RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C BIT61P47041 543 aa3.82□□□□□ -1.8
SSM4YIL030C HCR1Q05775 265 aaKnown RBP3.82□□□□□ -1.8
SSM4YIL030C VIP1Q06685 1146 aaKnown RBP3.82□□□□□ -1.8
SSM4YIL030C THI3Q07471 609 aa3.82□□□□□ -1.8
SSM4YIL030C PUF3Q07807 879 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
SSM4YIL030C BUG1Q12191 341 aa3.82□□□□□ -1.8
SSM4YIL030C YVC1Q12324 675 aa3.82□□□□□ -1.8
SSM4YIL030C NCP1P16603 691 aaKnown RBP3.81□□□□□ -1.8
SSM4YIL030C TRK2P28584 889 aa3.81□□□□□ -1.8
SSM4YIL030C RIM101P33400 625 aa3.81□□□□□ -1.8
SSM4YIL030C SPC97P38863 823 aa3.81□□□□□ -1.8
SSM4YIL030C ARG2P40360 574 aa3.81□□□□□ -1.8
SSM4YIL030C MMM1P41800 426 aa3.81□□□□□ -1.8
SSM4YIL030C EMW1P42842 904 aaKnown RBP3.81□□□□□ -1.8
SSM4YIL030C YFH7P43591 353 aa3.81□□□□□ -1.8
SSM4YIL030C TAF6P53040 516 aa3.81□□□□□ -1.8
SSM4YIL030C RPL34AP87262 121 aaPredicted RBP3.81□□□□□ -1.8
SSM4YIL030C YPL062WQ02781 134 aa3.81□□□□□ -1.8
SSM4YIL030C MPC54Q08550 464 aa3.81□□□□□ -1.8
SSM4YIL030C RCN2Q12044 265 aa3.81□□□□□ -1.8
SSM4YIL030C DPH6Q12429 685 aa3.81□□□□□ -1.8
SSM4YIL030C PGK1P00560 416 aaKnown RBP3.81□□□□□ -1.8
SSM4YIL030C KIN1P13185 1064 aa3.81□□□□□ -1.8
SSM4YIL030C SLA1P32790 1244 aa3.81□□□□□ -1.8
SSM4YIL030C YBR241CP38142 488 aa3.81□□□□□ -1.8
SSM4YIL030C SAP1P39955 897 aaKnown RBP3.81□□□□□ -1.8
SSM4YIL030C YGR273CP53329 174 aa3.81□□□□□ -1.8
SSM4YIL030C IGO1P53897 168 aa3.81□□□□□ -1.8
SSM4YIL030C IRC4Q03036 179 aa3.81□□□□□ -1.8
SSM4YIL030C BUL2Q03758 920 aaKnown RBP3.81□□□□□ -1.8
SSM4YIL030C PHO87P25360 923 aa3.81□□□□□ -1.8
SSM4YIL030C MLS1P30952 554 aa3.81□□□□□ -1.8
SSM4YIL030C SLA2P33338 968 aa3.81□□□□□ -1.8
SSM4YIL030C OCT1P35999 772 aa3.81□□□□□ -1.8
SSM4YIL030C BOI1P38041 980 aaKnown RBP3.81□□□□□ -1.8
SSM4YIL030C SCS2P40075 244 aaKnown RBP3.81□□□□□ -1.8
SSM4YIL030C ALG5P40350 334 aa3.81□□□□□ -1.8
SSM4YIL030C DIA3P52290 468 aa3.81□□□□□ -1.8
SSM4YIL030C SNU71P53207 620 aaKnown RBP3.81□□□□□ -1.8
SSM4YIL030C RAD30Q04049 632 aa3.81□□□□□ -1.8
SSM4YIL030C YDR341CQ05506 607 aaKnown RBP3.81□□□□□ -1.8
SSM4YIL030C NDL1Q06568 189 aa3.81□□□□□ -1.8
SSM4YIL030C YPL119C-AQ3E751 87 aa3.81□□□□□ -1.8
SSM4YIL030C CBF1P17106 351 aa3.8□□□□□ -1.8
SSM4YIL030C UBP11P36026 717 aa3.8□□□□□ -1.8
SSM4YIL030C GRS1P38088 690 aaKnown RBP3.8□□□□□ -1.8
SSM4YIL030C KAP104P38217 918 aaKnown RBP3.8□□□□□ -1.8
SSM4YIL030C PCF11P39081 626 aaPredicted RBP3.8□□□□□ -1.8
SSM4YIL030C JJJ2P46997 583 aa3.8□□□□□ -1.8
SSM4YIL030C CWC22P53333 577 aaKnown RBP3.8□□□□□ -1.8
SSM4YIL030C PGA2P53903 129 aa3.8□□□□□ -1.8
SSM4YIL030C ARK1P53974 638 aa3.8□□□□□ -1.8
SSM4YIL030C ERO1Q03103 563 aa3.8□□□□□ -1.8
SSM4YIL030C SXM1Q04175 944 aaKnown RBP3.8□□□□□ -1.8
SSM4YIL030C KAP95Q06142 861 aaKnown RBP3.8□□□□□ -1.8
SSM4YIL030C YLH47Q06493 454 aa3.8□□□□□ -1.8
SSM4YIL030C OPY2Q06810 360 aa3.8□□□□□ -1.8
SSM4YIL030C HSP82P02829 709 aaKnown RBP3.8□□□□□ -1.8
SSM4YIL030C SWE1P32944 819 aa3.8□□□□□ -1.8
SSM4YIL030C BLI1P35727 113 aa3.8□□□□□ -1.8
SSM4YIL030C LHS1P36016 881 aa3.8□□□□□ -1.8
SSM4YIL030C CIT3P43635 486 aa3.8□□□□□ -1.8
SSM4YIL030C MSN5P52918 1224 aa3.8□□□□□ -1.8
SSM4YIL030C ASI1P54074 624 aa3.8□□□□□ -1.8
SSM4YIL030C RMD1Q03441 430 aa3.8□□□□□ -1.8
SSM4YIL030C SLK19Q08581 821 aaKnown RBP3.8□□□□□ -1.8
SSM4YIL030C PCL8Q08966 492 aa3.8□□□□□ -1.8
SSM4YIL030C MED1Q12321 566 aa3.8□□□□□ -1.8
SSM4YIL030C YPT6Q99260 215 aa3.8□□□□□ -1.8
SSM4YIL030C TYR1P20049 452 aa3.8□□□□□ -1.8
SSM4YIL030C FRE2P36033 711 aa3.8□□□□□ -1.8
SSM4YIL030C DBP7P36120 742 aaKnown RBP3.8□□□□□ -1.8
SSM4YIL030C RIM2P38127 377 aa3.8□□□□□ -1.8
SSM4YIL030C PEX18P38855 283 aa3.8□□□□□ -1.8
SSM4YIL030C AGP3P43548 558 aa3.8□□□□□ -1.8
SSM4YIL030C YPR003CP53394 754 aa3.8□□□□□ -1.8
SSM4YIL030C MSH6Q03834 1242 aa3.8□□□□□ -1.8
SSM4YIL030C RRP17Q04031 235 aaPredicted RBP3.8□□□□□ -1.8
SSM4YIL030C YPR078CQ06813 372 aa3.8□□□□□ -1.8
SSM4YIL030C RKM4Q12504 494 aa3.8□□□□□ -1.8
SSM4YIL030C RAD1P06777 1100 aa3.79□□□□□ -1.8
SSM4YIL030C TIF1P10081 395 aaKnown RBP3.79□□□□□ -1.8
SSM4YIL030C BUD14P27637 709 aa3.79□□□□□ -1.8
SSM4YIL030C YME2P32843 850 aa3.79□□□□□ -1.8
SSM4YIL030C RPG1P38249 964 aaKnown RBP3.79□□□□□ -1.8
SSM4YIL030C RPL34BP40525 121 aaKnown RBP3.79□□□□□ -1.8
SSM4YIL030C ARO8P53090 500 aaKnown RBP3.79□□□□□ -1.8
SSM4YIL030C YNL247WP53852 767 aaKnown RBP3.79□□□□□ -1.8
SSM4YIL030C YLR278CQ05854 1341 aa3.79□□□□□ -1.8
SSM4YIL030C YLR422WQ06409 1932 aa3.79□□□□□ -1.8
SSM4YIL030C ARG82P07250 355 aa3.79□□□□□ -1.8
SSM4YIL030C SRM1P21827 482 aa3.79□□□□□ -1.8
SSM4YIL030C YSC83P32792 385 aa3.79□□□□□ -1.8
SSM4YIL030C YBL055CP34220 418 aaPredicted RBP3.79□□□□□ -1.8
SSM4YIL030C TMA108P40462 946 aa3.79□□□□□ -1.8
SSM4YIL030C BRE5P53741 515 aaKnown RBP3.79□□□□□ -1.8
SSM4YIL030C LGE1Q02796 332 aaKnown RBP3.79□□□□□ -1.8
SSM4YIL030C INM2Q05533 292 aa3.79□□□□□ -1.8
SSM4YIL030C CDA1Q06702 301 aa3.79□□□□□ -1.8
SSM4YIL030C YPL277CQ08989 487 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms