RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W YOR022CQ12204 715 aa3.22□□□□□ -1.89
MSL1YIR009W YLR415CO13578 112 aa3.21□□□□□ -1.9
MSL1YIR009W RAD4P14736 754 aa3.21□□□□□ -1.9
MSL1YIR009W HSP60P19882 572 aaKnown RBP3.21□□□□□ -1.9
MSL1YIR009W YCL002CP25565 263 aa3.21□□□□□ -1.9
MSL1YIR009W EMC3P36039 253 aa3.21□□□□□ -1.9
MSL1YIR009W CUE2P36075 443 aaKnown RBP3.21□□□□□ -1.9
MSL1YIR009W GGA2P38817 585 aaKnown RBP3.21□□□□□ -1.9
MSL1YIR009W SAK1P38990 1142 aa3.21□□□□□ -1.9
MSL1YIR009W PFA3P42836 336 aa3.21□□□□□ -1.9
MSL1YIR009W GYP8P43570 497 aa3.21□□□□□ -1.9
MSL1YIR009W SSY5P47002 699 aa3.21□□□□□ -1.9
MSL1YIR009W TAD1P53065 400 aa3.21□□□□□ -1.9
MSL1YIR009W YGR283CP53336 341 aaPredicted RBP3.21□□□□□ -1.9
MSL1YIR009W LRS4Q04087 347 aaKnown RBP3.21□□□□□ -1.9
MSL1YIR009W THI21Q08975 551 aa3.21□□□□□ -1.9
MSL1YIR009W SUT2Q12286 268 aa3.21□□□□□ -1.9
MSL1YIR009W OSH2Q12451 1283 aa3.21□□□□□ -1.9
MSL1YIR009W CIT1P00890 479 aa3.2□□□□□ -1.9
MSL1YIR009W NGG1P32494 702 aa3.2□□□□□ -1.9
MSL1YIR009W YIR042CP40586 236 aa3.2□□□□□ -1.9
MSL1YIR009W LGE1Q02796 332 aaKnown RBP3.2□□□□□ -1.9
MSL1YIR009W NRG1Q03125 231 aa3.2□□□□□ -1.9
MSL1YIR009W TAF8Q03750 510 aa3.2□□□□□ -1.9
MSL1YIR009W CRR1Q05790 422 aa3.2□□□□□ -1.9
MSL1YIR009W BDF2Q07442 638 aa3.2□□□□□ -1.9
MSL1YIR009W GPR1Q12361 961 aa3.2□□□□□ -1.9
MSL1YIR009W PRC1P00729 532 aa3.19□□□□□ -1.9
MSL1YIR009W SIC1P38634 284 aa3.19□□□□□ -1.9
MSL1YIR009W YHR020WP38708 688 aaKnown RBP3.19□□□□□ -1.9
MSL1YIR009W PCL5P38794 229 aa3.19□□□□□ -1.9
MSL1YIR009W DAM1P53267 343 aa3.19□□□□□ -1.9
MSL1YIR009W RIA1P53893 1110 aa3.19□□□□□ -1.9
MSL1YIR009W IRC13Q08630 104 aa3.19□□□□□ -1.9
MSL1YIR009W TGL5Q12043 749 aa3.19□□□□□ -1.9
MSL1YIR009W LAT1P12695 482 aaKnown RBP3.18□□□□□ -1.9
MSL1YIR009W BET3P36149 193 aa3.18□□□□□ -1.9
MSL1YIR009W HOS4P40480 1083 aa3.18□□□□□ -1.9
MSL1YIR009W TIM54P47045 478 aa3.18□□□□□ -1.9
MSL1YIR009W YGR125WP53273 1036 aa3.18□□□□□ -1.9
MSL1YIR009W RSC3Q06639 885 aa3.18□□□□□ -1.9
MSL1YIR009W YDL124WQ07551 312 aaKnown RBP3.18□□□□□ -1.9
MSL1YIR009W NDJ1Q12366 352 aa3.18□□□□□ -1.9
MSL1YIR009W TOM70P07213 617 aaKnown RBP3.17□□□□□ -1.9
MSL1YIR009W GFA1P14742 717 aaKnown RBP3.17□□□□□ -1.9
MSL1YIR009W SAP190P36123 1033 aa3.17□□□□□ -1.9
MSL1YIR009W TDP1P38319 544 aa3.17□□□□□ -1.9
MSL1YIR009W SET5P38890 526 aaKnown RBP3.17□□□□□ -1.9
MSL1YIR009W HUL4P40985 892 aa3.17□□□□□ -1.9
MSL1YIR009W VPS73P53142 486 aaKnown RBP3.17□□□□□ -1.9
MSL1YIR009W ASM4Q05166 528 aa3.17□□□□□ -1.9
MSL1YIR009W REH1Q06709 432 aa3.17□□□□□ -1.9
MSL1YIR009W SGO1Q08490 590 aa3.17□□□□□ -1.9
MSL1YIR009W YBR182C-AQ8TGU6 64 aa3.17□□□□□ -1.9
MSL1YIR009W BCD1P38772 366 aa3.16□□□□□ -1.9
MSL1YIR009W FMP52P40008 231 aa3.16□□□□□ -1.9
MSL1YIR009W ALG2P43636 503 aa3.16□□□□□ -1.9
MSL1YIR009W TAH11P47112 604 aa3.16□□□□□ -1.9
MSL1YIR009W HXT16P47185 567 aa3.16□□□□□ -1.9
MSL1YIR009W HSV2P50079 448 aaPredicted RBP3.16□□□□□ -1.9
MSL1YIR009W ATP25Q03153 612 aa3.16□□□□□ -1.9
MSL1YIR009W IOC4Q04213 475 aa3.16□□□□□ -1.9
MSL1YIR009W YDR514CQ04408 483 aa3.16□□□□□ -1.9
MSL1YIR009W FLC1Q08967 793 aa3.16□□□□□ -1.9
MSL1YIR009W ATG11Q12527 1178 aa3.16□□□□□ -1.9
MSL1YIR009W BNR1P40450 1375 aa3.15□□□□□ -1.9
MSL1YIR009W HIS7P33734 552 aaKnown RBP3.15□□□□□ -1.91
MSL1YIR009W BAP3P41815 604 aa3.15□□□□□ -1.91
MSL1YIR009W TY4A-JP47023 414 aa3.15□□□□□ -1.91
MSL1YIR009W YJL049WP47048 450 aa3.15□□□□□ -1.91
MSL1YIR009W UBC11P52492 156 aa3.15□□□□□ -1.91
MSL1YIR009W TEL2P53038 688 aa3.15□□□□□ -1.91
MSL1YIR009W RTA1P53047 317 aa3.15□□□□□ -1.91
MSL1YIR009W ZIP2P53061 704 aa3.15□□□□□ -1.91
MSL1YIR009W TEX1P53851 422 aaKnown RBP3.15□□□□□ -1.91
MSL1YIR009W MET7Q08645 548 aa3.15□□□□□ -1.91
MSL1YIR009W YTA7P40340 1379 aa3.14□□□□□ -1.91
MSL1YIR009W CAN1P04817 590 aa3.14□□□□□ -1.91
MSL1YIR009W CDC43P18898 376 aa3.14□□□□□ -1.91
MSL1YIR009W HCA4P20448 770 aaKnown RBP3.14□□□□□ -1.91
MSL1YIR009W KIN3P22209 435 aa3.14□□□□□ -1.91
MSL1YIR009W PEX2P32800 271 aa3.14□□□□□ -1.91
MSL1YIR009W PPZ2P33329 710 aa3.14□□□□□ -1.91
MSL1YIR009W SPC29P33419 253 aa3.14□□□□□ -1.91
MSL1YIR009W YBR259WP38338 688 aa3.14□□□□□ -1.91
MSL1YIR009W RLP7P40693 322 aaKnown RBP3.14□□□□□ -1.91
MSL1YIR009W MTR3P48240 250 aaPredicted RBP3.14□□□□□ -1.91
MSL1YIR009W SMX3P54999 86 aaPredicted RBP3.14□□□□□ -1.91
MSL1YIR009W SSL2Q00578 843 aa3.14□□□□□ -1.91
MSL1YIR009W DIF1O13577 133 aa3.13□□□□□ -1.91
MSL1YIR009W PHR1P05066 565 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
MSL1YIR009W MET6P05694 767 aaKnown RBP3.13□□□□□ -1.91
MSL1YIR009W TUB1P09733 447 aaKnown RBP3.13□□□□□ -1.91
MSL1YIR009W HIR1P32479 840 aa3.13□□□□□ -1.91
MSL1YIR009W FLO10P36170 1169 aa3.13□□□□□ -1.91
MSL1YIR009W CBR1P38626 284 aaKnown RBP3.13□□□□□ -1.91
MSL1YIR009W RIX1P38883 763 aaPredicted RBP3.13□□□□□ -1.91
MSL1YIR009W ECM1P39715 212 aa3.13□□□□□ -1.91
MSL1YIR009W RSP5P39940 809 aaKnown RBP3.13□□□□□ -1.91
MSL1YIR009W SHR5P41912 237 aa3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 186.5 ms