RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA10	YHR039C-A	YKL222C	P35995	705 aa		4.03	□□□□□ -1.76
VMA10	YHR039C-A	PAF1	P38351	445 aa		4.03	□□□□□ -1.76
VMA10	YHR039C-A	MGS1	P40151	587 aa		4.03	□□□□□ -1.76
VMA10	YHR039C-A	CAF16	P43569	289 aa		4.03	□□□□□ -1.76
VMA10	YHR039C-A	EXG2	P52911	562 aa		4.03	□□□□□ -1.76
VMA10	YHR039C-A	NOG2	P53742	486 aa	Known RBP	4.03	□□□□□ -1.76
VMA10	YHR039C-A	RSC3	Q06639	885 aa		4.03	□□□□□ -1.76
VMA10	YHR039C-A	THI73	Q07904	523 aa		4.03	□□□□□ -1.76
VMA10	YHR039C-A	MET7	Q08645	548 aa		4.03	□□□□□ -1.76
VMA10	YHR039C-A	YCL002C	P25565	263 aa		4.02	□□□□□ -1.77
VMA10	YHR039C-A	PCL2	P25693	308 aa		4.02	□□□□□ -1.77
VMA10	YHR039C-A	DCG1	P32460	244 aa		4.02	□□□□□ -1.77
VMA10	YHR039C-A	SDP1	P40479	209 aa		4.02	□□□□□ -1.77
VMA10	YHR039C-A	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
VMA10	YHR039C-A	YGR237C	P50089	785 aa		4.02	□□□□□ -1.77
VMA10	YHR039C-A	TAD1	P53065	400 aa		4.02	□□□□□ -1.77
VMA10	YHR039C-A	GPG1	P53130	126 aa		4.02	□□□□□ -1.77
VMA10	YHR039C-A	SDA1	P53313	767 aa	Known RBP	4.02	□□□□□ -1.77
VMA10	YHR039C-A	UME1	Q03010	460 aa		4.02	□□□□□ -1.77
VMA10	YHR039C-A	YDR514C	Q04408	483 aa		4.02	□□□□□ -1.77
VMA10	YHR039C-A	RAD18	P10862	487 aa		4.01	□□□□□ -1.77
VMA10	YHR039C-A	KAR4	P25583	335 aa		4.01	□□□□□ -1.77
VMA10	YHR039C-A	STO1	P34160	861 aa	Known RBP	4.01	□□□□□ -1.77
VMA10	YHR039C-A	MCD4	P36051	919 aa		4.01	□□□□□ -1.77
VMA10	YHR039C-A	CTF8	P38877	133 aa		4.01	□□□□□ -1.77
VMA10	YHR039C-A	ATG36	P46983	293 aa		4.01	□□□□□ -1.77
VMA10	YHR039C-A	HXT16	P47185	567 aa		4.01	□□□□□ -1.77
VMA10	YHR039C-A	MET13	P53128	600 aa		4.01	□□□□□ -1.77
VMA10	YHR039C-A	PUS2	P53167	370 aa		4.01	□□□□□ -1.77
VMA10	YHR039C-A	LRS4	Q04087	347 aa	Known RBP	4.01	□□□□□ -1.77
VMA10	YHR039C-A	HAL9	Q12180	1030 aa		4.01	□□□□□ -1.77
VMA10	YHR039C-A	NUP145	P49687	1317 aa		4	□□□□□ -1.77
VMA10	YHR039C-A	PMA1	P05030	918 aa	Known RBP	4	□□□□□ -1.77
VMA10	YHR039C-A	SFL1	P20134	766 aa		4	□□□□□ -1.77
VMA10	YHR039C-A	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
VMA10	YHR039C-A	HCM1	P25364	564 aa		4	□□□□□ -1.77
VMA10	YHR039C-A	MRC1	P25588	1096 aa		4	□□□□□ -1.77
VMA10	YHR039C-A	TYS1	P36421	394 aa	Known RBP	4	□□□□□ -1.77
VMA10	YHR039C-A	PHO23	P50947	330 aa		4	□□□□□ -1.77
VMA10	YHR039C-A	SNP1	Q00916	300 aa	Predicted RBP	4	□□□□□ -1.77
VMA10	YHR039C-A	SLU7	Q02775	382 aa	Known RBP	4	□□□□□ -1.77
VMA10	YHR039C-A	COG8	Q04632	607 aa		4	□□□□□ -1.77
VMA10	YHR039C-A	REH1	Q06709	432 aa		4	□□□□□ -1.77
VMA10	YHR039C-A	GUP2	Q08929	609 aa		4	□□□□□ -1.77
VMA10	YHR039C-A	YOR022C	Q12204	715 aa		4	□□□□□ -1.77
VMA10	YHR039C-A	LAS17	Q12446	633 aa		4	□□□□□ -1.77
VMA10	YHR039C-A	PRC1	P00729	532 aa		3.99	□□□□□ -1.77
VMA10	YHR039C-A	PER1	P25625	357 aa		3.99	□□□□□ -1.77
VMA10	YHR039C-A	SEC21	P32074	935 aa	Known RBP	3.99	□□□□□ -1.77
VMA10	YHR039C-A	PCM1	P38628	557 aa	Known RBP	3.99	□□□□□ -1.77
VMA10	YHR039C-A	YJR008W	P47085	338 aa		3.99	□□□□□ -1.77
VMA10	YHR039C-A	DUS1	P53759	423 aa	Known RBP	3.99	□□□□□ -1.77
VMA10	YHR039C-A	FOL1	P53848	824 aa		3.99	□□□□□ -1.77
VMA10	YHR039C-A	TUB3	P09734	445 aa	Known RBP	3.98	□□□□□ -1.77
VMA10	YHR039C-A	PFK1	P16861	987 aa	Known RBP	3.98	□□□□□ -1.77
VMA10	YHR039C-A	CAD1	P24813	409 aa	Known RBP	3.98	□□□□□ -1.77
VMA10	YHR039C-A	HOG1	P32485	435 aa		3.98	□□□□□ -1.77
VMA10	YHR039C-A	SAP190	P36123	1033 aa		3.98	□□□□□ -1.77
VMA10	YHR039C-A	ENP1	P38333	483 aa	Known RBP	3.98	□□□□□ -1.77
VMA10	YHR039C-A	YHR078W	P38799	552 aa		3.98	□□□□□ -1.77
VMA10	YHR039C-A	MSS4	P38994	779 aa		3.98	□□□□□ -1.77
VMA10	YHR039C-A	RLP7	P40693	322 aa	Known RBP	3.98	□□□□□ -1.77
VMA10	YHR039C-A	GPP1	P41277	250 aa	Known RBP	3.98	□□□□□ -1.77
VMA10	YHR039C-A	MTQ2	Q03920	221 aa	Predicted RBP	3.98	□□□□□ -1.77
VMA10	YHR039C-A	ATG33	Q06485	197 aa		3.98	□□□□□ -1.77
VMA10	YHR039C-A	ENB1	Q08299	606 aa		3.98	□□□□□ -1.77
VMA10	YHR039C-A	FAP7	Q12055	197 aa	Predicted RBP	3.98	□□□□□ -1.77
VMA10	YHR039C-A	NTO1	Q12311	748 aa		3.98	□□□□□ -1.77
VMA10	YHR039C-A	TMA17	Q12513	150 aa		3.98	□□□□□ -1.77
VMA10	YHR039C-A	YBR182C-A	Q8TGU6	64 aa		3.98	□□□□□ -1.77
VMA10	YHR039C-A	HMG1	P12683	1054 aa		3.97	□□□□□ -1.77
VMA10	YHR039C-A	MIH1	P23748	554 aa		3.97	□□□□□ -1.77
VMA10	YHR039C-A	TRM2	P33753	639 aa		3.97	□□□□□ -1.77
VMA10	YHR039C-A	YJR096W	P47137	282 aa		3.97	□□□□□ -1.77
VMA10	YHR039C-A	YJR120W	P47157	116 aa		3.97	□□□□□ -1.77
VMA10	YHR039C-A	HFD1	Q04458	532 aa		3.97	□□□□□ -1.77
VMA10	YHR039C-A	PEX19	Q07418	342 aa		3.97	□□□□□ -1.77
VMA10	YHR039C-A	GUD1	Q07729	489 aa		3.97	□□□□□ -1.77
VMA10	YHR039C-A	THI21	Q08975	551 aa		3.97	□□□□□ -1.77
VMA10	YHR039C-A	SWM1	Q12379	170 aa		3.97	□□□□□ -1.77
VMA10	YHR039C-A	SET5	P38890	526 aa	Known RBP	3.96	□□□□□ -1.78
VMA10	YHR039C-A	CKB2	P38930	258 aa		3.96	□□□□□ -1.78
VMA10	YHR039C-A	SHR5	P41912	237 aa		3.96	□□□□□ -1.78
VMA10	YHR039C-A	ALY2	P47029	1046 aa		3.96	□□□□□ -1.78
VMA10	YHR039C-A	AIM14	P53109	570 aa		3.96	□□□□□ -1.78
VMA10	YHR039C-A	GIN4	Q12263	1142 aa		3.96	□□□□□ -1.78
VMA10	YHR039C-A	DIF1	O13577	133 aa		3.95	□□□□□ -1.78
VMA10	YHR039C-A	TUB2	P02557	457 aa	Known RBP	3.95	□□□□□ -1.78
VMA10	YHR039C-A	PRP4	P20053	465 aa	Known RBP	3.95	□□□□□ -1.78
VMA10	YHR039C-A	EUG1	P32474	517 aa		3.95	□□□□□ -1.78
VMA10	YHR039C-A	PRP19	P32523	503 aa	Known RBP	3.95	□□□□□ -1.78
VMA10	YHR039C-A	DEF1	P35732	738 aa	Known RBP	3.95	□□□□□ -1.78
VMA10	YHR039C-A	RPN10	P38886	268 aa	Known RBP	3.95	□□□□□ -1.78
VMA10	YHR039C-A	SAK1	P38990	1142 aa		3.95	□□□□□ -1.78
VMA10	YHR039C-A	PZF1	P39933	429 aa		3.95	□□□□□ -1.78
VMA10	YHR039C-A	VHR1	P40522	640 aa		3.95	□□□□□ -1.78
VMA10	YHR039C-A	SSY5	P47002	699 aa		3.95	□□□□□ -1.78
VMA10	YHR039C-A	RTS3	P53289	263 aa		3.95	□□□□□ -1.78
VMA10	YHR039C-A	ERG5	P54781	538 aa		3.95	□□□□□ -1.78
VMA10	YHR039C-A	NHX1	Q04121	633 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms