RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C FOL1P53848 824 aa6.02□□□□□ -1.45
SFB3YHR098C DIG1Q03063 452 aaKnown RBP6.02□□□□□ -1.45
SFB3YHR098C RRP9Q06506 573 aaKnown RBP6.02□□□□□ -1.45
SFB3YHR098C IMH1Q06704 911 aaKnown RBP6.02□□□□□ -1.45
SFB3YHR098C GPR1Q12361 961 aa6.02□□□□□ -1.45
SFB3YHR098C BMH1P29311 267 aaKnown RBP6.01□□□□□ -1.45
SFB3YHR098C NAM7P30771 971 aaKnown RBP6.01□□□□□ -1.45
SFB3YHR098C EFB1P32471 206 aaKnown RBP6.01□□□□□ -1.45
SFB3YHR098C ERP2P39704 215 aa6.01□□□□□ -1.45
SFB3YHR098C COS6P53344 381 aa6.01□□□□□ -1.45
SFB3YHR098C LGE1Q02796 332 aaKnown RBP6.01□□□□□ -1.45
SFB3YHR098C CSC1Q06538 782 aa6.01□□□□□ -1.45
SFB3YHR098C BUD7Q08754 746 aa6.01□□□□□ -1.45
SFB3YHR098C GET3Q12154 354 aaKnown RBP6.01□□□□□ -1.45
SFB3YHR098C PTC5Q12511 572 aa6.01□□□□□ -1.45
SFB3YHR098C DBP1P24784 617 aaKnown RBP6.01□□□□□ -1.45
SFB3YHR098C PWP2P25635 923 aaKnown RBP6.01□□□□□ -1.45
SFB3YHR098C UBC6P33296 250 aaPredicted RBP6.01□□□□□ -1.45
SFB3YHR098C MRP8P35719 219 aa6.01□□□□□ -1.45
SFB3YHR098C DBP7P36120 742 aaKnown RBP6.01□□□□□ -1.45
SFB3YHR098C AKR1P39010 764 aa6.01□□□□□ -1.45
SFB3YHR098C YEN1P40028 759 aa6.01□□□□□ -1.45
SFB3YHR098C YGR273CP53329 174 aa6.01□□□□□ -1.45
SFB3YHR098C SHE9Q04172 456 aa6.01□□□□□ -1.45
SFB3YHR098C ATG26Q06321 1198 aa6.01□□□□□ -1.45
SFB3YHR098C ZRT2Q12436 422 aa6.01□□□□□ -1.45
SFB3YHR098C LAM4P38800 1345 aa6.01□□□□□ -1.45
SFB3YHR098C THR1P17423 357 aaKnown RBP6.01□□□□□ -1.45
SFB3YHR098C SUV3P32580 737 aa6.01□□□□□ -1.45
SFB3YHR098C FES1P38260 290 aa6.01□□□□□ -1.45
SFB3YHR098C BCD1P38772 366 aa6.01□□□□□ -1.45
SFB3YHR098C PEX18P38855 283 aa6.01□□□□□ -1.45
SFB3YHR098C YEL023CP39992 682 aa6.01□□□□□ -1.45
SFB3YHR098C YMR147WP40218 223 aaKnown RBP6.01□□□□□ -1.45
SFB3YHR098C STB2P46679 850 aa6.01□□□□□ -1.45
SFB3YHR098C RPM2Q02773 1202 aa6.01□□□□□ -1.45
SFB3YHR098C ATG13Q06628 738 aa6.01□□□□□ -1.45
SFB3YHR098C FRA1Q07825 749 aa6.01□□□□□ -1.45
SFB3YHR098C YPR089WO13585 888 aa6□□□□□ -1.45
SFB3YHR098C CLN3P13365 580 aa6□□□□□ -1.45
SFB3YHR098C POL3P15436 1097 aa6□□□□□ -1.45
SFB3YHR098C TRX2P22803 104 aaKnown RBP6□□□□□ -1.45
SFB3YHR098C NMD5P46970 1048 aa6□□□□□ -1.45
SFB3YHR098C ECI1Q05871 280 aa6□□□□□ -1.45
SFB3YHR098C YAP7Q08182 245 aa6□□□□□ -1.45
SFB3YHR098C HTZ1Q12692 134 aaKnown RBP6□□□□□ -1.45
SFB3YHR098C FKS3Q04952 1785 aa6□□□□□ -1.45
SFB3YHR098C POM152P39685 1337 aa6□□□□□ -1.45
SFB3YHR098C TUS1Q06412 1307 aa6□□□□□ -1.45
SFB3YHR098C AST1P35183 429 aa6□□□□□ -1.45
SFB3YHR098C UBX7P38349 436 aa6□□□□□ -1.45
SFB3YHR098C STN1P38960 494 aa6□□□□□ -1.45
SFB3YHR098C IRR1P40541 1150 aa6□□□□□ -1.45
SFB3YHR098C EMW1P42842 904 aaKnown RBP6□□□□□ -1.45
SFB3YHR098C CPR6P53691 371 aaKnown RBP6□□□□□ -1.45
SFB3YHR098C NAF1P53919 492 aaKnown RBP6□□□□□ -1.45
SFB3YHR098C GDE1Q02979 1223 aa6□□□□□ -1.45
SFB3YHR098C YDR179W-AQ03983 463 aa6□□□□□ -1.45
SFB3YHR098C YDR341CQ05506 607 aaKnown RBP6□□□□□ -1.45
SFB3YHR098C ALE1Q08548 619 aa6□□□□□ -1.45
SFB3YHR098C VIK1Q12045 647 aa6□□□□□ -1.45
SFB3YHR098C YOR111WQ99210 232 aa6□□□□□ -1.45
SFB3YHR098C SEM1O94742 89 aa5.99□□□□□ -1.45
SFB3YHR098C VMA2P16140 517 aaKnown RBP5.99□□□□□ -1.45
SFB3YHR098C OPI1P21957 404 aa5.99□□□□□ -1.45
SFB3YHR098C SWI4P25302 1093 aaKnown RBP5.99□□□□□ -1.45
SFB3YHR098C TIM23P32897 222 aa5.99□□□□□ -1.45
SFB3YHR098C MUM2P38236 366 aa5.99□□□□□ -1.45
SFB3YHR098C ALG5P40350 334 aa5.99□□□□□ -1.45
SFB3YHR098C TAD1P53065 400 aa5.99□□□□□ -1.45
SFB3YHR098C HOP2P53187 214 aa5.99□□□□□ -1.45
SFB3YHR098C ESBP6P53918 673 aa5.99□□□□□ -1.45
SFB3YHR098C NOP15P53927 220 aaPredicted RBP5.99□□□□□ -1.45
SFB3YHR098C GTB1Q04924 702 aa5.99□□□□□ -1.45
SFB3YHR098C ATG17Q06410 417 aa5.99□□□□□ -1.45
SFB3YHR098C VIP1Q06685 1146 aaKnown RBP5.99□□□□□ -1.45
SFB3YHR098C RIO1Q12196 484 aaKnown RBP5.99□□□□□ -1.45
SFB3YHR098C YAK1P14680 807 aa5.99□□□□□ -1.45
SFB3YHR098C YBL055CP34220 418 aaPredicted RBP5.99□□□□□ -1.45
SFB3YHR098C VMA22P38784 181 aa5.99□□□□□ -1.45
SFB3YHR098C SIP5P40210 489 aaKnown RBP5.99□□□□□ -1.45
SFB3YHR098C DAK2P43550 591 aa5.99□□□□□ -1.45
SFB3YHR098C RPC17P47076 161 aa5.99□□□□□ -1.45
SFB3YHR098C YML108WQ03759 105 aa5.99□□□□□ -1.45
SFB3YHR098C DON1Q05610 365 aa5.99□□□□□ -1.45
SFB3YHR098C RPN8Q08723 338 aaKnown RBP5.99□□□□□ -1.45
SFB3YHR098C DAS2Q12084 232 aa5.99□□□□□ -1.45
SFB3YHR098C RUP1Q12242 671 aa5.99□□□□□ -1.45
SFB3YHR098C TRM11Q12463 433 aa5.99□□□□□ -1.45
SFB3YHR098C ADR1P07248 1323 aa5.99□□□□□ -1.45
SFB3YHR098C ERG11P10614 530 aa5.98□□□□□ -1.45
SFB3YHR098C STI1P15705 589 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45not detected
SFB3YHR098C MIP1P15801 1254 aa5.98□□□□□ -1.45
SFB3YHR098C FAR1P21268 830 aa5.98□□□□□ -1.45
SFB3YHR098C MSB1P21339 1137 aaKnown RBP5.98□□□□□ -1.45
SFB3YHR098C RAD27P26793 382 aa5.98□□□□□ -1.45
SFB3YHR098C LYS14P40971 790 aa5.98□□□□□ -1.45
SFB3YHR098C NOP9P47077 666 aaKnown RBP5.98□□□□□ -1.45
SFB3YHR098C RFX1P48743 811 aa5.98□□□□□ -1.45
SFB3YHR098C CIK1Q01649 594 aa5.98□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 73.3 ms