RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C SFL1P20134 766 aa3.22□□□□□ -1.89
NMD2YHR077C CLB5P30283 435 aa3.22□□□□□ -1.89
NMD2YHR077C MUD1P32605 298 aaKnown RBP3.22□□□□□ -1.89
NMD2YHR077C YBR032WP38223 100 aa3.22□□□□□ -1.89
NMD2YHR077C YHL049CP38722 271 aa3.22□□□□□ -1.89
NMD2YHR077C YEL075CP39972 122 aa3.22□□□□□ -1.89
NMD2YHR077C YER189WP40104 122 aa3.22□□□□□ -1.89
NMD2YHR077C YFL064CP43540 174 aa3.22□□□□□ -1.89
NMD2YHR077C SAD1P43589 448 aa3.22□□□□□ -1.89
NMD2YHR077C DAS1P47005 663 aa3.22□□□□□ -1.89
NMD2YHR077C CPR7P47103 393 aa3.22□□□□□ -1.89
NMD2YHR077C CNM67P53865 581 aaKnown RBP3.22□□□□□ -1.89
NMD2YHR077C SQS1P53866 767 aaKnown RBP3.22□□□□□ -1.89
NMD2YHR077C YMR018WQ04364 514 aa3.22□□□□□ -1.89
NMD2YHR077C PNP1Q05788 311 aa3.22□□□□□ -1.89
NMD2YHR077C PIG1Q06216 648 aa3.22□□□□□ -1.89
NMD2YHR077C OPY2Q06810 360 aa3.22□□□□□ -1.89
NMD2YHR077C ACM1Q08981 209 aa3.22□□□□□ -1.89
NMD2YHR077C RIB2Q12362 591 aaKnown RBP3.22□□□□□ -1.89
NMD2YHR077C YBL111CQ3E7Y5 667 aa3.22□□□□□ -1.89
NMD2YHR077C ADE3P07245 946 aaKnown RBP3.22□□□□□ -1.89
NMD2YHR077C TKL1P23254 680 aaKnown RBP3.22□□□□□ -1.89
NMD2YHR077C PER1P25625 357 aa3.22□□□□□ -1.89
NMD2YHR077C YUR1P26725 428 aa3.22□□□□□ -1.89
NMD2YHR077C MRF1P30775 413 aaPredicted RBP3.22□□□□□ -1.89
NMD2YHR077C EUG1P32474 517 aa3.22□□□□□ -1.89
NMD2YHR077C COT1P32798 439 aa3.22□□□□□ -1.89
NMD2YHR077C NIP100P33420 868 aa3.22□□□□□ -1.89
NMD2YHR077C RRT2P38332 387 aa3.22□□□□□ -1.89
NMD2YHR077C SMC2P38989 1170 aaKnown RBP3.22□□□□□ -1.89
NMD2YHR077C ASG7P46993 209 aa3.22□□□□□ -1.89
NMD2YHR077C YNL146WP53906 100 aa3.22□□□□□ -1.89
NMD2YHR077C MTG1Q03151 367 aaPredicted RBP3.22□□□□□ -1.89
NMD2YHR077C GIN4Q12263 1142 aa3.22□□□□□ -1.89
NMD2YHR077C YML002WP0CF17 737 aa3.22□□□□□ -1.89
NMD2YHR077C DAL2P25335 343 aa3.22□□□□□ -1.89
NMD2YHR077C YCR051WP25631 222 aa3.22□□□□□ -1.89
NMD2YHR077C MRP4P32902 394 aa3.22□□□□□ -1.89
NMD2YHR077C RSM26P47141 266 aa3.22□□□□□ -1.89
NMD2YHR077C YML082WQ04533 649 aaKnown RBP3.22□□□□□ -1.89
NMD2YHR077C RGA2Q06407 1009 aa3.22□□□□□ -1.89
NMD2YHR077C TSR1Q07381 788 aaKnown RBP3.22□□□□□ -1.89
NMD2YHR077C SUB2Q07478 446 aaKnown RBP3.22□□□□□ -1.89
NMD2YHR077C AIM41Q12032 185 aa3.22□□□□□ -1.89
NMD2YHR077C ECM3Q99252 613 aa3.22□□□□□ -1.89
NMD2YHR077C RPS3P05750 240 aaKnown RBP3.21□□□□□ -1.9
NMD2YHR077C CHS2P14180 963 aa3.21□□□□□ -1.9
NMD2YHR077C PWP2P25635 923 aaKnown RBP3.21□□□□□ -1.9
NMD2YHR077C PLC1P32383 869 aa3.21□□□□□ -1.9
NMD2YHR077C REG2P38232 338 aa3.21□□□□□ -1.9
NMD2YHR077C SLI15P38283 698 aa3.21□□□□□ -1.9
NMD2YHR077C GDT1P38301 280 aaPredicted RBP3.21□□□□□ -1.9
NMD2YHR077C NPP2P39997 493 aa3.21□□□□□ -1.9
NMD2YHR077C RPN3P40016 523 aaKnown RBP3.21□□□□□ -1.9
NMD2YHR077C ASN1P49089 572 aaKnown RBP3.21□□□□□ -1.9
NMD2YHR077C ATG1P53104 897 aa3.21□□□□□ -1.9
NMD2YHR077C RTT102P53330 157 aa3.21□□□□□ -1.9
NMD2YHR077C EEB1Q02891 456 aa3.21□□□□□ -1.9
NMD2YHR077C CDC8P00572 216 aa3.21□□□□□ -1.9
NMD2YHR077C THS1P04801 734 aaKnown RBP3.21□□□□□ -1.9
NMD2YHR077C PRP16P15938 1071 aaPredicted RBP3.21□□□□□ -1.9
NMD2YHR077C TPS2P31688 896 aaKnown RBP3.21□□□□□ -1.9
NMD2YHR077C SEC21P32074 935 aaKnown RBP3.21□□□□□ -1.9
NMD2YHR077C SEC8P32855 1065 aa3.21□□□□□ -1.9
NMD2YHR077C CSG2P35206 410 aa3.21□□□□□ -1.9
NMD2YHR077C PBP2P38151 413 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
NMD2YHR077C MRX1P40050 688 aa3.21□□□□□ -1.9
NMD2YHR077C YTA12P40341 825 aa3.21□□□□□ -1.9
NMD2YHR077C SMC3P47037 1230 aa3.21□□□□□ -1.9
NMD2YHR077C RIO1Q12196 484 aaKnown RBP3.21□□□□□ -1.9
NMD2YHR077C YDR461C-AQ2V2P7 80 aa3.21□□□□□ -1.9
NMD2YHR077C SNF1P06782 633 aaKnown RBP3.2□□□□□ -1.9
NMD2YHR077C ILV2P07342 687 aaKnown RBP3.2□□□□□ -1.9
NMD2YHR077C GAL2P13181 574 aa3.2□□□□□ -1.9
NMD2YHR077C DBP5P20449 482 aaKnown RBP3.2□□□□□ -1.9
NMD2YHR077C NFU1P32860 256 aa3.2□□□□□ -1.9
NMD2YHR077C IXR1P33417 597 aa3.2□□□□□ -1.9
NMD2YHR077C BLI1P35727 113 aa3.2□□□□□ -1.9
NMD2YHR077C OCT1P35999 772 aa3.2□□□□□ -1.9
NMD2YHR077C TVP38P36164 337 aa3.2□□□□□ -1.9
NMD2YHR077C PAM1P37304 830 aaKnown RBP3.2□□□□□ -1.9
NMD2YHR077C UBP13P38187 747 aa3.2□□□□□ -1.9
NMD2YHR077C SPP381P38282 291 aaPredicted RBP3.2□□□□□ -1.9
NMD2YHR077C HIS2P38635 335 aa3.2□□□□□ -1.9
NMD2YHR077C KAP123P40069 1113 aaKnown RBP3.2□□□□□ -1.9
NMD2YHR077C PEA2P40091 420 aa3.2□□□□□ -1.9
NMD2YHR077C ALY2P47029 1046 aa3.2□□□□□ -1.9
NMD2YHR077C URB2P47108 1174 aa3.2□□□□□ -1.9
NMD2YHR077C MNP1P53163 194 aaPredicted RBP3.2□□□□□ -1.9
NMD2YHR077C SLG1P54867 378 aa3.2□□□□□ -1.9
NMD2YHR077C RPL22BP56628 122 aaKnown RBP3.2□□□□□ -1.9
NMD2YHR077C UFO1Q04511 668 aa3.2□□□□□ -1.9
NMD2YHR077C YLR177WQ06251 628 aa3.2□□□□□ -1.9
NMD2YHR077C SDH5Q08230 162 aa3.2□□□□□ -1.9
NMD2YHR077C KAR3P17119 729 aa3.2□□□□□ -1.9
NMD2YHR077C DEP1P31385 405 aa3.2□□□□□ -1.9
NMD2YHR077C EFT1P32324 842 aaKnown RBP3.2□□□□□ -1.9
NMD2YHR077C OAF3P36023 863 aa3.2□□□□□ -1.9
NMD2YHR077C SET3P36124 751 aa3.2□□□□□ -1.9
NMD2YHR077C YBR062CP38239 180 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms