -1.68
UTP11	YKL099C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
UTP11	YKL099C	RNR3	P21672	869 aa	Known RBP	4.54	□□□□□ -1.68
UTP11	YKL099C	PEX1	P24004	1043 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms