RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C ECM9Q02202 377 aa6.64□□□□□ -1.35
YIR043CYIR043C SSL1Q04673 461 aaPredicted RBP6.64□□□□□ -1.35
YIR043CYIR043C CDA1Q06702 301 aa6.64□□□□□ -1.35
YIR043CYIR043C PHM7Q12252 991 aa6.64□□□□□ -1.35
YIR043CYIR043C Q0142Q9ZZW4 58 aa6.64□□□□□ -1.35
YIR043CYIR043C ATP4P05626 244 aa6.63□□□□□ -1.35
YIR043CYIR043C CMP2P14747 604 aa6.63□□□□□ -1.35
YIR043CYIR043C SKN7P38889 622 aa6.63□□□□□ -1.35
YIR043CYIR043C CCT5P40413 562 aaKnown RBP6.63□□□□□ -1.35
YIR043CYIR043C SUB1P54000 292 aaKnown RBP6.63□□□□□ -1.35
YIR043CYIR043C SIZ1Q04195 904 aa6.63□□□□□ -1.35
YIR043CYIR043C RPN7Q06103 429 aaKnown RBP6.63□□□□□ -1.35
YIR043CYIR043C KAR1P11927 433 aa6.62□□□□□ -1.35
YIR043CYIR043C SST2P11972 698 aaKnown RBP6.62□□□□□ -1.35
YIR043CYIR043C PSP2P50109 593 aaKnown RBP6.62□□□□□ -1.35
YIR043CYIR043C YLR149CQ99296 730 aa6.62□□□□□ -1.35
YIR043CYIR043C CYC7P00045 113 aa6.61□□□□□ -1.35
YIR043CYIR043C POA1P38218 177 aa6.61□□□□□ -1.35
YIR043CYIR043C BNA2P47125 453 aa6.61□□□□□ -1.35
YIR043CYIR043C ZIP2P53061 704 aa6.61□□□□□ -1.35
YIR043CYIR043C DUS1P53759 423 aaKnown RBP6.61□□□□□ -1.35
YIR043CYIR043C YHM2Q04013 314 aa6.61□□□□□ -1.35
YIR043CYIR043C THI21Q08975 551 aa6.61□□□□□ -1.35
YIR043CYIR043C YPL277CQ08989 487 aa6.61□□□□□ -1.35
YIR043CYIR043C FLR1P38124 548 aa6.6□□□□□ -1.35
YIR043CYIR043C BIT2P38346 545 aa6.6□□□□□ -1.35
YIR043CYIR043C ENV11P53246 860 aa6.6□□□□□ -1.35
YIR043CYIR043C PTA1Q01329 785 aaPredicted RBP6.6□□□□□ -1.35
YIR043CYIR043C YPL062WQ02781 134 aa6.6□□□□□ -1.35
YIR043CYIR043C LPX1Q12405 387 aaKnown RBP6.6□□□□□ -1.35
YIR043CYIR043C MNN4P36044 1178 aa6.59□□□□□ -1.35
YIR043CYIR043C HXT6P39003 570 aaKnown RBP6.59□□□□□ -1.35
YIR043CYIR043C HXT7P39004 570 aa6.59□□□□□ -1.35
YIR043CYIR043C BFA1P47113 574 aa6.59□□□□□ -1.35
YIR043CYIR043C SPC105P53148 917 aa6.59□□□□□ -1.35
YIR043CYIR043C RPS21BQ3E754 87 aaKnown RBP6.59□□□□□ -1.35
YIR043CYIR043C CYC1P00044 109 aaPredicted RBP6.58□□□□□ -1.36
YIR043CYIR043C GAL10P04397 699 aa6.58□□□□□ -1.36
YIR043CYIR043C RPS21AP0C0V8 87 aaKnown RBP6.58□□□□□ -1.36
YIR043CYIR043C PWP2P25635 923 aaKnown RBP6.58□□□□□ -1.36
YIR043CYIR043C HSP78P33416 811 aa6.58□□□□□ -1.36
YIR043CYIR043C VPS24P36095 224 aaKnown RBP6.58□□□□□ -1.36
YIR043CYIR043C ICP55P40051 511 aa6.58□□□□□ -1.36
YIR043CYIR043C MET14Q02196 202 aa6.58□□□□□ -1.36
YIR043CYIR043C VMS1Q04311 632 aaKnown RBP6.58□□□□□ -1.36
YIR043CYIR043C PHM6Q05637 104 aa6.58□□□□□ -1.36
YIR043CYIR043C YPR027CQ12079 277 aa6.58□□□□□ -1.36
YIR043CYIR043C SPE1P08432 466 aa6.57□□□□□ -1.36
YIR043CYIR043C HEM12P32347 362 aaPredicted RBP6.57□□□□□ -1.36
YIR043CYIR043C SWE1P32944 819 aa6.57□□□□□ -1.36
YIR043CYIR043C NIC96P34077 839 aa6.57□□□□□ -1.36
YIR043CYIR043C YKR018CP36114 725 aa6.57□□□□□ -1.36
YIR043CYIR043C FUI1P38196 639 aa6.57□□□□□ -1.36
YIR043CYIR043C MND2P40577 368 aa6.57□□□□□ -1.36
YIR043CYIR043C PIP2P52960 996 aa6.57□□□□□ -1.36
YIR043CYIR043C PBP1P53297 722 aaKnown RBP6.57□□□□□ -1.36
YIR043CYIR043C SKY1Q03656 742 aa6.57□□□□□ -1.36
YIR043CYIR043C BUD21Q08492 214 aaPredicted RBP6.57□□□□□ -1.36
YIR043CYIR043C COX11P19516 300 aaKnown RBP6.56□□□□□ -1.36
YIR043CYIR043C SEC65P29478 273 aa6.56□□□□□ -1.36
YIR043CYIR043C MAL31P38156 614 aa6.56□□□□□ -1.36
YIR043CYIR043C SSY5P47002 699 aa6.56□□□□□ -1.36
YIR043CYIR043C PCL10P53124 433 aa6.56□□□□□ -1.36
YIR043CYIR043C SLD3P53135 668 aa6.56□□□□□ -1.36
YIR043CYIR043C ECM16Q04217 1267 aaKnown RBP6.56□□□□□ -1.36
YIR043CYIR043C HFI1Q12060 488 aa6.56□□□□□ -1.36
YIR043CYIR043C TRP3P00937 484 aa6.55□□□□□ -1.36
YIR043CYIR043C GAL1P04385 528 aa6.55□□□□□ -1.36
YIR043CYIR043C FBP1P09201 348 aa6.55□□□□□ -1.36
YIR043CYIR043C EMP65P40085 556 aa6.55□□□□□ -1.36
YIR043CYIR043C GTF1P53260 183 aaPredicted RBP6.55□□□□□ -1.36
YIR043CYIR043C ATG16Q03818 150 aa6.55□□□□□ -1.36
YIR043CYIR043C WHI4Q07655 649 aaKnown RBP6.55□□□□□ -1.36
YIR043CYIR043C DCS2Q12123 353 aa6.55□□□□□ -1.36
YIR043CYIR043C PIF1P07271 859 aa6.54□□□□□ -1.36
YIR043CYIR043C TRX2P22803 104 aaKnown RBP6.54□□□□□ -1.36
YIR043CYIR043C PTP2P29461 750 aa6.54□□□□□ -1.36
YIR043CYIR043C SER1P33330 395 aaKnown RBP6.54□□□□□ -1.36
YIR043CYIR043C OAF3P36023 863 aa6.54□□□□□ -1.36
YIR043CYIR043C YKR075CP36155 307 aa6.54□□□□□ -1.36
YIR043CYIR043C ETP1P38748 585 aaKnown RBP6.54□□□□□ -1.36
YIR043CYIR043C YHR078WP38799 552 aa6.54□□□□□ -1.36
YIR043CYIR043C MTR3P48240 250 aaPredicted RBP6.54□□□□□ -1.36
YIR043CYIR043C YOR352WQ08816 343 aa6.54□□□□□ -1.36
YIR043CYIR043C HCA4P20448 770 aaKnown RBP6.53□□□□□ -1.36
YIR043CYIR043C KCC4P25389 1037 aa6.53□□□□□ -1.36
YIR043CYIR043C YKU70P32807 602 aa6.53□□□□□ -1.36
YIR043CYIR043C ATG19P35193 415 aa6.53□□□□□ -1.36
YIR043CYIR043C YKL133CP36066 463 aa6.53□□□□□ -1.36
YIR043CYIR043C TRZ1P36159 838 aaPredicted RBP6.53□□□□□ -1.36
YIR043CYIR043C FAT1P38225 669 aa6.53□□□□□ -1.36
YIR043CYIR043C CTF8P38877 133 aa6.53□□□□□ -1.36
YIR043CYIR043C SAK1P38990 1142 aa6.53□□□□□ -1.36
YIR043CYIR043C SDP1P40479 209 aa6.53□□□□□ -1.36
YIR043CYIR043C UBX4P54730 416 aa6.53□□□□□ -1.36
YIR043CYIR043C ARP4P80428 489 aa6.53□□□□□ -1.36
YIR043CYIR043C GPD1Q00055 391 aaKnown RBP6.53□□□□□ -1.36
YIR043CYIR043C TPO1Q07824 586 aa6.53□□□□□ -1.36
YIR043CYIR043C PUS1Q12211 544 aaKnown RBP6.53□□□□□ -1.36
YIR043CYIR043C APM4Q99186 491 aa6.53□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms